BGIOSGA003601

From RiceWiki
Revision as of 18:24, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA003601

Description

cDNA clone:J033087I02, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA003601, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA003601-TA

Ensembl Protein ID

BGIOSGA003601-PA

Length

591

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:19163886..19164476

Sequence Coding Region

19163886..19164110,19164222..19164476

Genome Context

<gbrowseImage1> name=IndicaChromosome01:19163886..19164476 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:19163886..19164476 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCCGCCGGAGCCGGAGCGGGTGGGAAGCTGAAGAAGGGAGCCGCCGGGAGGAAGGCCGGTGGGCCGAGGAAGAAGGCGGTGTCGCGCTCCGTCAAGGCCGGGCTCCAGTTCCCCGTCGGCCGTATCGGCCGCTACCTCAAGAAGGGCCGCTACGCGCAGCGCATCGGCACCGGCGCCCCCGTCTACCTCGCCGCCGTCCTCGAGTACCTCGCCGCCGAGGTGCTGGAGCTCGCCGGGAACGCGGCCAGGGACAACAAGAAGAACAGGATCATCCCGCGCCACGTGCTGCTGGCGATCAGGAACGACGAGGAGCTCGGCAAGCTGCTGGCCGGCGTGACCATCGCGCACGGAGGCGTGCTGCCCAACATCAACCCGGTGCTGCTGCCCAAGAAGACGGCGGAGAAGGCCGCCGCCGCCGGCAAGGAGGCCAAGTCGCCCAAGAAGGCGGCCGGCAAGTCCCCCAAGAAGGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MDAAGAGAGGKLKKGAAGRKAGGPRKKAVSRSVKAGLQFPVGRIGRYLKKGRYAQRIGTGAPVYLAAVLEYLAAEVLELAGNAARDNKKNRIIPRHVLLAIRNDEELGKLLAGVTIAHGGVLPNINPVLLPKKTAEKAAAAGKEAKSPKKAAGKSPKKA</aaseq>

Gene Sequence

<dnaseqindica>1..225#337..591#ATGGACGCCGCCGGAGCCGGAGCGGGTGGGAAGCTGAAGAAGGGAGCCGCCGGGAGGAAGGCCGGTGGGCCGAGGAAGAAGGCGGTGTCGCGCTCCGTCAAGGCCGGGCTCCAGTTCCCCGTCGGCCGTATCGGCCGCTACCTCAAGAAGGGCCGCTACGCGCAGCGCATCGGCACCGGCGCCCCCGTCTACCTCGCCGCCGTCCTCGAGTACCTCGCCGCCGAGGTAATAACGCTCGCCCACGCCCACGCCCCCACTTTGTCGTCAACTTCATCTGCAGTGCAGGTTTCGATCTGTGTGCTGATCTGGTGGTGCCCTCTCTGTTCGATTGCTTAGGTGCTGGAGCTCGCCGGGAACGCGGCCAGGGACAACAAGAAGAACAGGATCATCCCGCGCCACGTGCTGCTGGCGATCAGGAACGACGAGGAGCTCGGCAAGCTGCTGGCCGGCGTGACCATCGCGCACGGAGGCGTGCTGCCCAACATCAACCCGGTGCTGCTGCCCAAGAAGACGGCGGAGAAGGCCGCCGCCGCCGGCAAGGAGGCCAAGTCGCCCAAGAAGGCGGCCGGCAAGTCCCCCAAGAAGGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA003601