BGIOSGA031917

From RiceWiki
Revision as of 17:30, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA031917

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA031917, complete gene.

LocusTag

OsI_33586

Ensembl Transcript ID

BGIOSGA031917-TA

Ensembl Protein ID

BGIOSGA031917-PA

Length

2583

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 10

Location

Chromosome 10:12924128..12926710

Sequence Coding Region

12925543..12926710,12925307..12925432,12924517..12925152,12924128..12924345

Genome Context

<gbrowseImage1> name=IndicaChromosome10:12924128..12926710 source=RiceIndica10 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome10:12924128..12926710 source=RiceIndica10 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGAAAGCAAGGCGACGAGCGCGGCGGTGCTAGGGCGCGCGTGCTTGCCGGAGAGACGACCTCCCTCGCCGGCGACGCCGAAGAGGGGAGGTAATCGAGACGTTTCGATGGGTGGGAAATGGTGTTGGAATACCCATGGGTTAGCCCAAGGGCCCGACACTATTCACGCGGGCTGGAGTGGTGGGGCTCGTGGAATCCGCCATGGATGGTCCATGCATGATCTACTCCCGAGCCCGATTAAGGAGGTTTTTTTGTCTGCGAGCTGGGTGTGGGTGCCGAAAGGGGGTTCTCTGAGTCCTCATCTAGGGTTTCCAGCCACCAGGCGAGAGGTCGTGCATTTTGGGGCGACGACGAGGCGGATCTGGAGAGCTCCGGTGAGACTCACTGACGGGAGATCCTTCCTCGAGGTAGCGAAGGGAAGTATGGATCGTAAACCTCAATTCCAACATCCTGATCAATGGGTTCCCAATAAGAGAAGAGCGTTCGAAGAGGAGGGGGGAGGTGGGAATTGGGGGAATCGAAATTTGCAGGAAAGGGAGGAACATGAACTTCGGAATCGGTTGATGGGGCAACAACAACAGCGCGAGGAAGGGAGGTGGCAGCAAGTTGAGAGAAGGGGGGCCAACAAACAGTGGCAAGGAGACAGAAACAGGGAGGGTGGTGCTTGGGAGGGAGGGGATCGGCGTCCGACTCGTGGAAAGGAGAAGCTGGGGGAGGAAGGGAGATCAGGTCCTTCCCAGAAGGAAGAGATCAAGTGTTTCAACTGTGGAGAAAGTGGTTATCATCAGGTGAACTGTCAGAAACCTCCTCTGTGCTATGTCTGTAAGAATCCTGGACACATCTCATCTCATTGCCCTGTTCATGTTGGGGGGAGTAGCTCTAATTTGAGCAAACTAGAAGTAAAGCTAAAAGGTTATGGCATACCTGAGCAGGGTTTTTTCAGCCTAAATGTAGATAATTTAGGTGTGGCTGAGAAAGGGGCACAATTCAGAGGAATCCTAACTGTGGAGAAAGGGGCTGGTTCAGTGCAAAAGGTGGCCAATGAGATGTCTCATCTATTTAGGGAGAAAAATTGGGATTGGAATGTGAAGCAAATCAGCAGTAATAATTTCTTGATTGATTTCCCGAGTGAAGATGCTAGAAGACAAGTTACTAAGTCAGGGGGTTTCGCCAAAAAGCAGGAAATCATTAGAGCAATATCTGATATTGTGGGTGAATTTAAAGAAGTGGATGATAAATCTTTGAAGGGGGAAGGAGCTGTTAGGATAAAAGTGGGATGCTTGGACCCTAGAGGAAAGAAAGGTGGGGGGAAAGATGACAAAGGGAGTCCAAAGAAAAAGGAGCCTGCTAAAGATGCAGATGGCAAAGGGAGGATTGTCAGCCAGACTCAATCTACCTCTCCAGCTGTTAAAAGAAACTCTGAAAACTTGCAAAAGGCCATAATTCTGCAGGTGGAGAATGAGGTGGGGGTCACTGCTAAGGGTGAAGTTCTTATTGAAGCAACTGCTGTGGAGAAAAAGGCAGACAAGGCAGTGGTGCTATGGAAGTCAGAGGAATTTTCACAACCAGAACTGTTTGAGCAAGTTTCACAGGAGGAGGACAAAAGTGGTGACCTTCTCAAAAGAATGGATGTGGATTTAAAATTGGGGGGTGTTAGATTATTCACAGATGAAGAGGGGGAGAAGTGTGCTATCCCCGCTGACTCAGACATTGAGTTGATGAGGGCAGAGGAAGATGATGACAGTGAAGAACTAGATTTGGAAAGTGAAGCAGAGATACAGCTCAAGGAGGTTAACTTCCAGAAAGTCAGGCACAAGAAAAAGCAAGTTAGTTTGGTCAAGAGACAGAGTTCTAGGGTGAAGGATAAAGAGGTATCAGTTCATCTAAAAGCTGAGCTCAGGAAGTCCAAAATGAACATGACCTCAGATAAGAGATTACAACAGATGGCTGAAAAAGCAAGTTTGGAGGAAGAAGGGGGGCAGGAAGTCCCCCCCAATGAGAATAGTGTAATTCTGGGGGTTTCTATGGTAGAAATGGAGAATGATCAGTATGTTGAGGGCCTGAAGGAGGAAGATAGGGATGAGTTGGATGATGCAGATAAAGAGAGTTCTGATAATCTGGGGGATTTTGACTTGCATGACTAG</cdnaseq>

