BGIOSGA035056

From RiceWiki
Revision as of 18:19, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA035056

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035056, complete gene.

LocusTag

OsI_35640

Ensembl Transcript ID

BGIOSGA035056-TA

Ensembl Protein ID

BGIOSGA035056-PA

Length

3463

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:6440654..6444116

Sequence Coding Region

6440654..6441486,6442064..6442096,6442619..6444116

Genome Context

<gbrowseImage1> name=IndicaChromosome11:6440654..6444116 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:6440654..6444116 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGAGGGGTTGTCGAGCAGATCGTGGTGAGCGCCCTAACGGGGGCGATGAGCCCTCTTCTCAGAAAACTCACCAACCTCATAGAGAAGAAGTACATGGAGGTCAAGGGCGTGAGGAAGAAGCTGGAACAGCTCACGAAGGAGCTGATGACCATCGGCATCGCGCTGGAGAAGTACGCGGCCATGGACAATCCAGACGTGCAGGTGAAGGCCTGGATGGTGGAGATGCACGAGTTGGCCTACGACATGGAGGATAGCATAGATCTCTTCACCTACCGTATCGACCATGAGCCAGCTGACACAACCAATGGAGTCAAGAGGGTTCTCCACAAGACCCTCCGCAAGGTGAAGAAGTTTCATCATCGCCACAAGTTTGCTAAGGAAATCGAGGAACTTCATGTTCTTGTAAATGAAGCGTACGAACGGCAAAAGAGGTATAGGATTGAAGAGGGCACTTCTAGCAAATTGTGTAGGGAGATTGATCCTCGGCTACCTGCCCTTTATGTGGAGAAGGAAAAACTCGTGGGCATCCAGGGTCCAATGAAGGAAATCATCAATTGGTTTGGTAGTGAGGAAGTGGAGCCAATAGGGCAGCGTAAGATTGTCTTTATTGTTGGACAAGGAGGTTTAGGAAAGACTACTCTCGCTAACCAGGTGTATCAGAAAATTAAAGGTCAATTCTCTTTTTCAGCTTTTGTGTCTGTATCGCAAAAGCCCAACATGGATAACCTTCTAAGGGAGTTGCTTTCTCAAATTAAGAGCAATGAACCAACGGAATCATATAGTGATCAACAACTTATCGACAAACTAAGAACATGTCTGAAAGATGAACGGTACCTTATTGTGATTGATGACATTTGGAAAAGTTGTTTACTGCACCTCGGTACGTTTCCTGAGGATCACAAGATTGGTAAGGATGTGCTGGTATGGAGATGGATAGCTGAAGGATTCATAACAAAAAAACAAGGCTTTACTTTGCAGGAAGTTGCAGAGAGTTATTTCTACGAGCTGATAAATAGGAGCTTGGTCCAACACATACAGATCATGCCAAATGGAGAAGATGGATGTCGAGTCCATGATATAGTTTTGAACTTCATCATCCATCAGTCAACTGAAGAAAATTTTTTAACCAAGTTGGATTGTCAGGATCACCCATCTTCACGTAAACGGATTCGCCGGCTTTTAGTTGGGAACAAAGAAGAATATACAAGGGCAAAATCACAAGGAACCATGAATTCGTCTAACCTTCGTTCAATTAACATATACCATGTTGATGGCCATATGATGTCTCCTCTTTTAAACCTACCTGCTCTTCGAGTGTTGAATCTAGAGCGTTGTGATCTCAGGAATAGTTATCTTGATTGCATTGTAGGTTTATTTCACCTAAGATACTTGGGGCTCCGTTGGTCAAGAATTGACTGCCTACCTGTCCAAATTGGGAAGCTAGAGTATCTGCAAACACTCGATTTACGCCATACTTCATTATTAGTGATGCCTGAAAGTATTGTTCAGCTCAAACGGTTGATGCGTCTTGTTGGACATCATCTCATATTGCCGGATGGGTTCGGTAACATGGAATCTCTTCAAGAATTAGGGTTTTTAGGTTGTTGTAGAAGCTCCACAAATTTATTAAAATTTCAGAAAGATCTACAACTTTTGAGAAATTTGAGGGTGCTCAAAGTAAGGTTCTTGTCTGAAGGGGAAACAGGAAAAGAAGCAATGATACCATCCCTTTGCAAGCTTGGAGGAAACAACCTCCGGGAAGTCTATATTACCAACTGCAATGGAAGTGGAGATTGTTTCGCAGATTCTTGGTGTCCTTCGCCGTGTTTCCTGGAAAAGTTTGTTTACAAGAGTAGTTGCGATATACATTACTTTTCCAGGTTTCCGAAGTGGATTCATCCCACACTCTCTAGATGTCTCACCTACTTGGATATCGACGTTAAACGAATGGAACGAGAACATGTACGTATTCTTGAAGATTTGCCTGCTCTTATTGTCCTACACCTAGACATAGGGGAAGCTCTCGTGTATGGAATCAGGATCAGCCATGGTGCATTCCAATGTTTGGCACGCCTACGTTTCTGCAACAGATTTGGACCTGGTTTGGTATTCAAAGGAGGCATGCCAAAGCTCGAATGGCTTAGCGTTGAATTCGGTGCAGAGAGGGCACAATCAACATATGGCAGTTTACAGGTTGGCATCCGGCACATCACATCTCTCAAACATATCGAGTTTTCTATCCTGGTGCTCACTGACGATATGGAGCGGAAAATCAAATCATCTATAAATAGCCAAGTCAAGATGCTTCCACAACGTCCTGAGGTCAATATCAAAACAGTACTCCTTCCATCTATAAAATAA</cdnaseq>

