BGIOSGA012742

From RiceWiki
Revision as of 15:46, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA012742

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA012742, complete gene.

LocusTag

OS03G0377300

Ensembl Transcript ID

BGIOSGA012742-TA

Ensembl Protein ID

BGIOSGA012742-PA

Length

6745

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:16691077..16697821

Sequence Coding Region

16691077..16691285,16691657..16691771,16691884..16692087,16692318..16692446,16692533..16692700
,16693376..16693633,16694507..16694607,16695662..16695751,16696588..16696660
,16696747..16696775,16696881..16697004,16697197..16697307,16697538..16697638
,16697719..16697821

Genome Context

<gbrowseImage1> name=IndicaChromosome03:16691077..16697821 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:16691077..16697821 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGATCTCTCCGCCTCCGCCGAGCCCTAGCTCCGGCGACCCGATCGAGGCCGCGAGACACGCCGCCGCGGCCGCCCTGGCAGTGCCCGCACGCCTATGGGGCTCCCTCCTCGCCCGCCTCCCTTCGCTCTCGGACCGCCGCCCCCGCCGCCGCCGACGCCCTGCTCTTCCGCTCCCCTTCCGCACAGCCGCCGCCCATTCCGCCCGGGCTACCGGTGAGACGCCCAAAGCTTTTGGCATCCTAGAAGATATTGTACAACACACGCTGTGTAGTTTGCATGGTATTCAGAAAAGCTTACTCTTTTGGCAGTCCAAAGCTGAGGGAACAAATTCACAGAAAATGTATTTTATGATCTTTGAAAGGGGACCAAGGGCCTTTGTTAAAGCAACATATCAGACATTGACTAGACTAAGGAGCAATGAGAGTCCAACCCAGTACATTTTGCACTCTGCATCTGATATGGTCTCAACAAAACTTGCTGTCCTGACAAACATGCAACACTGCTTGGCTGCTTTTCTTGCTGAGGTTTATTGCGAAGTTGACAAATTCAAAGAAGGATTAACTGAAAATTCAGATAAATCGCTTCACACACTGTTTGCTGTTTTGAATACTGTCTTCTCCAAATTGGAGGTATCACTCCAAAATGTTTGTGAGGGGCATACTCTACTGTTCGCACTCGATGGAAGCCCATCTGAACTTCTCTTTGAAAGATTACCAGAAATTGATTATGATAACTCAGAGTGGACAGAGGCCTCCTCAACAGATGCTATATGTTTGATCTACCAAAACCTCCAGAAGCTAGATAACCTTGTTTGCTCTCAGCTCTCAAGGCATAAAAAACCAAGACATATGACCATATACTGGTTGCCCTACACATGTGGAGCGTTGGGTCTCTCGGCATGTTCTCTGTGGCTTTTGCGACACAGTAGCTTGATGGGAAGTTCTGACATCGACAACTGGGTTCAAAGTGCCAAAGAGTCAATAGCTGGATTTTGGGATGTGCATGTTGAGAAACCTGTAGGATACTTTCTATTTATGTCCTTCTATTATTTATCTTATGCATTTTTAAATGATGCTAGTATCATTTCCATCAGAGGTGAGCTTTTTGAGACATTCAAAAACAGAGGTAAACATGTAATGGATACACAAGAGGTCCAACTGAATGAAGAAGTATTGCGCAGGATGATGCTTGAATTTTGTCAGCAAACTTCAAATGAGAAGCTGCCACAAGATATATCAGATCAAGCACTTATGGAGAATTTCATGGAGAGATATGAGAAGGAATGGACCCATCCTGTTAAGAATCTTTTCGGTGGAGAGTTAGCATATGCCATGCTTATCCAGCTTCAGAAGCGCACAGTGGATATCAAGCAGGCAATGCTGGAACTGGATCAGATTCTTAAAGGAAATGCGATAAACTTCGCTATTCTTGCAGCTTTACCTGCATTTGGTGTTTCGCTTTTGCTCCTCACTGTGGTGCAAGCATGGATTATGAATGACCAAGGCGCCGAGGGAAGAGGCAGGATTGCACGGCGCCAAAGAAGGCTGCTGCTTCTTGATGCAGAGAGAAAACTTATGGAGTTTAAAAATTGCATGATTAATGGAATGGAGGAAGAGGCATGCTGTAAGTTCGGATTAACACTGTACAACCTTGATAGATTATACAGAGCTGTTGAATCACATGCAGAAGAAACAGGCGAGTGGTCAAGATTAAGAGGAGACATTTTGGATCTGGCGAAACCTAAGATGAGTATGACAGACAAGCTGGTGGTTCTTTCACGACTGAAGGGAACGTATGACTGCTTTCCATAG</cdnaseq>

