BGIOSGA002782

From RiceWiki
Revision as of 18:19, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA002782

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002782, complete gene.

LocusTag

OsI_00401

Ensembl Transcript ID

BGIOSGA002782-TA

Ensembl Protein ID

BGIOSGA002782-PA

Length

2071

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:3105947..3108017

Sequence Coding Region

3105947..3106357,3107448..3108017

Genome Context

<gbrowseImage1> name=IndicaChromosome01:3105947..3108017 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:3105947..3108017 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGATGACGAGAAGGAGGACGACGCCGCACCGCTGTGCTATCCCCGTGCTGACAACCTCCACGCCGCTCGTCCTCAAAGACGCCGACCTTCTCCCCATCGACAGCGGCGGCTACCCCAAATCCTCCCTATCAAGGACGGCGCCACACCGTTGTGCTGTCCCCATGCTAGCAATCTCCACGCCGTTCGTCCTTGACGACGCCGACCTCCTCCCCACGACAGCGGTGGTCACCCCAAATCCTCTGGCGCGATGTTGCAGACGTCGTCTCGCGTCTTCGCCGCGCACCCTGGGCCGTTCTAGTGCATCCGCCCGTGGTGACGACGCTCCTCCTTTTCCTCTCCCTCGTCGTCCTCCACTCCCACCTCTACTTGTCTGTGAGGCTGTGCCATCGGTGGTCGACGGCGGGGCGGGGGGAGAGGGCACACAAACGAGGATACTAGGGGGAGGGGAAGGAGAAGAGGTTGCTATCCGCGCCGCGCGCACCGACGAGTGGGGGGTGGGGGGGAGGTGTGGCGCCGACGAGGTCGTGCCTGCCTACTGCCGCTGCAGCCTGCGCCGCCAGCCGCCACCGGCCACCGGGTCCAGCGCTCCCCGCCGCCCCTTTCCAGACAGGCCGCGGGAGGGCCAGCACCGTCGCGCCCACTTCGGCCTCCACCTTGCTGGCCGCCAGCACAAGCGCCGCCGCTCCGCCTCCTCCGCGCCCCGTCACACCGTCGCGAACGGCAGTGACGCTCGTCTCCGGCGGCAGGGCGCCGGATCCAGCCACGGGGGTGCCGGATCCGAAGCTTCGCACTGCGCCATCGCCGTCGCCGTTGCCCGCCCATCGCACGCCGCGTCGTCGTCCTCGTGCAGAGCCGTCGCGTCATCGCCGGAGGAAAGGCCTCGCCACCGCCCTCACGGTTGGCCGCACGGAACTCCGGCGGCGCGCTCCGGCGGCGGCGAGGGGTGGAAGAGAAAGGGAGGGGGTGGCGAGGGCTAG</cdnaseq>

Protein Sequence

<aaseq>MGMTRRRTTPHRCAIPVLTTSTPLVLKDADLLPIDSGGYPKSSLSRTAPHRCAVPMLAISTPFVLDDADLLPTTAVVTPNPLARCCRRRLASSPRTLGRSSASARGDDAPPFPLPRRPPLPPLLVCEAVPSVVDGGAGGEGTQTRILGGGEGEEVAIRAARTDEWGVGGRCGADEVVPAYCRCSLRRQPPPATGSSAPRRPFPDRPREGQHRRAHFGLHLAGRQHKRRRSASSAPRHTVANGSDARLRRQGAGSSHGGAGSEASHCAIAVAVARPSHAASSSSCRAVASSPEERPRHRPHGWPHGTPAARSGGGEGWKRKGGGGEG</aaseq>

