BGIOSGA032345

From RiceWiki
Revision as of 17:33, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA032345

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA032345, complete gene.

LocusTag

OSJNBA0020E23.11

Ensembl Transcript ID

BGIOSGA032345-TA

Ensembl Protein ID

BGIOSGA032345-PA

Length

2344

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:1648959..1651302

Sequence Coding Region

1651254..1651302,1650140..1651101),complement(1649258..1649413,1648959..1649156

Genome Context

<gbrowseImage1> name=IndicaChromosome10:1648959..1651302 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:1648959..1651302 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAACAGCCAGGTGTCCAAAGCTGACGCCTCCCAATCTCGAATTCGAGCTTCCACGCACGCGCACTACCTGTTCGACGAAACGCCTCTGCGACATGCTCGGCTTCCAGCCCGCGCCATGGAGGCGCCGCCTGTCAAGCGTGGGTGGCGGGTCATGGCCCCGGCGCACGCCGGCGGCAGGGAGGACCGGCTCAGCGACCTCCCCGAGGGTGTCCTCCACCGCGTCATGTCGTTCCTGGACTCGCGCCAGGCCGTGCGGACGTGCGTGCTGTCGCGGCGGTGGCGCGACGTCTGGCGCACCGTTCCCCGCGTCCACGCCGATTTCTGCGACTTCACTCTGAACTGGACCAGCGACGACGACGAGGTGGACGAAGCGGCCGTAGCGGAGGACGAGGTGGTGTTCAACAGGTTCGTCAACCGGCTGCTGGAGCTCCGTGATCCCAATGCCTCGATTCGATCGTTCTTCCTCAGATTCTGCAGATCGGATGGAGGCGATGATGGCTCAGCAGAAGGGAACAGATGGATCAGCTACGCTCTGCAGAAGAATGTCCGGGTTCTGGAGGTTGCCGTGCTGTCCCACGCATTGGAGCTCGATCACTCGGTGTTTTCATCGCGCTACCTGAGGACAATGGACTTCAGCAATGTCGTGATGAACCAAGGTTTCTTCAAGCAACTCGAGATGGGGTGTCCAGAATTGGAAGAGCTCTTCTTGGATGAATGTTTCATTGTGGATGATGAGATCTCCTCCCAGACACTGAAGGTTTTGACCCTCGATGCCACTCATTTCTGCTGTGGCTTCAAGACTTCCATTTCAAGTCCGAGTATTACTTCTCTGGCCTTGCACTATCCTATGAGTGGCAAACCTGTACTGAATGACATGGAAGCACTAATGAGCACGTCGATGCTGCTTTGTCGTGTGAAAGACGACGATTTTGCTGCTAATGATCTCCGCGACTATCTCTGGAGCCTTTATAATGTTGAAAATTTGGATTTCAGTTATCACGGGAAGAAGCTGACAATGGAAAATAATTTGCAATTGTGTCCGAAATTCATCAATCTTGTCAGTCTGACTCTCGGTCCATGGTGTCTGGATGCCAACTTCTATGGACTAATCGTCTTCCTTCAGAACTCACCAATATTGGAGAAGCTAACCCTAGAACTCGCAATGTATCGTACAGGAAAATTACAAAGAATCATTGGCCAGATTGAAGAAAGATCATTTACATGTGAGCACCTTACGAGTGTTGAAGTCATATGCTTGGAGGATGATCCCCTGGTCAACGACGTGGTCAACTTCTTTGTGAATAGTGGAATGTCCTCTGTTCAGATTCATATCAAACAATGGAGCCAGAGCGAGTATGAGTAA</cdnaseq>

Protein Sequence

<aaseq>MNSQVSKADASQSRIRASTHAHYLFDETPLRHARLPARAMEAPPVKRGWRVMAPAHAGGREDRLSDLPEGVLHRVMSFLDSRQAVRTCVLSRRWRDVWRTVPRVHADFCDFTLNWTSDDDEVDEAAVAEDEVVFNRFVNRLLELRDPNASIRSFFLRFCRSDGGDDGSAEGNRWISYALQKNVRVLEVAVLSHALELDHSVFSSRYLRTMDFSNVVMNQGFFKQLEMGCPELEELFLDECFIVDDEISSQTLKVLTLDATHFCCGFKTSISSPSITSLALHYPMSGKPVLNDMEALMSTSMLLCRVKDDDFAANDLRDYLWSLYNVENLDFSYHGKKLTMENNLQLCPKFINLVSLTLGPWCLDANFYGLIVFLQNSPILEKLTLELAMYRTGKLQRIIGQIEERSFTCEHLTSVEVICLEDDPLVNDVVNFFVNSGMSSVQIHIKQWSQSEYE</aaseq>

