BGIOSGA005290

From RiceWiki
Revision as of 18:34, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA005290

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA005290, complete gene.

LocusTag

P0020E09.24

Ensembl Transcript ID

BGIOSGA005290-TA

Ensembl Protein ID

BGIOSGA005290-PA

Length

828

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:47261581..47262408

Sequence Coding Region

47261581..47262408

Genome Context

<gbrowseImage1> name=IndicaChromosome01:47261581..47262408 source=RiceIndica01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome01:47261581..47262408 source=RiceIndica01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGATGAACGACAAGGAGGAGGAGACTACTCTGAGGATGGCGCGGCAGGAGCTGGAGGATCTCTACCTGGGTCTGGGTGTTCCCGACGAATCGGTGGACCTCACATTCAAGGACCTCCCGTCCGCGTCCGCCGCCGGCGAGAAGCAGAATGATCTGTTGGCCGTCAGGTCCTCCACCAACATCTTCGCCTACAAATTGCAGCAGGACGAGGAGGAGCATCGCCCAAGCGCCGAAGCGCCGGCCGGCCTTCGGCTGTCTCCCACCACTACCAGCAGCACTGTTGTCGCCGACCGCCGTGTTGGTGCCAACTACAACTACAAGCGGCGTCGTCCGGGCATACCTCACTCCAACATCTGCGCGCTCTGCAACAGCTACATCTACCTCTTCCGCCATCGCTGCTTGGTGTGCGGCCGCGTGTACTGTCGGCGGTGCGTCGGCGCTGGCATGGGCGACATGACAGAGGGCCGCAAATGCATCGATTGCTTGGGAAGAAGGTACAGCCACCGCTACATCCACCGGGCCGGCACCAACCTCACGCCCTCCGCCGCCTGTTGCACCTGCGCCTTCTGGGGCTACTACCCCGACGCGCAGGCTGTCAAGCTGCAGGAGCTCGTCTGGGCCGAGAAGGGCCCTGCACCACGCCGCCGACCGCGCCAATCCTCCTCCGCCTCCATCTCTACCTCCACCTCCACCTCCTACACTGGCACCTCATCTGCTTCCATAAACATGACACCAGATCAGCTTAACAATGGCTTCCACTCGACTAGACGTACTCGCGTCAGCTTCCACCACACCCACATCCTCCTCCTTCCTTGTCTCCTCTTCTAA</cdnaseq>

Protein Sequence

<aaseq>MMNDKEEETTLRMARQELEDLYLGLGVPDESVDLTFKDLPSASAAGEKQNDLLAVRSSTNIFAYKLQQDEEEHRPSAEAPAGLRLSPTTTSSTVVADRRVGANYNYKRRRPGIPHSNICALCNSYIYLFRHRCLVCGRVYCRRCVGAGMGDMTEGRKCIDCLGRRYSHRYIHRAGTNLTPSAACCTCAFWGYYPDAQAVKLQELVWAEKGPAPRRRPRQSSSASISTSTSTSYTGTSSASINMTPDQLNNGFHSTRRTRVSFHHTHILLLPCLLF</aaseq>

Gene Sequence

<dnaseqindica>1..828#ATGATGAACGACAAGGAGGAGGAGACTACTCTGAGGATGGCGCGGCAGGAGCTGGAGGATCTCTACCTGGGTCTGGGTGTTCCCGACGAATCGGTGGACCTCACATTCAAGGACCTCCCGTCCGCGTCCGCCGCCGGCGAGAAGCAGAATGATCTGTTGGCCGTCAGGTCCTCCACCAACATCTTCGCCTACAAATTGCAGCAGGACGAGGAGGAGCATCGCCCAAGCGCCGAAGCGCCGGCCGGCCTTCGGCTGTCTCCCACCACTACCAGCAGCACTGTTGTCGCCGACCGCCGTGTTGGTGCCAACTACAACTACAAGCGGCGTCGTCCGGGCATACCTCACTCCAACATCTGCGCGCTCTGCAACAGCTACATCTACCTCTTCCGCCATCGCTGCTTGGTGTGCGGCCGCGTGTACTGTCGGCGGTGCGTCGGCGCTGGCATGGGCGACATGACAGAGGGCCGCAAATGCATCGATTGCTTGGGAAGAAGGTACAGCCACCGCTACATCCACCGGGCCGGCACCAACCTCACGCCCTCCGCCGCCTGTTGCACCTGCGCCTTCTGGGGCTACTACCCCGACGCGCAGGCTGTCAAGCTGCAGGAGCTCGTCTGGGCCGAGAAGGGCCCTGCACCACGCCGCCGACCGCGCCAATCCTCCTCCGCCTCCATCTCTACCTCCACCTCCACCTCCTACACTGGCACCTCATCTGCTTCCATAAACATGACACCAGATCAGCTTAACAATGGCTTCCACTCGACTAGACGTACTCGCGTCAGCTTCCACCACACCCACATCCTCCTCCTTCCTTGTCTCCTCTTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA005290