BGIOSGA003397

From RiceWiki
Revision as of 18:23, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA003397

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA003397, complete gene.

LocusTag

B1135C02.31

Ensembl Transcript ID

BGIOSGA003397-TA

Ensembl Protein ID

BGIOSGA003397-PA

Length

609

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13787177..13787785

Sequence Coding Region

13787177..13787263,13787366..13787785

Genome Context

<gbrowseImage1> name=IndicaChromosome01:13787177..13787785 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:13787177..13787785 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCGTCCTCTCCGGCGCCCACACCGTCGGCCGCTCCTTCTGCTCCTCCTTCCTCGACCGCATCTGGAACAACACCACCGCCATCGTGGACACGGGGCTGAGCCCGGGGTACGCGGCGCTTCTGAGGGCGCTGTGCCCGTCGAACGCGAACGCGTCGACGCCGATCACGACGGCGATCGACGTGAGCACGCCGGCGACGCTGGACAACAACTACTACAAGCTGCTGCCGCTCGACCTGGGGCTCTTCTTCTCCGACAACCAGCTGCGGGTGAACGCGACGATGAACGCGCTGGTGACACGGTTCGCGGCGAACGAAACGGAGTGGAAGCAGCGTTTCGCCGACGCCATGGTGAAGATGGGCAACATAGAGGTGCTGACTGGGGGAGCCGGCCAGATCAGGCTCAACTGCAACGTCGTCAACCCTTCGTCGTCGTCCTCGTCGCCGGTGGTCCAGCTGGCCGGCGAGGAGGAGGCCGCCGCCGCCGGCGCCGTCGCGGCGAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MVVLSGAHTVGRSFCSSFLDRIWNNTTAIVDTGLSPGYAALLRALCPSNANASTPITTAIDVSTPATLDNNYYKLLPLDLGLFFSDNQLRVNATMNALVTRFAANETEWKQRFADAMVKMGNIEVLTGGAGQIRLNCNVVNPSSSSSSPVVQLAGEEEAAAAGAVAAS</aaseq>

Gene Sequence

<dnaseqindica>1..87#190..609#ATGGTCGTCCTCTCCGGCGCCCACACCGTCGGCCGCTCCTTCTGCTCCTCCTTCCTCGACCGCATCTGGAACAACACCACCGCCATCGTACGTACATAGCTCGCCGGCGACGGCGAACTCTATCGATCGCCATTTGACCATTTCGCCATTGACGGCTCACATGGCGGCGGCCGGTGTGTTCGTGTGCAGGTGGACACGGGGCTGAGCCCGGGGTACGCGGCGCTTCTGAGGGCGCTGTGCCCGTCGAACGCGAACGCGTCGACGCCGATCACGACGGCGATCGACGTGAGCACGCCGGCGACGCTGGACAACAACTACTACAAGCTGCTGCCGCTCGACCTGGGGCTCTTCTTCTCCGACAACCAGCTGCGGGTGAACGCGACGATGAACGCGCTGGTGACACGGTTCGCGGCGAACGAAACGGAGTGGAAGCAGCGTTTCGCCGACGCCATGGTGAAGATGGGCAACATAGAGGTGCTGACTGGGGGAGCCGGCCAGATCAGGCTCAACTGCAACGTCGTCAACCCTTCGTCGTCGTCCTCGTCGCCGGTGGTCCAGCTGGCCGGCGAGGAGGAGGCCGCCGCCGCCGGCGCCGTCGCGGCGAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003397