Gene Sequence

<dnaseqindica>1..49#202..1163#1890..2045#2147..2344#ATGAACAGCCAGGTGTCCAAAGCTGACGCCTCCCAATCTCGAATTCGAGGTATGCGCATGGCTCCCTCCTTCGATCGATCCGTTGTTTGTGTTCCTTGCACCTATCATCATCAGTTCATCCACAAATCTTTGCTTAGAATTGCATGCGGGCTCATGTCTGGTTGATTCTTGGTTGGTCTTGGGGGGTTTTTGTACGTGCAGCTTCCACGCACGCGCACTACCTGTTCGACGAAACGCCTCTGCGACATGCTCGGCTTCCAGCCCGCGCCATGGAGGCGCCGCCTGTCAAGCGTGGGTGGCGGGTCATGGCCCCGGCGCACGCCGGCGGCAGGGAGGACCGGCTCAGCGACCTCCCCGAGGGTGTCCTCCACCGCGTCATGTCGTTCCTGGACTCGCGCCAGGCCGTGCGGACGTGCGTGCTGTCGCGGCGGTGGCGCGACGTCTGGCGCACCGTTCCCCGCGTCCACGCCGATTTCTGCGACTTCACTCTGAACTGGACCAGCGACGACGACGAGGTGGACGAAGCGGCCGTAGCGGAGGACGAGGTGGTGTTCAACAGGTTCGTCAACCGGCTGCTGGAGCTCCGTGATCCCAATGCCTCGATTCGATCGTTCTTCCTCAGATTCTGCAGATCGGATGGAGGCGATGATGGCTCAGCAGAAGGGAACAGATGGATCAGCTACGCTCTGCAGAAGAATGTCCGGGTTCTGGAGGTTGCCGTGCTGTCCCACGCATTGGAGCTCGATCACTCGGTGTTTTCATCGCGCTACCTGAGGACAATGGACTTCAGCAATGTCGTGATGAACCAAGGTTTCTTCAAGCAACTCGAGATGGGGTGTCCAGAATTGGAAGAGCTCTTCTTGGATGAATGTTTCATTGTGGATGATGAGATCTCCTCCCAGACACTGAAGGTTTTGACCCTCGATGCCACTCATTTCTGCTGTGGCTTCAAGACTTCCATTTCAAGTCCGAGTATTACTTCTCTGGCCTTGCACTATCCTATGAGTGGCAAACCTGTACTGAATGACATGGAAGCACTAATGAGCACGTCGATGCTGCTTTGTCGTGTGAAAGACGACGATTTTGCTGCTAATGATCTCCGCGACTATCTCTGGAGCCTTTATAATGTTGAAAATTTGGATTTCAGTTATCACGGGAAGAAGGTATGCTTACTGATCTTACATATTTTCCCTTGTCTTATGTGCCCTAACTGTGGTATCAATGTGAAAAGGTGTGTTGATAGGGTGGATGATATTATCAACCATACCATTCAGTCCAATTTAGTTCATCTGTTCATGTACTCTGTCTATTTCTACATAAACGAACCTTAGTTAGCAATTTGATTTCACAAATGAAATTGGATCCATTTCCCGTTTGATGGCACAACATGTTCTTGTGTGGCTGCAATATTTGGTTTGGAAACTGAAAATGCATCCTGTCCAAAATCCAAGTGATTGTTTAACTTCAGTTGACATTACTGCACATTTACAGGAATTCTGCATATATATTTGAAAATTATGAGATATTCAAATCTCGAAGTCAAGAAATGAATGGAAAATGCTTCATCAATTTTCAAAAGTCTTATTCCTGCTGCTACCTCGTGATACTTGCATGGAAATATCCAGATAATTAATTCACACAAGCTCTATAAACTTCCATTGGAACTAAACAAGTATGTCATTGTTTAATCTGGTTTTTGGTAGCCATAATTTTTTTTTCTTGTAGTATTTTACTATGCATTATCTTGAAGCCATATTTGTACCTGTACTGCAACCAGAGTACTTATCACATAATGCCCATGTTCTCAATTTTGTTGCCATATTTTTTGAATATTTTTGTCTATAATATGGCATGGCTTTTATACACCACATAACTCCAATGTTGTGCAGCTGACAATGGAAAATAATTTGCAATTGTGTCCGAAATTCATCAATCTTGTCAGTCTGACTCTCGGTCCATGGTGTCTGGATGCCAACTTCTATGGACTAATCGTCTTCCTTCAGAACTCACCAATATTGGAGAAGCTAACCCTAGAACTCGCAATGGTAAATATTTTCCTCCAAATGTATACTGACCCTACTTGAAAGATTTTTGACAAGCACACATATCATCAGGAATATAGCTTACCTGTTTATTCTTGCTATAGTATCGTACAGGAAAATTACAAAGAATCATTGGCCAGATTGAAGAAAGATCATTTACATGTGAGCACCTTACGAGTGTTGAAGTCATATGCTTGGAGGATGATCCCCTGGTCAACGACGTGGTCAACTTCTTTGTGAATAGTGGAATGTCCTCTGTTCAGATTCATATCAAACAATGGAGCCAGAGCGAGTATGAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA032345