BGIOSGA035458

From RiceWiki
Revision as of 18:21, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA035458

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035458, complete gene.

LocusTag

OsI_36516

Ensembl Transcript ID

BGIOSGA035458-TA

Ensembl Protein ID

BGIOSGA035458-PA

Length

3220

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 11

Location

Chromosome 11:17888378..17891597

Sequence Coding Region

17888378..17890181,17890237..17890961,17891247..17891597

Genome Context

<gbrowseImage1> name=IndicaChromosome11:17888378..17891597 source=RiceIndica11 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome11:17888378..17891597 source=RiceIndica11 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGTCCCACTACCACCGCCGCTCTCCTGATCCTCAGCTTCCTCGCCGTCGCCGCCTTGGCCACGACCAACCATGAAGTGGAGGCGGCGGTGGCTGCGCTGCCACGCGGCGCCACACGCCGTCCGGCGCCCGCCCACGGCAACGTGGCGACGGCGGCCGGCTGCTCGCCGCGGGAGCGGGACGCGCTGCTGACGTTCAAGGCAGGCATCACCGAAGATATAATGGGTCTCCTCGACTCATGGAAGTACGACGGCGCTGGGCCTGGGCAGGCGGAGGAGGAGGCCGATTGCTGCCGGTGGCGAGGCGTCCGGTGCGGCGCCGGCGGCCATGTCGTCGGGCTTCACCTCCGCAACGTGTATGCCGACCAGAGCAACGACTACGACTTCATCACCTCCGGGTACGACCTGGCCGGCGAGATAAGTCCCTCTCTGCTCAACTTGACGTATCTGGAGCACATCGATCTCAGCAAGAACCAGCTCCAGGGACAGACCGGCCGTGTTCCGGAGTTCTTGGGCTCTCTGCAAAACTTGAGATATCTTAACCTCTCCGGCATACCATTTTCCGGTGAGGTGCCTCCCCAGCTGGGTAACCTCACAAATCTACACTATCTTGGCCTGTCAGATACAGGCATCAACTTCACGGATATCCAATGGTTAGCGCGCCTGCATTCTCTAACGCACCTCGACATGAGCCATACGAGCCTCAGCATGGTACATGATTGGGCCGATGTGATGAACAACATTCCTTCTCTCAAGGTCCTTCATCTTGCTTACTGCAACCTTGTTTATGCGGATCAATCTTTTTCACACTTTAACCTGACCAATCTTGAGGAGCTTGATCTCTCTGTCAACTATTTCAACCATCCAATTGCATCCTGTTGGTTCTGGAATGCACAAGGACTCAAGTACCTTAACCTTGGGTCGACCAAACTCTATGGCCAGTTTCCAAACGTTCCAGGACAATTTGGATCCCTACGATTTCTTGACTTGTCATCCACATGTAACATAGACATCGTGACAACAAACCTAACAAATCTATGCAACTTGAGAATCATACATCTCGAACGGAGTCAAATTCATGGGGACATTGCACAGTTGCTACAGAGATTACCGCGGTGCTCGTACAACAGATTGAATGAACTATATTTGTCAGACAATAATATATCAGGAATTCTACCAAATCGTCTGGATCACTTAACTAGCTTGGTCATTCTTGACATCTCTCATAACAAACTCTCTGGACCCTTGCCTCCTCAGATAGGCATGTTCAGTAATTTAACTTACTTGGACCTTAGCAGTAACAACCTCAACGGAGTGATCACAGATGAACACTTTACTAGTATGAGAAGTTTGAAGACATTGGACTTATCCGGTAATTCCTTGAAGATTTTGGTGGATTCAGAATGGTTACCTCTATTTAGTCTTGAGGTTGCATTGTTTTCACCTTGCCATATGGGCCCTCGCTTTCCCGGTTGGCTGAAACGACAGGTTAATATTACTTATCTTAATATGTCATTTGCGGGTATTACTGATAGGCTTCCAAACTGGTTTTCTACAACATTTTTGAATGCTCAACTTTTAGATGTTTCCAACAACGAAATCAATGGTAGCTTGCCAGCGAACATGGAGGTTATGACTACATTATCTAGACTATATATGGGATCAAACAAGCTTACCGGTCAAATACCTTTGTTGCCAAAAGCACTTGAAATAATGGACATCTCAAGGAACTCTTTATCAGGACCTCTGCCATCGAACTTTGGAGATGACCTTGCCTTATCTTATCTGCATCTCTTCTCCAATCATTTAGCGGACAATCTTTTGAAGGGAGAATTTCCTCGATGTTTCCAGCCAGTGTTTTTGAGTAAGCTATTTGTCAGCAACAATATTTTGTCCGGAAAGTTCCCGCCATTTTTGCGTAGTAGACATAATCTAGAGATGCTGGATTTGGCATCAAATGACTTCTATGGAGGATTGCCCATCTGGATTGGAGAGCTGTCGAATCTAGCAATAGTACGACTAAGCAATAACAATTTCTCTGGAAATATTCCAACAAGCATTACCAACCTTACAAGGCTTGTTCAACTAGATCTATCAAATAATTCTATTTCGGGTGTTTTACCTTTGCATTTGTCCAATTTAATATGTATGAAGAAAAGTGGTCATTGTGATATCGTAATGGTCTTCGATCGTTACTCAATTTCTGGTCGTTATGGTCGCAATGTTGGCATTGCAAATATGTCTGTGGACACCAAGGACCAAAAACTTTACTACAAACTACCCATAGTATTAGATATCGTGACCATTGATTTGTCTTTGAACTACTTAACTGGTGAAATTCCCGAGGAGCTAACTCTTCTCGATGGCATTAAAAATTTGAATTTATCATGGAATCAGCTTAGTGGAAGAATTCCAGGCAACATTAGTGTCATGCAATCATTGGAATCACTAGATCTCTCAAAAAACAATCTTTCTGGAGAAATCCCATCAAACCTATCAAAGATAACATCTCTAAGGGCACCCACAATGGAAGAATACCATCAGGGGGTCAACTCGACACCCTCTATGCGGAAAACCCGTCTATGTACAATGGAAACAATGGTCTTTGTGGGTATCCTCTTCGGAGAAATTGCTCAGACAACAGCAGTGCATCAAAGCATGGTGTTGAACAGAGAAGGGAAAGAGATTGAGCCAATGTTCTTGTACTCTGGACTTGGTTCAGGATTTGTGGCTGGTCTTTGGGTGGTTTTCTGTACCATCTTGTTCAAGAAAACATGGAGGATTGCTTACTTCCGCCTCTTCGACAAGGTGTATGACAAAGTGTATGTGTTTGTTGTTGTTACATGGGCAACCTTGTCTCAGAAGTCAGGCACACGTTAG</cdnaseq>

