BGIOSGA002189

From RiceWiki
Revision as of 18:15, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA002189

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA002189, complete gene.

LocusTag

B1046G12.33-1

Ensembl Transcript ID

BGIOSGA002189-TA

Ensembl Protein ID

BGIOSGA002189-PA

Length

4272

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:5784667..5788938

Sequence Coding Region

5788526..5788938,5786893..5786931),complement(5786702..5786772,5786068..5786132),complement(5785897..5785986
,5785569..5785661),complement(5784667..5785083

Genome Context

<gbrowseImage1> name=IndicaChromosome01:5784667..5788938 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:5784667..5788938 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGCGGAGGAGGAGGAGGGGAGGAGATGATGATGACGTCGGGGGCGACGGGGCGGATCGTGCCGGTGTTCCGCTCCGTGCTGTCGCGGCGGGCGCTGCTCCGCCTCGCCGTCGCGCTGCACTCGCTGCTCCTGTGGGTGTTCCTCCTCGTCGGCGGCGGCGGCTGGCGGCGGAGTGCGGGGCGACGCGGGGGAGGGGGCGGAGGCGGGAGGGCGGTGAGGACGCGGAGGAGGGCGGCGGAGGAGGAGGACGTGCGGCGGAGGAGGGAGCTCGCGGAGGAGGTGGCCATGGTGGAGGACGCGGACGGGGAGGGGGCGAGCCGGTGGGAGACGTTCGTCGTCCCCGGGGCGAGGAGGAACGCGCTCTTCTGCCGCGTCTGGGAGCCCGCCGCCGCCGCCGCCGAGATGAGGGGTATTTTGGTCATCATACATGGGCTTAATGAGCACAGTGGAAGGTATTTGCACTTTGCGGAGCTGCTCACATCATGTGGCTTTGGAGTATATGCAATGGACTGGATAGGCCATGGTGGAAGCGATGGTCTACATGGTTATGTGCCTTCACTAGATTATGTTGTAGAAGATATAGATGTACTTCTTGGTAAAATTGTGCTTGAGAATCCAGGGGTCCCCTGTTTTCTTCTTGGTCACTCCACTGGTGGAGCTGTTGTTTTGAAGGCATCATTGTTCCCTCATATCAGAGCAAAACTGGAAGGCATCATCCTAACTTCACCAGCTCTGCGTGTAAAACCTGCTCATCCCATTGTAGGGGCTGTGGCGCCAATATTCTCTCTGTTAGCACCAAAGTTTCAGTTCAAGGGAGCTAACAAGAGAGGCATCCCGGTGTCCCGCGACCCGGCTGCCCTGCTAGCGAAGTACTCCGATCCGCTGGTTTACACCGGGCCGATCAGAGTTCGGACCGGCCATGAAATCCTACGCATCTCCTCCTACCTGCTGCACAACTTGAAGAAGGTCACCGTCCCATTCATGGTCCTCCATGGAACCGCAGACCGGGTGACCGACCCCCTGGCTTCACAGGACCTCTACAACGAGGCCTCATCGAGGCACAAGGATCTGAGGCTGTACGATGGGTTCTTGCACGATCTGCTCTTTGAGCCTGAGCGTGATGAGATCGCCACAGACATCATCGACTGGATGGAGCGAATGCTAGCTCTGCAAACCGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MEGGGGGGEEMMMTSGATGRIVPVFRSVLSRRALLRLAVALHSLLLWVFLLVGGGGWRRSAGRRGGGGGGGRAVRTRRRAAEEEDVRRRRELAEEVAMVEDADGEGASRWETFVVPGARRNALFCRVWEPAAAAAEMRGILVIIHGLNEHSGRYLHFAELLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDIDVLLGKIVLENPGVPCFLLGHSTGGAVVLKASLFPHIRAKLEGIILTSPALRVKPAHPIVGAVAPIFSLLAPKFQFKGANKRGIPVSRDPAALLAKYSDPLVYTGPIRVRTGHEILRISSYLLHNLKKVTVPFMVLHGTADRVTDPLASQDLYNEASSRHKDLRLYDGFLHDLLFEPERDEIATDIIDWMERMLALQTV</aaseq>

