BGIOSGA011278

From RiceWiki
Revision as of 15:38, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA011278

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA011278, complete gene.

LocusTag

OS03G0197400

Ensembl Transcript ID

BGIOSGA011278-TA

Ensembl Protein ID

BGIOSGA011278-PA

Length

4943

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:5581561..5586503

Sequence Coding Region

5586368..5586503,5586123..5586274),complement(5584615..5584718,5584467..5584527),complement(5584300..5584392
,5584110..5584210),complement(5583740..5583848,5582987..5583031),complement(5582833..5582901
,5582659..5582750),complement(5582541..5582583,5582154..5582213),complement(5581936..5581995
,5581561..5581635

Genome Context

<gbrowseImage1> name=IndicaChromosome03:5581561..5586503 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:5581561..5586503 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACAACGCCCTCGCGAGCGCCGCGGCGATCGCCGACCAGCGCCAGAAGATCGAGCAGTACCGCCACATCCTCTCCTCCGTCCTCTCGTCTTCCCCGCCGGACATCTCGCAGGCGAAGCGCTTCCTCGACCACATGGTTTCCGACGAGGTGCCGCTCGTGGTGTCGCGGCAGCTGCTGCAGACGTTCGCCCAGGAGCTTGGGAGGTTGGAGCCAGAGGCTCAGAAGGAGGTCGCGCACTACGCGCTCACGCAGATCCAGCCTCGTGTGGTCTCCTTCGAGGAGCAGGTGGTAGTGATTAGAGAGAAGCTTGCAGAACTGTATGAGTCTGAACAACAATGGTCAAAAGCTGCACAGATGCTTAGTGGGATTGACTTGGACTCAGGGATCAGGATGCTGGATGACACAAACAAATTATCCAAATGTGTCCAGATTGCACGACTTTATTTAGAGGATGATGATTCTGTTAATGCTGAAGCTTTTATTAACAAAGCTTCATTTTTGGTAACAAACAGTCACCAAGAACTTCTGAACTTACAGTACAAGGTATGCTACGCTAGAATTTTGGATCTGAAGAGAAGATTCTTGGAAGCTGCACTTCGATACTATGACATCTCTCAGATTGAACAACGCCAAATTGGTGACGAAGAGATCGATGAAAATGCTTTGGAGCAAGCTCTTAGTGCTGCTGTGACATGCACAATATTGGCTGGTGCTGGTCCGCAACGATCTCGTGTTCTTGCTACATTGTACAAGGATGAGAGATGCTCAAAGTTGAAGATATACCCAATACTGCAGAAGGTCTTTCTTGAAAGGATTTTGAGGAAACCAGAAATTGAAGCATTTGCAGAGGAGCTGAGACCGCATCAAAAAGCTCTGTTACCAGATAAGTCTACTGTGCTTGACCGGGCAATGATTGAGCATAACCTCCTTAGTGCCAGTAAACTTTACACTAATATCAGCTTTGATGAGCTTGGAGCATTATTGGGCATTGACCCTAGGAAGGCTGAAAAGATAGCATCGCGAATGATTTATGAAGATAGGATGCGAGGTTCAATTGATCAGGTTGAAGCTGTGATACATTTTGAGGATGACACTGAAGAGCTGCAGCAGTGGGACCAACAGATTGCGGGACTGTGCCAAGCGCTGAACGACATTCTGGACAGCATGTCAAGCAAGGGAATGGCTATTCCTGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MDNALASAAAIADQRQKIEQYRHILSSVLSSSPPDISQAKRFLDHMVSDEVPLVVSRQLLQTFAQELGRLEPEAQKEVAHYALTQIQPRVVSFEEQVVVIREKLAELYESEQQWSKAAQMLSGIDLDSGIRMLDDTNKLSKCVQIARLYLEDDDSVNAEAFINKASFLVTNSHQELLNLQYKVCYARILDLKRRFLEAALRYYDISQIEQRQIGDEEIDENALEQALSAAVTCTILAGAGPQRSRVLATLYKDERCSKLKIYPILQKVFLERILRKPEIEAFAEELRPHQKALLPDKSTVLDRAMIEHNLLSASKLYTNISFDELGALLGIDPRKAEKIASRMIYEDRMRGSIDQVEAVIHFEDDTEELQQWDQQIAGLCQALNDILDSMSSKGMAIPV</aaseq>