Protein Sequence

<aaseq>MAESKATSAAVLGRACLPERRPPSPATPKRGGNRDVSMGGKWCWNTHGLAQGPDTIHAGWSGGARGIRHGWSMHDLLPSPIKEVFLSASWVWVPKGGSLSPHLGFPATRREVVHFGATTRRIWRAPVRLTDGRSFLEVAKGSMDRKPQFQHPDQWVPNKRRAFEEEGGGGNWGNRNLQEREEHELRNRLMGQQQQREEGRWQQVERRGANKQWQGDRNREGGAWEGGDRRPTRGKEKLGEEGRSGPSQKEEIKCFNCGESGYHQVNCQKPPLCYVCKNPGHISSHCPVHVGGSSSNLSKLEVKLKGYGIPEQGFFSLNVDNLGVAEKGAQFRGILTVEKGAGSVQKVANEMSHLFREKNWDWNVKQISSNNFLIDFPSEDARRQVTKSGGFAKKQEIIRAISDIVGEFKEVDDKSLKGEGAVRIKVGCLDPRGKKGGGKDDKGSPKKKEPAKDADGKGRIVSQTQSTSPAVKRNSENLQKAIILQVENEVGVTAKGEVLIEATAVEKKADKAVVLWKSEEFSQPELFEQVSQEEDKSGDLLKRMDVDLKLGGVRLFTDEEGEKCAIPADSDIELMRAEEDDDSEELDLESEAEIQLKEVNFQKVRHKKKQVSLVKRQSSRVKDKEVSVHLKAELRKSKMNMTSDKRLQQMAEKASLEEEGGQEVPPNENSVILGVSMVEMENDQYVEGLKEEDRDELDDADKESSDNLGDFDLHD</aaseq>