Protein Sequence

<aaseq>MGGVVEQIVVSALTGAMSPLLRKLTNLIEKKYMEVKGVRKKLEQLTKELMTIGIALEKYAAMDNPDVQVKAWMVEMHELAYDMEDSIDLFTYRIDHEPADTTNGVKRVLHKTLRKVKKFHHRHKFAKEIEELHVLVNEAYERQKRYRIEEGTSSKLCREIDPRLPALYVEKEKLVGIQGPMKEIINWFGSEEVEPIGQRKIVFIVGQGGLGKTTLANQVYQKIKGQFSFSAFVSVSQKPNMDNLLRELLSQIKSNEPTESYSDQQLIDKLRTCLKDERYLIVIDDIWKSCLLHLGTFPEDHKIGKDVLVWRWIAEGFITKKQGFTLQEVAESYFYELINRSLVQHIQIMPNGEDGCRVHDIVLNFIIHQSTEENFLTKLDCQDHPSSRKRIRRLLVGNKEEYTRAKSQGTMNSSNLRSINIYHVDGHMMSPLLNLPALRVLNLERCDLRNSYLDCIVGLFHLRYLGLRWSRIDCLPVQIGKLEYLQTLDLRHTSLLVMPESIVQLKRLMRLVGHHLILPDGFGNMESLQELGFLGCCRSSTNLLKFQKDLQLLRNLRVLKVRFLSEGETGKEAMIPSLCKLGGNNLREVYITNCNGSGDCFADSWCPSPCFLEKFVYKSSCDIHYFSRFPKWIHPTLSRCLTYLDIDVKRMEREHVRILEDLPALIVLHLDIGEALVYGIRISHGAFQCLARLRFCNRFGPGLVFKGGMPKLEWLSVEFGAERAQSTYGSLQVGIRHITSLKHIEFSILVLTDDMERKIKSSINSQVKMLPQRPEVNIKTVLLPSIK</aaseq>

