BGIOSGA002659

From RiceWiki
Revision as of 18:18, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA002659

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002659, complete gene.

LocusTag

OsI_00162

Ensembl Transcript ID

BGIOSGA002659-TA

Ensembl Protein ID

BGIOSGA002659-PA

Length

3472

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:1294076..1297547

Sequence Coding Region

1294076..1294132,1294635..1294703,1295043..1295111,1295530..1295592,1295670..1295747
,1296268..1296503,1296593..1297343,1297422..1297547

Genome Context

<gbrowseImage1> name=IndicaChromosome01:1294076..1297547 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:1294076..1297547 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCTCACGCATGGATGGAGGAGTTTTCCGGGGACTCTACGCTGTGCAGGAACAAGCTAAGCATAAACCCATTGAAAGAGACTGACATGATTTTGCTTGAGAGGGGATTCTGCCACTGTGAGAAGCAGAAGAACCATCAGCAATGTCAGCAACAAGCTGCTCACAGTCCAAAGTCGATGGTGCAGAAGCCTGAGTGGAACACGCATGAGGAGGTGAAGGAGGTCCCTGCACCATCTTCCTACCTGCATAAGTCCTCGAACACGCAGGAGGAGGTGAAGGAAGTCCATGTGAAGGAGAATGTCCCTGCACCATCTTCTTACTTGCTCAAGTCATCGGGGTTAAAATCATTATTTGTGAAGGCTTCTGGTGTTAGTGTATCCATACAAGTAGATGTATCTAACACAAAAGTTGATTATCTGATCAATTCTGCCTGTGAAAAGTTAGGTGTCAAAGCTCAGGATACCTATGCAGTGTTGTGCGGTAAAGTTTTAGACTATGATAAATCATTGTCGGAGTACCTATTGTATCAAAACTCAACCGTTGAAATCCGCTATCGAGGAAGAGCTGGACAGCTAAATTGGGATAAAAAATTCAATGTTAATGATACAGTTCTGTATTATGATGTTAACTTAGATCCAGCTCTTCAAAATGCTGGAATCCAGGCATTCCAATATGCACGGTTTTTCTCGGATTTTTCCTCATACAATATTCAGAAGGTGTTGATGCATGTTACTGAACAACATCGTGCAGGGTGGAGTTATGATGGGGGTTTTAATAGCCAGAACATTATCTTTCATGATGGCGCAGTTAGTATAGAAAATATCCCTGTAGTGGCATTTGATAAAGATCCATGTGCTCGGGATTATACTAGTCTCTACAATATATTCTCTACAAGGTTTGGACCAGTGTATCCAGTACATTTCGATCATCTCCTTGAATTCCTAAGAACATGTCCTTGTGGGGTGAACTCCAGAAAAGATGCAATAGTTGCGTTTGTCACAAATCATCCTAGTATTGAAACATATGTTGATAGGATGAAACAATTGATGATTTTAGACAATGTGGTACATAGACACCCTGCACATCTTCAGGCTAATATACAAGCTATGGCAGCATATGCTTCACACGCTAGTTTAAGAGCTAGTATGGGACCATATGCATATGCTTGGAAAGGTTCTGCGCAGCTTGTTCCTGAACTCAATAATGTTCTTATCTATCAACCACCCGGGAAACCATTACAATGGAAAAATCCCTTATATACTGATAATGCAAAAGGTTGTCTGCATTTTGCCAATAATTTTTTGAAGCATGCAAGAAACAGGTTCCCAGAAGAACAAATTGAGGCAGCATTTGCTCTACACATGAAAAATTTCCTGCCAAAGATATTACAGGGACTAGCTGAACTTGCTGATCGCACCCCAAACAGACAATACATCAATGACATGTAA</cdnaseq>