Protein Sequence

<aaseq>MAISPPPPSPSSGDPIEAARHAAAAALAVPARLWGSLLARLPSLSDRRPRRRRRPALPLPFRTAAAHSARATGETPKAFGILEDIVQHTLCSLHGIQKSLLFWQSKAEGTNSQKMYFMIFERGPRAFVKATYQTLTRLRSNESPTQYILHSASDMVSTKLAVLTNMQHCLAAFLAEVYCEVDKFKEGLTENSDKSLHTLFAVLNTVFSKLEVSLQNVCEGHTLLFALDGSPSELLFERLPEIDYDNSEWTEASSTDAICLIYQNLQKLDNLVCSQLSRHKKPRHMTIYWLPYTCGALGLSACSLWLLRHSSLMGSSDIDNWVQSAKESIAGFWDVHVEKPVGYFLFMSFYYLSYAFLNDASIISIRGELFETFKNRGKHVMDTQEVQLNEEVLRRMMLEFCQQTSNEKLPQDISDQALMENFMERYEKEWTHPVKNLFGGELAYAMLIQLQKRTVDIKQAMLELDQILKGNAINFAILAALPAFGVSLLLLTVVQAWIMNDQGAEGRGRIARRQRRLLLLDAERKLMEFKNCMINGMEEEACCKFGLTLYNLDRLYRAVESHAEETGEWSRLRGDILDLAKPKMSMTDKLVVLSRLKGTYDCFP</aaseq>