Gene Sequence

<dnaseqindica>1..136#230..381#1786..1889#1977..2037#2112..2204#2294..2394#2656..2764#3473..3517#3603..3671#3754..3845#3921..3963#4291..4350#4509..4568#4869..4943#ATGGACAACGCCCTCGCGAGCGCCGCGGCGATCGCCGACCAGCGCCAGAAGATCGAGCAGTACCGCCACATCCTCTCCTCCGTCCTCTCGTCTTCCCCGCCGGACATCTCGCAGGCGAAGCGCTTCCTCGACCACAGTAACGAGCACTCTATCTTTGCCCCTTTACCTGTTGATTCGTATGGATTTTGTTCTGGTTCGGGTGTGACGGTTGGGTTCGGTGCGGCCGCAGTGGTTTCCGACGAGGTGCCGCTCGTGGTGTCGCGGCAGCTGCTGCAGACGTTCGCCCAGGAGCTTGGGAGGTTGGAGCCAGAGGCTCAGAAGGAGGTCGCGCACTACGCGCTCACGCAGATCCAGCCTCGTGTGGTCTCCTTCGAGGAGCAGGTTGGCACCTTTGTTTATACCCTTGGTTTCAAATCGTCAATGCTAGCCATATAGTAAGTTCTGAATACATATGTTTTACTGTATAGTGGGTAGAATTGGTACAAATTTTCATGGATTTTTTCCCCGGTGATGATTATAGTTTATATGTATGGTAGTGGAGCCGTAACCGTCGCTTTTGTGATATCAATTTGAGTCATGTGGCATAATGTTATTGCAAGGGCTCATGACTCCACACAGTGCATGGAGATGATGCCGCTACCTTACTTCGTTTGGACAAGTTTATCGAGGCGAGTATGGCATGGTTCATTTTTGGAATTCATTGCCTGCCAAACTCTTAGTTTTGGAGGAATGTTTGTACTTGGTAATGATGTCAGCCAATGGTTAAGCTAGAGCATGAGATGGAGTGATGATGGGTTTGGCTAATGCCACACAGCTTGCCAGCCCATTTTATTAATTTATGGAGACTAGTTGTTCCCCTGGTGGTAGTGTACATGAAGAAAAATATTACATGACCAAGCAATGCTATGAAGTGACTGGTGTTAGTTAGGGGTCTGAATAGGAAAGAAACTTGTCTGGAATGCAATGCATGATTCTGCGCATTGCCTGGGATGGTGGGGCCTTGTGTAAATGCTTTGTATTTCTCATCTTCCTAGTGATTTTAACATATAACATATTTATAAAGACACTGTACATGTTAAATTAATGATTGTTCATTAAGCGTTGAGTTTTTACGGATGCAGAAATCGACTATGTAATGCTATGTTTGGAGCGCATCTGATTAGGATGTATCTGTGCTGTGTGTTGGAACAAATCATTTTGTATATGATAACAGTATTTCTTTAGGTTCTTTGTCTTTTGTTCTTTTATAGCTTATAGTGATTGCTATAAGAAAGGATAGTAGTGCAATACAAATAATTGTTGCTTCCACATGATTTGTGCCCGTGTGCATGCTACAGAAATGTAATTACTCTAGGTTGCCTTTTGGTTGATAAGAGTTCTTGCATAAGTTTCAATTTATACTGTCTGAAAGCTTTCATCTTTGTCAACCACAGAACAACTCAATGCAATTGTGGATTTGTTTTATTGAAGTGGTTACTCGTGTTATTTATGCAAGATTCCTAGTTTTAGAAGATTATGAAGAGCGGCCCAATTTGACATAATGATGTAAAAAATTGTTATGAACAATGTAACAATATATACATTCATGTTTGTTGGTGTGATAATGGGTCTTCCGTATTAGTATCTTTATAATTTACCCTATGCCAATTTTGGGCATTTTTTCTTGCAAGCTTAACCAAACTTCCGAACAAACTAACTGTTACTTTTGTTTGACCTTTGTTGGTATTATGCAGAGAAATTCTGCAATATTCTTAATCTTCTATTTGGCTGTTTATGATTTGACAGGTGGTAGTGATTAGAGAGAAGCTTGCAGAACTGTATGAGTCTGAACAACAATGGTCAAAAGCTGCACAGATGCTTAGTGGGATTGACTTGGACTCAGGGATCAGGTAGAAACTGACTTACTTTTCTTTCTGAACATGTGTATGGCTTTTTCTTCAGGACATGAAGCATCTGATTTAAATTTAAATTATCAGGATGCTGGATGACACAAACAAATTATCCAAATGTGTCCAGATTGCACGACTTTATTTAGAGGTTAGCATTGTTTGTTTGCTGTTGGCTTTAATGGTACATATTTCCAGCTTACTAATTTAGTTCTTCATTTATAGGATGATGATTCTGTTAATGCTGAAGCTTTTATTAACAAAGCTTCATTTTTGGTAACAAACAGTCACCAAGAACTTCTGAACTTACAGTACAAGGTTTGTTGATGCTGGCTCAGTTCAATATTTTTGTCTACATTAAAACAGACACTTTTACTTATTTTCTTCTTTTTTTATATATATTTAAGGTATGCTACGCTAGAATTTTGGATCTGAAGAGAAGATTCTTGGAAGCTGCACTTCGATACTATGACATCTCTCAGATTGAACAACGCCAAATTGGTGACGAGTAAGATTTTCTCTACATAGTTGCAGATTTGTTTCCCTTTTCAATTCATGTGTTTCTTATCTCCATTATCTGTAGTTTGCTTGTTCTGTGGTGACTACTCTATTTCTGCACCCTTCTAGCAATACATTATATATTTTCCAATTCCCCTGCCCCCTTGCTATTAACATCTTGGATATTTCCACTTAAATTTTACAGTTGTTACATTAGCAGCTGATACTACTTATAAAAATTCCTGATGGAACACTCTGCATGTGATCTCAGAGAGATCGATGAAAATGCTTTGGAGCAAGCTCTTAGTGCTGCTGTGACATGCACAATATTGGCTGGTGCTGGTCCGCAACGATCTCGTGTTCTTGCTACATTGTACAAGGTATTTGCTTCGTTGGTTTATCATAACATTCTGGTTTGCAGTGCTTGTTATATCTACATGTCATTTTTTGTCTGCAATAACTTTTTATGTATCATACTATCGTAATCATCTTTGCCCTTTCCCTGTGCCATGTTTATCAAATGGACAAATCTGAATTATCAGATGCTCTGCAGAGCTCTGTATCGATATTGATTGGTTTCTGTTATGGAGCACCATAGGTTGTGGCTTTAGCTTACTATGATATACATGCTGTGGCTTCTCTCCCTTACGCAGTGATTTGTATTCCCATTTACTGTACATCATTCTTGGTACACTCCAAAATTTATGTTTTCCGGGGAAAAAAGTATGTATATCGAAACAGAGGAATTGTCTCCGAACTCATTGGAATGTGGCATCATTATACAAAAACTTAACCCATTTGATATTGAATTACTAATATCAAGATCCTTTCAAATAGTTATTTAGGATTTTCTTTTTGTAGTTCTGCTAAACTAATAAATATGCTAGCATCCAGTTTCAGTGGGTAGTTTATAGTTTCATACTGTTTGATGTTGACCAATCTGTAACCATGGTCATCAAATGAACCAACACCTTGTATCAACATTGTAGTAGCATGAAAATACAATTGTTTTGCATCTGATTTTTCTCATTATAGCGGTGCTTAAATTATGACTCGTGGCATGATTTTATACTGTCTTTTCCCTTTAGGATGAGAGATGCTCAAAGTTGAAGATATACCCAATACTGCAGAAGGTGCCTATCTTGATATACTCCCCTGGCATTTATATTTGGAGCATAAGCTCCCTTTATTGACAGGCCTTCTACTTCAAATGTGTAGGTCTTTCTTGAAAGGATTTTGAGGAAACCAGAAATTGAAGCATTTGCAGAGGAGCTGAGACCGCATCAAGTTAGTGAACATACTCTCTTCCAAGATAACTTGTAGTAGTAGCTTGTAATTTTATTGACTGGATTTTTCTTCTGTTCAACAGAAAGCTCTGTTACCAGATAAGTCTACTGTGCTTGACCGGGCAATGATTGAGCATAACCTCCTTAGTGCCAGTAAACTTTACACTAATATCAGGTTAGTTTTTGCATTGAAATTTTCCTGGGTCATTGTGATTTATCATTCTGATCAACTATTGATTTATTTCTGTAGCTTTGATGAGCTTGGAGCATTATTGGGCATTGACCCTAGGAAGGTTAGTATTTTGGTTAATTTTGCCTGTTGATATGATACATCATTTCATGTTTATAAAGACAGATTCACACAAAGTCCATATGACTAAGAAAAAGAAAAGAATTTGGAATATATGGGTTCTGAGTGGTACTTGCTGGAAACTAGTCAAACTGGGAAGAACCACCGAATTTCACAATTTAAAATCAAATAGGATAGTTCAAATCATCTGGCCTGTAACTGGTACCAGGAAGAACTGGCATTTTCTCTGTAAATTCTTTATTTATGTTTGATTTTAAATATGAAAGTATTCAAATTGGAGTCTTACTGCAACTGATTTTGATGCTGGCAGGCTGAAAAGATAGCATCGCGAATGATTTATGAAGATAGGATGCGAGGTTCAATTGATCAGGTTTTATTCATATGACTTCCTTAATCCTTATGTTGATATTCATACTATTCCACCATTTCGAGCAGACATCTGAAATAGACTTACACTGTAACCATGTTTTACCGTTTCTGGTTTAATTCAAGTTGTTATGAGATTAACTCGCCTGGCTTATTTTACAGGTTGAAGCTGTGATACATTTTGAGGATGACACTGAAGAGCTGCAGCAGTGGGACCAACAGGTTAGTTTACCCGCACACTCGTGCTTGGCGTTTCTAGCATTAGCTTAGGCACCAGTTTTTTCTGCACAAGTATATCTCTTTCCCCATTTTCCCAACCCACCTCTTGTTTTACGTGCGCACACTTTTCAAACTGCTAAACGGTGTGATTTATAAAAAACTTTCTATATAAAAGTTGTTTTAAAAAACATATTAATCTTTTTTTTAAAAAAGTTAATACTTAATTAATTATGCAACAATACGAGCGCGCGCCAGGGAGAACACAGCCGCATACATATCGCTAAACCTCGGATGTGGTTTCAGATTGCGGGACTGTGCCAAGCGCTGAACGACATTCTGGACAGCATGTCAAGCAAGGGAATGGCTATTCCTGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA011278