Protein Sequence

<aaseq>MRPTTTAALLILSFLAVAALATTNHEVEAAVAALPRGATRRPAPAHGNVATAAGCSPRERDALLTFKAGITEDIMGLLDSWKYDGAGPGQAEEEADCCRWRGVRCGAGGHVVGLHLRNVYADQSNDYDFITSGYDLAGEISPSLLNLTYLEHIDLSKNQLQGQTGRVPEFLGSLQNLRYLNLSGIPFSGEVPPQLGNLTNLHYLGLSDTGINFTDIQWLARLHSLTHLDMSHTSLSMVHDWADVMNNIPSLKVLHLAYCNLVYADQSFSHFNLTNLEELDLSVNYFNHPIASCWFWNAQGLKYLNLGSTKLYGQFPNVPGQFGSLRFLDLSSTCNIDIVTTNLTNLCNLRIIHLERSQIHGDIAQLLQRLPRCSYNRLNELYLSDNNISGILPNRLDHLTSLVILDISHNKLSGPLPPQIGMFSNLTYLDLSSNNLNGVITDEHFTSMRSLKTLDLSGNSLKILVDSEWLPLFSLEVALFSPCHMGPRFPGWLKRQVNITYLNMSFAGITDRLPNWFSTTFLNAQLLDVSNNEINGSLPANMEVMTTLSRLYMGSNKLTGQIPLLPKALEIMDISRNSLSGPLPSNFGDDLALSYLHLFSNHLADNLLKGEFPRCFQPVFLSKLFVSNNILSGKFPPFLRSRHNLEMLDLASNDFYGGLPIWIGELSNLAIVRLSNNNFSGNIPTSITNLTRLVQLDLSNNSISGVLPLHLSNLICMKKSGHCDIVMVFDRYSISGRYGRNVGIANMSVDTKDQKLYYKLPIVLDIVTIDLSLNYLTGEIPEELTLLDGIKNLNLSWNQLSGRIPGNISVMQSLESLDLSKNNLSGEIPSNLSKITSLRAPTMEEYHQGVNSTPSMRKTRLCTMETMVFVGILFGEIAQTTAVHQSMVLNREGKEIEPMFLYSGLGSGFVAGLWVVFCTILFKKTWRIAYFRLFDKVYDKVYVFVVVTWATLSQKSGTR</aaseq>