Protein Sequence

<aaseq>MAHAWMEEFSGDSTLCRNKLSINPLKETDMILLERGFCHCEKQKNHQQCQQQAAHSPKSMVQKPEWNTHEEVKEVPAPSSYLHKSSNTQEEVKEVHVKENVPAPSSYLLKSSGLKSLFVKASGVSVSIQVDVSNTKVDYLINSACEKLGVKAQDTYAVLCGKVLDYDKSLSEYLLYQNSTVEIRYRGRAGQLNWDKKFNVNDTVLYYDVNLDPALQNAGIQAFQYARFFSDFSSYNIQKVLMHVTEQHRAGWSYDGGFNSQNIIFHDGAVSIENIPVVAFDKDPCARDYTSLYNIFSTRFGPVYPVHFDHLLEFLRTCPCGVNSRKDAIVAFVTNHPSIETYVDRMKQLMILDNVVHRHPAHLQANIQAMAAYASHASLRASMGPYAYAWKGSAQLVPELNNVLIYQPPGKPLQWKNPLYTDNAKGCLHFANNFLKHARNRFPEEQIEAAFALHMKNFLPKILQGLAELADRTPNRQYINDM</aaseq>

Gene Sequence

<dnaseqindica>1..57#560..628#968..1036#1455..1517#1595..1672#2193..2428#2518..3268#3347..3472#ATGGCTCACGCATGGATGGAGGAGTTTTCCGGGGACTCTACGCTGTGCAGGAACAAGGTAACTCTTCTTGTACACGTCATCCGTGGTGTTTCTTGGTTCTGTCTTGTGTGTCTCCTTAGATCTACTTAGGGCTCCCTCACAAAATAGACCTATTTTCTTTCTTTCTTGTTCAAATATACCTCCTCCCCGCCTGCCTTCGGATGCGACCGAGAATGAAATCTGTTGTTCCCAAGTGTGATGCAAACATGCTGCTGCTAATTTTTTTTTAATGCATTGGGTTTTGTCTTATTAACAAGATTTTGGGTAAAGATGGTACGGCGCTTCGTCTTACTAAGATCAATCTCATGTTCGTTCTGCTATATGCTATTGTTTATGCTCTTTTGTTGATTCTTTTGTTTGGGTTGTCTTGGTAACGCAGGAGGAGGTGAAAGATGTCTTGCTTGCTCAAGTCTTCGGTAAAAAAAGAACCCTCTAATTTTCAAGTTAGGCGTAAATTTGTCTACTTTTCCAACTCACGGTTTAGTTATAAAGTATGACATAATTTCTTTCTTTTTTGCAGCTAAGCATAAACCCATTGAAAGAGACTGACATGATTTTGCTTGAGAGGGGATTCTGCCACTGTGAGAAGGTTTGAACCACATCTTCTATGATTTAGTTACGGGCATTCTATTTTGTATATGCTCTTTAACTTCTCGAGGTTTTCAAGTATAGCTTCCCATGCTAATTTAATACTTTGTCTCGGGGATGTTTTGTTGGAATCAGACATTATTTCTTATGCCTGCACAATTGATGACTGATGTATCCTGCACACACCTCTTAGTTAAGCAATGTGTATGTACATAATTAACATGTAATGCCGTATCTTCCTCTATTTCAAATTTGTTATAGAGATTTATTTTTTCTCTTTTTAGGGGGAAGAACTACCAAAAAAAATCAACAGGAACCACCACCGCATCAACTTTTACAGCAGAAGAACCATCAGCAATGTCAGCAACAAGCTGCTCACAGTCCAAAGTCGATGGTGCAGAAGCCTGAGGTACGTTGCTACTTTAACACCGTGAAATGGATCGTATCTGGTTTGCGTCCAATCGGGTGTTGCGAGTAGCGACACTTTGAAACGGGACGTGCATCTCTTCTTCTTCTTCTGTAGGCTGTAGCTAGTAACTCGTGATGGCGATCTAATCCTTTCCCCATTTCGTTCGCCCAGCTGTTGCTTCTGGGATCACCATGGCATGTCATGTATGGTGCTGGTTTTCTTCTTTGTTTTAAGGAGAGAATTTGCATAGACTGATCAAGTCTACTGTGAGGGACCCACGTTTCACATTTTTTATAAACTTGATTAAATTTAAAAATGTTTGGCTAAGGAAAAAGTATAAACTACTTATAACATGAAACGGGGAAATATTGTTTATGCTCTTTTGCTGATTTCTTCCTTTTGGTTGTCTTGACTGCAGTGGAACACGCATGAGGAGGTGAAGGAGGTCCCTGCACCATCTTCCTACCTGCATAAGTCCTCGGTAAAAAAGACCCCCTCTATTTTACAAGTCAGCCATAAATTTGTCTACTTTCCTTTGGGTTGTCCTGAATGTAGTAGAACACGCAGGAGGAGGTGAAGGAAGTCCATGTGAAGGAGAATGTCCCTGCACCATCTTCTTACTTGCTCAAGTCATCGGTAAAAAAGATCCCACTAATTCTCAAGTCAACCATAAATTTGTCTACTTTTTGGGCCCGGTTTAGTTACAAAGTAGTATGACCTATTTTTTTATTTCTACATCTAACCATAAGTATCTTGGATTTTCAATTTTTAACCTAGAGAGAAATGTTAAATCTAATCCGTATACATGATTATAATCTGTAAACATCTTAAAGTAATGTGTGCGCCACTTCTTTTAATGCACTGTTGCTCTTCATCTTAAGTAAGGTGCACGTACATAATTATCTTCATCTTAAGTAATGTGCACGTACATAATTATCTTGGATTTTCAATTTTTAACCTAAAGGGAAATGTTGAAACTAATTTGTGTACATGATAATAATATGTAGACAACTTAGAGTAATGTGTGCGCCACTTTTAATACTGCACATCAACTTACTAACAAGATTTATTCAATCTCGCATTCAAATAAATCTCGCATTCATTGTTTGTTGTGATATGCTGTTATTTATGCTCTTTTGCCGTTATTTCTCTGCAGGGGTTAAAATCATTATTTGTGAAGGCTTCTGGTGTTAGTGTATCCATACAAGTAGATGTATCTAACACAAAAGTTGATTATCTGATCAATTCTGCCTGTGAAAAGTTAGGTGTCAAAGCTCAGGATACCTATGCAGTGTTGTGCGGTAAAGTTTTAGACTATGATAAATCATTGTCGGAGTACCTATTGTATCAAAACTCAACCGTTGAAATCCGCTATCGAGGAAGAGCTGGACAGTGAGTATTATCTATTTAAAATTGTTAATTTTTTTATTTGTACATGTCTATAACATTGTAACATTTTGTAACATTGTGTTTTGCTGTAGGCTAAATTGGGATAAAAAATTCAATGTTAATGATACAGTTCTGTATTATGATGTTAACTTAGATCCAGCTCTTCAAAATGCTGGAATCCAGGCATTCCAATATGCACGGTTTTTCTCGGATTTTTCCTCATACAATATTCAGAAGGTGTTGATGCATGTTACTGAACAACATCGTGCAGGGTGGAGTTATGATGGGGGTTTTAATAGCCAGAACATTATCTTTCATGATGGCGCAGTTAGTATAGAAAATATCCCTGTAGTGGCATTTGATAAAGATCCATGTGCTCGGGATTATACTAGTCTCTACAATATATTCTCTACAAGGTTTGGACCAGTGTATCCAGTACATTTCGATCATCTCCTTGAATTCCTAAGAACATGTCCTTGTGGGGTGAACTCCAGAAAAGATGCAATAGTTGCGTTTGTCACAAATCATCCTAGTATTGAAACATATGTTGATAGGATGAAACAATTGATGATTTTAGACAATGTGGTACATAGACACCCTGCACATCTTCAGGCTAATATACAAGCTATGGCAGCATATGCTTCACACGCTAGTTTAAGAGCTAGTATGGGACCATATGCATATGCTTGGAAAGGTTCTGCGCAGCTTGTTCCTGAACTCAATAATGTTCTTATCTATCAACCACCCGGGAAACCATTACAATGGAAAAATCCCTTATATACTGATAATGCAAAAGGTTGTCTGCATTTTGCCAATAATTTTTTGAAGCATGCAAGAAACAGGGTTAGTATAATACTTACTCCATTATTTTTTCACTAGTGAAAACATATTTATGTCTAACACTGTTTTTTCACTAAACAGTTCCCAGAAGAACAAATTGAGGCAGCATTTGCTCTACACATGAAAAATTTCCTGCCAAAGATATTACAGGGACTAGCTGAACTTGCTGATCGCACCCCAAACAGACAATACATCAATGACATGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002659