Gene Sequence

<dnaseqindica>1..1168#1279..1404#1559..2194#2366..2583#ATGGCAGAAAGCAAGGCGACGAGCGCGGCGGTGCTAGGGCGCGCGTGCTTGCCGGAGAGACGACCTCCCTCGCCGGCGACGCCGAAGAGGGGAGGTAATCGAGACGTTTCGATGGGTGGGAAATGGTGTTGGAATACCCATGGGTTAGCCCAAGGGCCCGACACTATTCACGCGGGCTGGAGTGGTGGGGCTCGTGGAATCCGCCATGGATGGTCCATGCATGATCTACTCCCGAGCCCGATTAAGGAGGTTTTTTTGTCTGCGAGCTGGGTGTGGGTGCCGAAAGGGGGTTCTCTGAGTCCTCATCTAGGGTTTCCAGCCACCAGGCGAGAGGTCGTGCATTTTGGGGCGACGACGAGGCGGATCTGGAGAGCTCCGGTGAGACTCACTGACGGGAGATCCTTCCTCGAGGTAGCGAAGGGAAGTATGGATCGTAAACCTCAATTCCAACATCCTGATCAATGGGTTCCCAATAAGAGAAGAGCGTTCGAAGAGGAGGGGGGAGGTGGGAATTGGGGGAATCGAAATTTGCAGGAAAGGGAGGAACATGAACTTCGGAATCGGTTGATGGGGCAACAACAACAGCGCGAGGAAGGGAGGTGGCAGCAAGTTGAGAGAAGGGGGGCCAACAAACAGTGGCAAGGAGACAGAAACAGGGAGGGTGGTGCTTGGGAGGGAGGGGATCGGCGTCCGACTCGTGGAAAGGAGAAGCTGGGGGAGGAAGGGAGATCAGGTCCTTCCCAGAAGGAAGAGATCAAGTGTTTCAACTGTGGAGAAAGTGGTTATCATCAGGTGAACTGTCAGAAACCTCCTCTGTGCTATGTCTGTAAGAATCCTGGACACATCTCATCTCATTGCCCTGTTCATGTTGGGGGGAGTAGCTCTAATTTGAGCAAACTAGAAGTAAAGCTAAAAGGTTATGGCATACCTGAGCAGGGTTTTTTCAGCCTAAATGTAGATAATTTAGGTGTGGCTGAGAAAGGGGCACAATTCAGAGGAATCCTAACTGTGGAGAAAGGGGCTGGTTCAGTGCAAAAGGTGGCCAATGAGATGTCTCATCTATTTAGGGAGAAAAATTGGGATTGGAATGTGAAGCAAATCAGCAGTAATAATTTCTTGATTGATTTCCCGAGTGAAGATGCTAGAAGACAAGTTACTAAGTCAGGGGGTTTGTGTTTAAGACCTCATCCATCAAAGCTAGTGTAATAGAATCTAAGATGACTGACAATGCTGTGGATGAGCTCTTTGTGATCTGGGTAAAAGTTTTTGGTCTTCTAGGTTTCGCCAAAAAGCAGGAAATCATTAGAGCAATATCTGATATTGTGGGTGAATTTAAAGAAGTGGATGATAAATCTTTGAAGGGGGAAGGAGCTGTTAGGATAAAAGTGGGATGCTTGGACCCTAGTGCTATCAACTATTCTGTCATAATATATATTAATGACATTGGATATAAGATAAAATGGGAGGCAGAGGTTGATACAGAGGGGACAGGGTCTATTGATGGGGGGGGACAATGATGATGATGATGCTGATGATCTGGATGATGATTACCCTCCAGGAGGAAAGAAAGGTGGGGGGAAAGATGACAAAGGGAGTCCAAAGAAAAAGGAGCCTGCTAAAGATGCAGATGGCAAAGGGAGGATTGTCAGCCAGACTCAATCTACCTCTCCAGCTGTTAAAAGAAACTCTGAAAACTTGCAAAAGGCCATAATTCTGCAGGTGGAGAATGAGGTGGGGGTCACTGCTAAGGGTGAAGTTCTTATTGAAGCAACTGCTGTGGAGAAAAAGGCAGACAAGGCAGTGGTGCTATGGAAGTCAGAGGAATTTTCACAACCAGAACTGTTTGAGCAAGTTTCACAGGAGGAGGACAAAAGTGGTGACCTTCTCAAAAGAATGGATGTGGATTTAAAATTGGGGGGTGTTAGATTATTCACAGATGAAGAGGGGGAGAAGTGTGCTATCCCCGCTGACTCAGACATTGAGTTGATGAGGGCAGAGGAAGATGATGACAGTGAAGAACTAGATTTGGAAAGTGAAGCAGAGATACAGCTCAAGGAGGTTAACTTCCAGAAAGTCAGGCACAAGAAAAAGCAAGTTAGTTTGGTCAAGAGACAGAGTTCTAGGGTGAAGGATAAAGAGGTATCAGTTCATCTAAAAGCTGAGCTCAGGAAGTCCAAAATGAACATGACCTCAGGTATGTCATCAAAAAATTCTTATGCAATCTTTCAATCTGTTAGTCAGGATTATATTATCAATATTGCTAGGGCTAGGGGAATCTCTTAAGGTGACAATTCTGTGGAAGTGAGATGCAACTTAGATGCTATTTGTGCTAGGGAATTGGCACAGGCTGCTATTTTTGATGCAGATAAGAGATTACAACAGATGGCTGAAAAAGCAAGTTTGGAGGAAGAAGGGGGGCAGGAAGTCCCCCCCAATGAGAATAGTGTAATTCTGGGGGTTTCTATGGTAGAAATGGAGAATGATCAGTATGTTGAGGGCCTGAAGGAGGAAGATAGGGATGAGTTGGATGATGCAGATAAAGAGAGTTCTGATAATCTGGGGGATTTTGACTTGCATGACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031917