BGIOSGA001513

From RiceWiki
Revision as of 18:11, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA001513

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA001513, complete gene.

LocusTag

OsI_02213

Ensembl Transcript ID

BGIOSGA001513-TA

Ensembl Protein ID

BGIOSGA001513-PA

Length

2014

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:20806254..20808267

Sequence Coding Region

20808219..20808267,20808032..20808127,20807836..20807940,20807562..20807744,20807147..20807302
,20806480..20806622,20806254..20806322

Genome Context

<gbrowseImage1> name=IndicaChromosome01:20806254..20808267 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:20806254..20808267 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAACAATATTGGAGGCTCCACACCAACATCGTTAAGAAGATCATGCCCTTTTGCTGATATTAATAATGCAAGTGCTGGGGATTCACCAAAAAAACGTAACAATATTGGGGTCTTCACACCAACATCGTTAACAAAATCAACCCCATTTGCCGATATTACTAATGCGAGCGCGGGGGAATCACGTATAAACAATGGCAGTGACAGATGCACATCCTCCAATGTGCCGCAAAAAGAAAATATGCAAAATCTGCAAGAAGATGGTGCTAAACTCAGCGCATTAGAATTAAGAAGGAAGCGTGCTAGAGAGAGGTATGCATCAATGAGCCCAAAGAAAAAGGAGGCGAGGAAAATGAAGGCCCGTGTGTACAAGCAATTGAAGGAAGACGAATACTCAGGTTTAAATCAAACAGCTAATAATTATGTCAAAGGAAGTGATCAACAACACATGATCACACCTCGGCGTCTACCATTTACAGTGATCAACAATGTAGCTCATTATGATAATATGGATCATACTGGATCCCCTTTCAGCTGCATACTTCAAGGAGCAACACAAAACAGCCATACACTACCTGCAAATACAGCAGTAAACATTACTTTCTTGGTCTGCCTCTTCTCCTGTATATGCCTACATCCACTCCTTCCCCGAGTAGTCCAGGATGAAGCAGCCAGGTCCAGGATGAAGCAATTCACTGTTATGAACAAATTCAAGACGAAGGCCTTACTTTCCAGTTTCCAGTGGGGTACTGAATTACCACTTGAGTGGAGATCATCTGAACTGAAAGCCAACATTTGA</cdnaseq>

Protein Sequence

<aaseq>MDNNIGGSTPTSLRRSCPFADINNASAGDSPKKRNNIGVFTPTSLTKSTPFADITNASAGESRINNGSDRCTSSNVPQKENMQNLQEDGAKLSALELRRKRARERYASMSPKKKEARKMKARVYKQLKEDEYSGLNQTANNYVKGSDQQHMITPRRLPFTVINNVAHYDNMDHTGSPFSCILQGATQNSHTLPANTAVNITFLVCLFSCICLHPLLPRVVQDEAARSRMKQFTVMNKFKTKALLSSFQWGTELPLEWRSSELKANI</aaseq>

Gene Sequence

<dnaseqindica>1..49#141..236#328..432#524..706#966..1121#1646..1788#1946..2014#ATGGATAACAATATTGGAGGCTCCACACCAACATCGTTAAGAAGATCATGTGAGTTTTTTTATCGCTCTATTTAAGGGCAAATTATTCAGTGCATTAAAATGTGTTTTGCATGCTGATTTCGCATGATTTCCTCCCTCAGGCCCTTTTGCTGATATTAATAATGCAAGTGCTGGGGATTCACCAAAAAAACGTAACAATATTGGGGTCTTCACACCAACATCGTTAACAAAATCAAGTGAGTTTTTTTATCGGTTTACATATGTGACTAATATTCAGTCCATTCAGATGTGACTTGCATACTGATTTCGCAATATTTCCTCCCTCAGCCCCATTTGCCGATATTACTAATGCGAGCGCGGGGGAATCACGTATAAACAATGGCAGTGACAGATGCACATCCTCCAATGTGCCGCAAAAAGAAAATATGCAAAGTATGAATCCGAAATGTAAAACATGCAAGTTATGATTTTCCATTTTCTACCTACTAGAGTTAACATTAACATAATTTGCATGTGTGCACAGATCTGCAAGAAGATGGTGCTAAACTCAGCGCATTAGAATTAAGAAGGAAGCGTGCTAGAGAGAGGTATGCATCAATGAGCCCAAAGAAAAAGGAGGCGAGGAAAATGAAGGCCCGTGTGTACAAGCAATTGAAGGAAGACGAATACTCAGGTTTAAATCAAACAGCTAATAATTATGTCAAAGGTTCCTACATAATCACAATTATATGCCAAACCAGTTTTTAATATTGTTGCATGTGGGCAGCTCCACCTGGTGATATCACAAATGTTAGCATTGATGATTTAAGAAGATGCCACGTAAATGATTGTTCTACACTGTAGCAAGGATCAAACCATGCATTATTACAGTCCGTTGATAGGACTGGACCTCATTCTTACATTTACCTTGCATAAACAATATGGCGATACAGTTGTTTTTAAAGTAATGTTCTACGTTCCAACAGGAAGTGATCAACAACACATGATCACACCTCGGCGTCTACCATTTACAGTGATCAACAATGTAGCTCATTATGATAATATGGATCATACTGGATCCCCTTTCAGCTGCATACTTCAAGGAGCAACACAAAACAGCCATACACTACCTGCAAATACAGGTAAATTTGTAGTTTTTGCCTGAATGAAATTTTGTGTTCATAATAATGGTTATTATTACCAATCGAACAGTAGCCAATATGCTTGATTAAAAACGTATGAGATTCAGATCATAACTAATGTTCCAAATATTTTTTAAGAAAAAAATTGATGTATTGTAAAACAACGCAAAAACAAAAAAAAAATAAATAAATATGTTGAATACACATGGTGACCCATTGAAATAGTACTTACGTGGGACAACTTTTTGAAGAATGTACTGAATCTCATGCATTTAGCCAAGACAAGAAACAAAAGAAACAGTCTAAGCGTACTGGCGTGAAGGACAATGAGAAGAAAGGAAATGAATTGTCTAAATAGGCTGCAACATACACAAAAAATATTGTGTATAGAGAGGTCCTCACAGATTAGAAAAGGTATATTATGCGACTAATTAACCATGCACAATATGCTTGCTTAAATTCCATTCTTTCCGTAATTTTTATATTCCAAGTCTAACATTCCGTGTGTTATTTTTCTTGTACAGCAGTAAACATTACTTTCTTGGTCTGCCTCTTCTCCTGTATATGCCTACATCCACTCCTTCCCCGAGTAGTCCAGGATGAAGCAGCCAGGTCCAGGATGAAGCAATTCACTGTTATGAACAAATTCAAGACGAAGGCCTTACTTGTAAGCTGACAGTTATTTCTTCTTCTTTTTTAAAACAAGCGTAGTTGGTTTGTACATGTTTTGCAGCTTACTACTGATGTTAGCAGATTTCTGAGGTTCTGCTTTAGTTCAGATTTCCAATTGCAGTTTAGCATTTCTTGTAATCATGTTGTGGCAGTCCAGTTTCCAGTGGGGTACTGAATTACCACTTGAGTGGAGATCATCTGAACTGAAAGCCAACATTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA001513