Gene Sequence

<dnaseqindica>1..833#1411..1443#1966..3463#ATGGGAGGGGTTGTCGAGCAGATCGTGGTGAGCGCCCTAACGGGGGCGATGAGCCCTCTTCTCAGAAAACTCACCAACCTCATAGAGAAGAAGTACATGGAGGTCAAGGGCGTGAGGAAGAAGCTGGAACAGCTCACGAAGGAGCTGATGACCATCGGCATCGCGCTGGAGAAGTACGCGGCCATGGACAATCCAGACGTGCAGGTGAAGGCCTGGATGGTGGAGATGCACGAGTTGGCCTACGACATGGAGGATAGCATAGATCTCTTCACCTACCGTATCGACCATGAGCCAGCTGACACAACCAATGGAGTCAAGAGGGTTCTCCACAAGACCCTCCGCAAGGTGAAGAAGTTTCATCATCGCCACAAGTTTGCTAAGGAAATCGAGGAACTTCATGTTCTTGTAAATGAAGCGTACGAACGGCAAAAGAGGTATAGGATTGAAGAGGGCACTTCTAGCAAATTGTGTAGGGAGATTGATCCTCGGCTACCTGCCCTTTATGTGGAGAAGGAAAAACTCGTGGGCATCCAGGGTCCAATGAAGGAAATCATCAATTGGTTTGGTAGTGAGGAAGTGGAGCCAATAGGGCAGCGTAAGATTGTCTTTATTGTTGGACAAGGAGGTTTAGGAAAGACTACTCTCGCTAACCAGGTGTATCAGAAAATTAAAGGTCAATTCTCTTTTTCAGCTTTTGTGTCTGTATCGCAAAAGCCCAACATGGATAACCTTCTAAGGGAGTTGCTTTCTCAAATTAAGAGCAATGAACCAACGGAATCATATAGTGATCAACAACTTATCGACAAACTAAGAACATGTCTGAAAGATGAACGGTAAGTTTACTTGAGTTACTTTCTATCGTGTGCTTTCATACGGGTTCTTATATTCTAGTCATCATTAATCAACCCGTGCATCTCTCAGCCTGTAGCTAGATTAATATAAAAAGAACATTCAAAGTTCTTTTCATTTGGAATTTTCATTAAAGTTTCTTGTTGGAATTTTCTATCGTGGTCTCTCCTACACATCGATTTATATCCATGCCCTGCATAGTGGTGGTAGCCTTTCGTTTTTATTTTGTTTCTACCGATGATGAAGTTATATTCCTTCAAATAATCAAAATTATTTCAGGCTGAAATTAACCAACACAAAATGTAGTACAACTTTTGCATGCACAGATAGATTTACATGTATATAGATTGTTCACATGTACGTATGCAAAAATGAGAATGAGGATCCCCTGTACAGTTTGCAGTTATGCCACTGACATGTAGGCCATACCAAAGTGAGGCCCACATGTCAGTGGCACAACTGCAAACTGCATAAAGTCAGGGGATCTGTTTCCCAAAAATGAATATGGGTGCATTTATTAGCCTACAAATGATTCATTCTGCTTCACAAACTTGCTTATAGGTACCTTATTGTGATTGATGACATTTGGAAAAGGTCAGCATGGAAAACAATACAATGTGCTTTTCCTATAAACAAGCACGCAAGTAGAATAATCACAACAACGCGGATCAAAAGTGTAGCTCAATCTTGCTGCGGCGCTTCAGATGAGGGCTTTGTCTACCAGATGAAACCTCTTAACAAAAGTGACTCTGAAAATTTATTTCTCACAAGGACTTTTGGTGCTGAAAAAAAATTCCCCAGTCAGCTGGAAGGGATTATCAGTGATATACTTTATAAATGTGATGGTTTGCCTTTAGCCATTATTACTATAGCTAGCTTGTTAGCTGATAAACCAGAACAAGGGAAGAATGGGAGAGAGTTCTGAATTATATAGTTTCTACTAGTGAGAAGGATAATGACCTGGAGGTAATGGACAAGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTATGAGTTACAATGATCTACACATCATATGAAAAGTTGTTTACTGCACCTCGGTACGTTTCCTGAGGATCACAAGATTGGTAAGGATGTGCTGGTATGGAGATGGATAGCTGAAGGATTCATAACAAAAAAACAAGGCTTTACTTTGCAGGAAGTTGCAGAGAGTTATTTCTACGAGCTGATAAATAGGAGCTTGGTCCAACACATACAGATCATGCCAAATGGAGAAGATGGATGTCGAGTCCATGATATAGTTTTGAACTTCATCATCCATCAGTCAACTGAAGAAAATTTTTTAACCAAGTTGGATTGTCAGGATCACCCATCTTCACGTAAACGGATTCGCCGGCTTTTAGTTGGGAACAAAGAAGAATATACAAGGGCAAAATCACAAGGAACCATGAATTCGTCTAACCTTCGTTCAATTAACATATACCATGTTGATGGCCATATGATGTCTCCTCTTTTAAACCTACCTGCTCTTCGAGTGTTGAATCTAGAGCGTTGTGATCTCAGGAATAGTTATCTTGATTGCATTGTAGGTTTATTTCACCTAAGATACTTGGGGCTCCGTTGGTCAAGAATTGACTGCCTACCTGTCCAAATTGGGAAGCTAGAGTATCTGCAAACACTCGATTTACGCCATACTTCATTATTAGTGATGCCTGAAAGTATTGTTCAGCTCAAACGGTTGATGCGTCTTGTTGGACATCATCTCATATTGCCGGATGGGTTCGGTAACATGGAATCTCTTCAAGAATTAGGGTTTTTAGGTTGTTGTAGAAGCTCCACAAATTTATTAAAATTTCAGAAAGATCTACAACTTTTGAGAAATTTGAGGGTGCTCAAAGTAAGGTTCTTGTCTGAAGGGGAAACAGGAAAAGAAGCAATGATACCATCCCTTTGCAAGCTTGGAGGAAACAACCTCCGGGAAGTCTATATTACCAACTGCAATGGAAGTGGAGATTGTTTCGCAGATTCTTGGTGTCCTTCGCCGTGTTTCCTGGAAAAGTTTGTTTACAAGAGTAGTTGCGATATACATTACTTTTCCAGGTTTCCGAAGTGGATTCATCCCACACTCTCTAGATGTCTCACCTACTTGGATATCGACGTTAAACGAATGGAACGAGAACATGTACGTATTCTTGAAGATTTGCCTGCTCTTATTGTCCTACACCTAGACATAGGGGAAGCTCTCGTGTATGGAATCAGGATCAGCCATGGTGCATTCCAATGTTTGGCACGCCTACGTTTCTGCAACAGATTTGGACCTGGTTTGGTATTCAAAGGAGGCATGCCAAAGCTCGAATGGCTTAGCGTTGAATTCGGTGCAGAGAGGGCACAATCAACATATGGCAGTTTACAGGTTGGCATCCGGCACATCACATCTCTCAAACATATCGAGTTTTCTATCCTGGTGCTCACTGACGATATGGAGCGGAAAATCAAATCATCTATAAATAGCCAAGTCAAGATGCTTCCACAACGTCCTGAGGTCAATATCAAAACAGTACTCCTTCCATCTATAAAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035056