Gene Sequence

<dnaseqindica>1..1804#1860..2584#2870..3220#ATGCGTCCCACTACCACCGCCGCTCTCCTGATCCTCAGCTTCCTCGCCGTCGCCGCCTTGGCCACGACCAACCATGAAGTGGAGGCGGCGGTGGCTGCGCTGCCACGCGGCGCCACACGCCGTCCGGCGCCCGCCCACGGCAACGTGGCGACGGCGGCCGGCTGCTCGCCGCGGGAGCGGGACGCGCTGCTGACGTTCAAGGCAGGCATCACCGAAGATATAATGGGTCTCCTCGACTCATGGAAGTACGACGGCGCTGGGCCTGGGCAGGCGGAGGAGGAGGCCGATTGCTGCCGGTGGCGAGGCGTCCGGTGCGGCGCCGGCGGCCATGTCGTCGGGCTTCACCTCCGCAACGTGTATGCCGACCAGAGCAACGACTACGACTTCATCACCTCCGGGTACGACCTGGCCGGCGAGATAAGTCCCTCTCTGCTCAACTTGACGTATCTGGAGCACATCGATCTCAGCAAGAACCAGCTCCAGGGACAGACCGGCCGTGTTCCGGAGTTCTTGGGCTCTCTGCAAAACTTGAGATATCTTAACCTCTCCGGCATACCATTTTCCGGTGAGGTGCCTCCCCAGCTGGGTAACCTCACAAATCTACACTATCTTGGCCTGTCAGATACAGGCATCAACTTCACGGATATCCAATGGTTAGCGCGCCTGCATTCTCTAACGCACCTCGACATGAGCCATACGAGCCTCAGCATGGTACATGATTGGGCCGATGTGATGAACAACATTCCTTCTCTCAAGGTCCTTCATCTTGCTTACTGCAACCTTGTTTATGCGGATCAATCTTTTTCACACTTTAACCTGACCAATCTTGAGGAGCTTGATCTCTCTGTCAACTATTTCAACCATCCAATTGCATCCTGTTGGTTCTGGAATGCACAAGGACTCAAGTACCTTAACCTTGGGTCGACCAAACTCTATGGCCAGTTTCCAAACGTTCCAGGACAATTTGGATCCCTACGATTTCTTGACTTGTCATCCACATGTAACATAGACATCGTGACAACAAACCTAACAAATCTATGCAACTTGAGAATCATACATCTCGAACGGAGTCAAATTCATGGGGACATTGCACAGTTGCTACAGAGATTACCGCGGTGCTCGTACAACAGATTGAATGAACTATATTTGTCAGACAATAATATATCAGGAATTCTACCAAATCGTCTGGATCACTTAACTAGCTTGGTCATTCTTGACATCTCTCATAACAAACTCTCTGGACCCTTGCCTCCTCAGATAGGCATGTTCAGTAATTTAACTTACTTGGACCTTAGCAGTAACAACCTCAACGGAGTGATCACAGATGAACACTTTACTAGTATGAGAAGTTTGAAGACATTGGACTTATCCGGTAATTCCTTGAAGATTTTGGTGGATTCAGAATGGTTACCTCTATTTAGTCTTGAGGTTGCATTGTTTTCACCTTGCCATATGGGCCCTCGCTTTCCCGGTTGGCTGAAACGACAGGTTAATATTACTTATCTTAATATGTCATTTGCGGGTATTACTGATAGGCTTCCAAACTGGTTTTCTACAACATTTTTGAATGCTCAACTTTTAGATGTTTCCAACAACGAAATCAATGGTAGCTTGCCAGCGAACATGGAGGTTATGACTACATTATCTAGACTATATATGGGATCAAACAAGCTTACCGGTCAAATACCTTTGTTGCCAAAAGCACTTGAAATAATGGACATCTCAAGGAACTCTTTATCAGGACCTCTGCCATCGAACTTTGGAGATGACCTTGCCTTATCTTATCTGCATCTCTTCTCCAATCGTATCACTGGCCATATTCCAACTCTATGTGTGATTTGCATCACTTGTTTACTTAGATTTAGCGGACAATCTTTTGAAGGGAGAATTTCCTCGATGTTTCCAGCCAGTGTTTTTGAGTAAGCTATTTGTCAGCAACAATATTTTGTCCGGAAAGTTCCCGCCATTTTTGCGTAGTAGACATAATCTAGAGATGCTGGATTTGGCATCAAATGACTTCTATGGAGGATTGCCCATCTGGATTGGAGAGCTGTCGAATCTAGCAATAGTACGACTAAGCAATAACAATTTCTCTGGAAATATTCCAACAAGCATTACCAACCTTACAAGGCTTGTTCAACTAGATCTATCAAATAATTCTATTTCGGGTGTTTTACCTTTGCATTTGTCCAATTTAATATGTATGAAGAAAAGTGGTCATTGTGATATCGTAATGGTCTTCGATCGTTACTCAATTTCTGGTCGTTATGGTCGCAATGTTGGCATTGCAAATATGTCTGTGGACACCAAGGACCAAAAACTTTACTACAAACTACCCATAGTATTAGATATCGTGACCATTGATTTGTCTTTGAACTACTTAACTGGTGAAATTCCCGAGGAGCTAACTCTTCTCGATGGCATTAAAAATTTGAATTTATCATGGAATCAGCTTAGTGGAAGAATTCCAGGCAACATTAGTGTCATGCAATCATTGGAATCACTAGATCTCTCAAAAAACAATCTTTCTGGAGAAATCCCATCAAACCTATCAAAGATAACATCTCTAAGGGCACCCACAATGGTTATCTATAGGCTCTCTACAAGAGATCCATGGCAGCATATTTTCCTACTTGGAATGTATTAAATGAAGAGAGAGAGCAAAGCTATCTACTAACTTAGAGATAGTCTATAGAGAAAAACGAGGCAATGCATGAGAGAGCTATAGATACCAATGTAGACATACTATTAAGGTGGTTTACTATTAATCGAGTCTATTGCTGAGATGTACATGTTTTATAGATAGCATCTTACTTTACCATTGCGGGTGCTCTAAGCAGGCTAGACTTGTCATACAACCATCTCACAGGAAGAATACCATCAGGGGGTCAACTCGACACCCTCTATGCGGAAAACCCGTCTATGTACAATGGAAACAATGGTCTTTGTGGGTATCCTCTTCGGAGAAATTGCTCAGACAACAGCAGTGCATCAAAGCATGGTGTTGAACAGAGAAGGGAAAGAGATTGAGCCAATGTTCTTGTACTCTGGACTTGGTTCAGGATTTGTGGCTGGTCTTTGGGTGGTTTTCTGTACCATCTTGTTCAAGAAAACATGGAGGATTGCTTACTTCCGCCTCTTCGACAAGGTGTATGACAAAGTGTATGTGTTTGTTGTTGTTACATGGGCAACCTTGTCTCAGAAGTCAGGCACACGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035458