Gene Sequence

<dnaseqindica>1..413#2008..2046#2167..2237#2807..2871#2953..3042#3278..3370#3856..4272#ATGGAGGGCGGAGGAGGAGGAGGGGAGGAGATGATGATGACGTCGGGGGCGACGGGGCGGATCGTGCCGGTGTTCCGCTCCGTGCTGTCGCGGCGGGCGCTGCTCCGCCTCGCCGTCGCGCTGCACTCGCTGCTCCTGTGGGTGTTCCTCCTCGTCGGCGGCGGCGGCTGGCGGCGGAGTGCGGGGCGACGCGGGGGAGGGGGCGGAGGCGGGAGGGCGGTGAGGACGCGGAGGAGGGCGGCGGAGGAGGAGGACGTGCGGCGGAGGAGGGAGCTCGCGGAGGAGGTGGCCATGGTGGAGGACGCGGACGGGGAGGGGGCGAGCCGGTGGGAGACGTTCGTCGTCCCCGGGGCGAGGAGGAACGCGCTCTTCTGCCGCGTCTGGGAGCCCGCCGCCGCCGCCGCCGAGATGAGGTGAGCACGGAGGGTTCGGCGATCAATTTTTCCTTCGGTATAGTGGTTTGGATTGTTGTGGTGGGGATCAGTGGCTTGTTTCTTTTGTTGGCTTATGGCGATTTCGTTTTCTTGTTGGACACATCGATTCAATTTTTTTAAAATCGATCTTCTCCCATTGGTGGATTGGTGGGGGAAGGGCGTTTTGTGGCTCTGCTTTTACGCAAGAGGACTACCTTTTTATTCTCGTCTGATTCCTGTGAATATTTTTACTGTATTATTATTCGTCATTTCGTTCTGAATTTTAGGGGATTTTTGTTTCTTGGTGGAGAGAGATCCCAGGTTTCGGAATTGGGGTGGCGTTTTGTTCTCCTCGAGTTGGGGAATTGGAAGAGGCTTCTTTTGTCTCTTCTCCAAGCGTTTTCTTTTGGTTGGTTGTAGCTGGTGGCAGTTTCGGTCAAATTTCCAGATTGTTTTCGCTGAAATTTCCGGTGATCTAGCTGTGAAATGACGGTTAATTTCAGTTCCGATTAGACATTCGTGAAGATGAGCTGCATCTGGATCATAATAATTTAGTGGTTTGATTTATCACGGTAGGATTTGTGGCGTAAATCGCATTGCTGAAACTCTGTTGCTGCATCTGCGAGTCTCTCTGAGAGAGACGTGCCGTCTAATGCACGTCTCCTACACACATCCGGCCTCAGATACCGGGCAACGTTCTTGCATTCATTGCACCGGCTAGGCTGCAATTGAAGTAGTTCGCCGCTGCATAATCTTGTCTTCATCCGTGGTTCTGCAATTGTTAGGTAGGAGTAGTTCGATATAATGGTCAAATGGACTTCTTGCCAATTGTCATACTCTCTTACAAACCAGTTGGCTAAGTTTACGACAGCTTCTGATGCAGAGTATTTTTCTCTCTGATGGTATGAAATGTTTAGTGCTGGTAACTTACTAGTACTAATGGATAAGAAGAGATTATAGAAGCTTTATTCGTGTACCTTTAGGCTTTAGTTTAGGAGACCAATTTAAGCACAATCGGGTAGATTAGCAGAATCAAAGCGATTCCTTATCTCACAACCTTTGCTCCATTGCTATATCTTTGTTATCGTTGAAAACGTCTGAATGTGATGGCTTAAACTAAAGTGACCCTGAATAGCTTAGCTATCAAGAAAAGGAGGAAGCTTTTTTTTATTCCTTTGCCCCAATGTTGTATAACCAAACTGTGGATTATTCTTATTCCCATGACCTGCTGGTTTAGCTCTGTTCAGCTGTTCACATTTTAAATGATACTGTAGTCAAACGCTGCATTGAACAAAGATTGAAATAGGAACCAACCACCTTTGTTTAATACTTCAACGTGTAGCTGATCAGCTACCCTTGACGCTGCTGGCAAATTTGACAACCCTACAGCTGAAACCTTTTGAAGAGTATTGTTCTGTTGAAGCCTCTTTTGCAGCAAAGTGGAATTCTTCATTAGCCTGAACCATCTATTTACGAGGGTAGCATGTGTTTCAATGCTAATATTAAGAACAGTTTATTTTTACTTTGCAGTGACACTGTTGTACAATTGCTTCCACTTTCAATTTATACTGATCATTTCCTCTCTTTACTTTAGGGGTATTTTGGTCATCATACATGGGCTTAATGAGCACAGGTAAGGCTATATATCCTCTTAAGTCCCCCACCCACCACACACCTTAATATACATTATACATGTTCTTTCCTCTTTGTTGTCAAAAGTATAATTAAATACTTTTTGATCCCGTATTTCCAGTGGAAGGTATTTGCACTTTGCGGAGCTGCTCACATCATGTGGCTTTGGAGTATATGCAATGGACTGGATAGGTGAGAACTAGTTTGGTTTCTTGGACATGCATTATTGCCTCTTTCACTCTTTGGATGGCTAGTTTTAGTCCTACATTTAGGTAAGTTACAGTGGTTTGGGTCAGAATGCACATGAAATTAGTTTTTGGGGTTGTTTAAGTACCCATTTTGTCGGACCTAATATAACTAACTGAGTTTTTGTGTGAGCCAAAAAGTCATTGGAAAATATGGGGATTGTCTATTAGAAGGAGTATGACTAATTAGAAATTTAGAACCAGCTAAATATTTCATTTGATATTGAAAGTGAAGTAGTCTTATTGATAACAGAGTATTACCGTTTGTTATGGACAAAAGCATGAAATTTTATTCAGAATCAACTTCTAGCTCATGATTCTAATGTTACCACACTCTGTTCACTCACAGCACAAATTGACCCTGCAATGCACACTTACTAACCAAACACAGTAGGCAATTTCATTGATTTTATCCATGCAGTTTGCATTGCTTTTTGTATCAACAACATCTGTTTGTTTCTACTTTTATTTTGAACATTAACAGGCTAACTCTAACATCTCCATATACAATGTCAGGCCATGGTGGAAGCGATGGTCTACATGGTTATGTGCCTTCACTAGATTATGTTGTAGAAGATATAGTAAGTCTGAAAATAGCAAGTCTGTCTTGCAATTATTCCTTCATTCTGTTACTTATGAAATATTTTATTATCTTCAAACAGGATGTACTTCTTGGTAAAATTGTGCTTGAGAATCCAGGGGTCCCCTGTTTTCTTCTTGGTCACTCCACTGGTGGAGCTGTTGTTTTGAAGGTATGCCTTGTAACAATAAGTAGTTTTTCTCAGCTCTATTTAGGCCAGGTTTAGAAACTGACCCTACTCCTCTGGGCCTGTGAATAATGGATATCCTGACGGGCAGAGCAATGGTGCAAAGCATTAACAAAATAGCCTGGTTGAAAACTTGAAATGGTTTGGCTGCAGATATGTTCATTTTACATGCTTCATGTTCTTCTTTCCCTTGTGCTTATCAATAGCTGGTATTTTCCAGGCATCATTGTTCCCTCATATCAGAGCAAAACTGGAAGGCATCATCCTAACTTCACCAGCTCTGCGTGTAAAACCTGCTCATCCCATTGTAGGGGTAATGCTGCTTTTTCTGATACCCTGTTTATTTCTAAACTGTGTTAGTTTTGATGGAATAAGCATCCTCTAGGTCAGCAAAAGTAGATTCATCTGCATAACTTGCTAAAAGAAGATCATGAATACCTTTGAAGAACTAGGTATATTTCAATTAATTAAAACAGCTTGCAAAATTGGTTTAAGCAACTTATCATTTGCCATCTTATCAAACCTTCTGCGAGAAACTGTGGCAGTTGTATTCTATTCAACGTTAGAAAAACAGATATACTATGACCTGTATGCGCTTATTAAAATGATTGCATTATATATTTAGAATTTTCCAATCTGCACAAACTATGCCCGGCAGAAAAACAATCTGTACAAAATTAATGCTTACGAGAACTACATTTAATCTCGTCCTTGATGTGCAAATCTTAAAAAATTGGACCATCTTGGTTTTTTTTTCGACATTCTGATAAGTGCATACCAACTATCTGAATCTTGCAGGCTGTGGCGCCAATATTCTCTCTGTTAGCACCAAAGTTTCAGTTCAAGGGAGCTAACAAGAGAGGCATCCCGGTGTCCCGCGACCCGGCTGCCCTGCTAGCGAAGTACTCCGATCCGCTGGTTTACACCGGGCCGATCAGAGTTCGGACCGGCCATGAAATCCTACGCATCTCCTCCTACCTGCTGCACAACTTGAAGAAGGTCACCGTCCCATTCATGGTCCTCCATGGAACCGCAGACCGGGTGACCGACCCCCTGGCTTCACAGGACCTCTACAACGAGGCCTCATCGAGGCACAAGGATCTGAGGCTGTACGATGGGTTCTTGCACGATCTGCTCTTTGAGCCTGAGCGTGATGAGATCGCCACAGACATCATCGACTGGATGGAGCGAATGCTAGCTCTGCAAACCGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA002189