Gene Sequence

<dnaseqindica>1..411#1502..2071#ATGGGGATGACGAGAAGGAGGACGACGCCGCACCGCTGTGCTATCCCCGTGCTGACAACCTCCACGCCGCTCGTCCTCAAAGACGCCGACCTTCTCCCCATCGACAGCGGCGGCTACCCCAAATCCTCCCTATCAAGGACGGCGCCACACCGTTGTGCTGTCCCCATGCTAGCAATCTCCACGCCGTTCGTCCTTGACGACGCCGACCTCCTCCCCACGACAGCGGTGGTCACCCCAAATCCTCTGGCGCGATGTTGCAGACGTCGTCTCGCGTCTTCGCCGCGCACCCTGGGCCGTTCTAGTGCATCCGCCCGTGGTGACGACGCTCCTCCTTTTCCTCTCCCTCGTCGTCCTCCACTCCCACCTCTACTTGTCTGTGAGGCTGTGCCATCGGTGGTCGACGGCGGGGCGGTACCGGTGTCGATGGGGGACCATGGACGTGGGGGGGGGGGGAGAGAGAGAGAGATGAAGGGGGAAGGAGAGACTAACGAGTGGGTCTCACACCGTTCTTCAATATAGGTTGTCAAGTTGGCATGCCACGTGGACAAAAGTAACAAATAGTTAAGAGACCACCTCTTAAGAAGGGAAAAAAATAACTGCAAACCTAAAAATGGTATTTGGATAATTGCCAAACCTAAAAGTGGCAAACAGTTAAATTTCCCCACCAGGTGTCACCGCCACGTGCTCGAGAAGGACTGTATTTACGCTGGTTTCAATAGCTGTTTTACAGCTAAGTTTTTTTTTTTTTTGACTAAATCACCGGGGGGGGGGTGAGAATCCCCACCTGAAGGGCAAGCTTTACCTACGCAAGCGCAAGGGCCCTGGAGGATAGGAGAACAGAATACACGGAGAATACAACGAGGAGAGAACAGAGAAAGAAAACCTCCTAAAATATTACAATTGATGAATGACACCTACAAAATCATCTTGCCAAAATCCAAAACCTACTGCTAAACCCCAACAAATCAACATCCAATTCCTCACACAGCCACAAGCATGTCGGAAGAAAAGAGAGGCCAAGGGAATGTTGTTGAAGTCCAAGGCCACCCGCATGAAGCCATCAAGAAGCTGACTTGATCTTGTTGCTGTTTGTATCAGAGCTCGCCAATGCCCTTTTGGGGAAGTAAGCCCCAAAGGAGGGTGGGCCACTAAAGGTTGCGGCTCGAGGCCACTCGCATTAAGTCTTCTTCAATCAGGCTTTATCAAGTTGCTTGTTAGATCAACTCTCTCCAACGCCCTTCAAGGGAAGGAAGCCTCAAAGGAGGGAGAAACACTGATCCTTGCGGTCCTGGACATCTGGAGGAAGAGGGTGAAGACGAGCAGGGGCTAATAGAAGGGAAATGCCAAGGGGATTCTCACAGAGGAAGAACATCAACGACAACTTTGGAGGAGGGCATAGAACCACTGTAATCCAAGCGGCTACAGGAGCACAATTTCCAAACAAGCACGCCAGATTGAGAAGAAGTTGAAGGGCAAGATCACCAGCGATGTTTGGAACTAGGGGGGAGAGGGCACACAAACGAGGATACTAGGGGGAGGGGAAGGAGAAGAGGTTGCTATCCGCGCCGCGCGCACCGACGAGTGGGGGGTGGGGGGGAGGTGTGGCGCCGACGAGGTCGTGCCTGCCTACTGCCGCTGCAGCCTGCGCCGCCAGCCGCCACCGGCCACCGGGTCCAGCGCTCCCCGCCGCCCCTTTCCAGACAGGCCGCGGGAGGGCCAGCACCGTCGCGCCCACTTCGGCCTCCACCTTGCTGGCCGCCAGCACAAGCGCCGCCGCTCCGCCTCCTCCGCGCCCCGTCACACCGTCGCGAACGGCAGTGACGCTCGTCTCCGGCGGCAGGGCGCCGGATCCAGCCACGGGGGTGCCGGATCCGAAGCTTCGCACTGCGCCATCGCCGTCGCCGTTGCCCGCCCATCGCACGCCGCGTCGTCGTCCTCGTGCAGAGCCGTCGCGTCATCGCCGGAGGAAAGGCCTCGCCACCGCCCTCACGGTTGGCCGCACGGAACTCCGGCGGCGCGCTCCGGCGGCGGCGAGGGGTGGAAGAGAAAGGGAGGGGGTGGCGAGGGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002782