Gene Sequence

<dnaseqindica>1..209#581..695#808..1011#1242..1370#1457..1624#2300..2557#3431..3531#4586..4675#5512..5584#5671..5699#5805..5928#6121..6231#6462..6562#6643..6745#ATGGCGATCTCTCCGCCTCCGCCGAGCCCTAGCTCCGGCGACCCGATCGAGGCCGCGAGACACGCCGCCGCGGCCGCCCTGGCAGTGCCCGCACGCCTATGGGGCTCCCTCCTCGCCCGCCTCCCTTCGCTCTCGGACCGCCGCCCCCGCCGCCGCCGACGCCCTGCTCTTCCGCTCCCCTTCCGCACAGCCGCCGCCCATTCCGCCCGGTGAGAAACCACTGCTTGGATTTTAGTGTGCCTCCTGTGCTTCTTATGCTTGTGCTGCAAGCTCTCGCTTGCTAGTGTTATGCTAGTGCATTCGTGGACTGGACAGACCGAGTAAATTTGGGCAAATTTTGGGGTTTTAGGTTGGTAGCTGGTGGTATGTGAGGAATTCGTACAATGCGTTTGGAATTAGTGACTAGGTGCAATATAGGCAAAATCTACCGATTACAAATGCGAATATCTGATAGGAATGTTGTGTAAGCGTGTGGCTAATGCCTAATGTTCTGGTATTTTCTTTGCGTCGTCGATGACCGTGATGACTGATGACACATAATTGCATGAAGTTTGTTTTTTAAATCATTTGTTACTTTCAGGGCTACCGGTGAGACGCCCAAAGCTTTTGGCATCCTAGAAGATATTGTACAACACACGCTGTGTAGTTTGCATGGTATTCAGAAAAGCTTACTCTTTTGGCAGTCCAAAGCTGAGGTCTCAAGTTAATTCATAAATCTTTTATTTTTTTTACGCTGCAATTAATTAAAAGAGTGCATCTTATACTTCATGCTATTTACCTATTTTTGGTTCTGTTATATTTATTCAGGGAACAAATTCACAGAAAATGTATTTTATGATCTTTGAAAGGGGACCAAGGGCCTTTGTTAAAGCAACATATCAGACATTGACTAGACTAAGGAGCAATGAGAGTCCAACCCAGTACATTTTGCACTCTGCATCTGATATGGTCTCAACAAAACTTGCTGTCCTGACAAACATGCAACACTGCTTGGCTGCTTTTCTTGCTGAGGTTTGTTTAGTCAGATGTTTATCATTACAAATGCTTATGTCTAGTAGAATAAAACTCGTGTCAGCAGTTCTTTCAAAGCTAACTTTGTAGTTGCTCGCTTCCAAAAATTGCTGTACTACTCTAGTCAGATCATTCAAACCCAATTTTCTAACTCTTTGATAACAGTTGTCTGCTTTACATGACACAGTTCCACATTTATAAATCCAAATCATACCTTGCCTGTTCTATAGGTTTATTGCGAAGTTGACAAATTCAAAGAAGGATTAACTGAAAATTCAGATAAATCGCTTCACACACTGTTTGCTGTTTTGAATACTGTCTTCTCCAAATTGGAGGTATCACTCCAAAATGTTTGTGAGGTATGCATTGTTTGCTTTTCTTGCATTTGGATGTTATATGTATAATATACTTTTGTGTTTGGCATTATGTAATATATTTTCTTCAGGGGCATACTCTACTGTTCGCACTCGATGGAAGCCCATCTGAACTTCTCTTTGAAAGATTACCAGAAATTGATTATGATAACTCAGAGTGGACAGAGGCCTCCTCAACAGATGCTATATGTTTGATCTACCAAAACCTCCAGAAGCTAGATAACCTTGTTTGCTCTCAGGTAAGCAACTTTCTCTTTCAACAACAGCAACTTGTCTCGCATTTGCTACTTCTATTAATGTTACCTGAGTTGTAGATGGGGTATGGTTGGATCAATGTTATACTATTGGAGGTTCTATGATTGGGCCTGTTCGGCTGCCTGTTCTGCAGTTGTGGCACAGCCGGCACCAACAGTGCCACATGCACACGCGCAGCCGCAGCCGCCGCTGCCAGCTTGCTGAACAGGCCCACTACCTGTTTGTGCTTGCTGTATAAAATGTTTATATAGCTATATGCATATGCATTGTTTCAGACTATAAATGAGTGGTATTGTCATACCTATAGTTCTGAACAGGCGCCCCATTAGCATGCATATAATGGAGCAACATGCTGATTATCAAAACCATGAGATTTGAGATGTGAGAATTAATCATGTGGATGAACTAGTGAAAATGTGTTCAATGCCAAACTTGTATCTCAATACAGAGTAAATGTGTAAATGTATAGCATTCTCCAGGTAGTATTTTATTTTTTGTGATTTCTCCATTTATCATATTTTTACTTTTATAAACTATGTAAGTTGCAGTTATGTAGAAATAAGTGGGTTTGTTCACTGTACAACAATAAATCTTACATTTCTTATCAGATGATTATATGTTGCTTAATTGCCTGAAGCAAATATTTTCTGCAATTATAGCTCTCAAGGCATAAAAAACCAAGACATATGACCATATACTGGTTGCCCTACACATGTGGAGCGTTGGGTCTCTCGGCATGTTCTCTGTGGCTTTTGCGACACAGTAGCTTGATGGGAAGTTCTGACATCGACAACTGGGTTCAAAGTGCCAAAGAGTCAATAGCTGGATTTTGGGATGTGCATGTTGAGAAACCTGTAGGATACTTTCTATTTATGTCCTTCTATTATTTATCTTATGCATTTTTAAATGATGCTAGTGTAAGTTAACTGAGGGTGAATCAAGGCATTCTAGTTAAAGTCTTTTCTCGTTATTCCGACATTGACATATATGAGATGTTCTCTGAGGTACAGGAGGATAAGATTTTGTTAATCTATTCATGCAAATATTTGTCTAACAAAAAGGAAAACCAGATAAAGGGAAAGAAAAGCATGCTGCCTTGTGCATACTAGCCGTACTGTTTTCTTATAGTATAAGCATATATGATAGAGTATAGAAACAATTTCATGTGTTTGTTTACTGCAGCACTTGCACTTATTACCATGAACATCCTTAAGTTTACATGTGTATATAAGGCATATAACTAACTACTATCTTTGTTGACAATTATAAGGCACACACGTAGTTTCAAAATTTTGGACATTGTAATTTTTTACCAATAAATAAGTAATGTAAGATGCAACATTATATAGTTGTGTGATACAAAAATGGTAATTTTGAATTTTTGTTTGCAATAACTTATGATCATGATTTTGTAGTTACACACGCTATATTGCAAAAGATTCACAGTCATAAATTCATTTTGGCAGACCACACCAAGTCAAATCGCACACAATATTATATAAAAATCAACAGATAGTAGAGTAATATGCACCAACATCTGCACCGAAATAGTCTAAATACTATTCCTTGTGGAACCATTGAATGCAACATGATATAACTTCAGAGAGCATTAGTGTAGGAGATCAAGTGTCAAGTTTTAGTGGGGAACTTCTAGTTGGATTTAATATAGCTGCAATTTTTTTCCACACCTTTGTTGTGGCTGAATTTTGATATTGTTCTTAAAATTTGGAAATCAATTATGTTATTGTGATTGCATCATGATTGTTTTATTCTCATTTGATGATCATTAGATCATTTCCATCAGAGGTGAGCTTTTTGAGACATTCAAAAACAGAGGTAAACATGTAATGGATACACAAGAGGTCCAACTGAATGAAGAAGTATTGCGCAGGTTATTCCCTGATACTACATCTCTAATATGCAAATTTAATGGTAATCATATCACATAGTTTTTTCTGCCACTCGACAAATTAGTACCATATTGCATATCTAATATTGCATTTTCATCATGTTCATCTGTTTACTCAGATATGAATACTTTAGATGATATTTACCTGTGGTTTCAAGAATTTTAAGTCGAGTATGCCAGTATGGGGGTTTCAATAATGCAGCAGATATGCTTGTAATTTTGATTTGGGATACCCACCACCATATTTTGAAGTGCTTTCCAATTATTTTAGGCATAAATAGTGGGGTAGTCACTATGAGTATTTGTCTTGTGTGACATGAAGTAGATGTGGTGGCACAAGAGCACAGTGGTACCAGCTTAGAATTTCTGTTTCCTTTTTGTTATCTTTTGTTTACTACTGTTAGGATTCTGTCCTCGTCCTCAAGATACCAAGTAAGTAGCTGCTATGCTGAGATAAGATATGTTAGGTCCTTTCTCTGTAGAAAGGGTCAGACAAACTGCACCTGCTTTGAGGAATCAATCAATGGAAAAAAAATCCTAAAATATCTCTCACTCCTTGCTTCCCTCGCCATGCAACAGCTACACTACAGCTAGTCAGTCATGCAGTAGGTGTCTAGGGACATGTCCTGAAAACTTCCCACTACTTCCATTCCCGTTTTAACCCACAGTAAACAATATGAAAGTATTGTACAGGTGTGATGATTGATGAAGCCATTGATGACATAGTAAATACTGTACAAAAGAGTGGTGACGCCTAAACAAAAAGATTCCCCAACCCAGCACCAAGATTTTCTTCGTTTATCTACTTTTTTGTTGATATTATTGGTTTTGACTAATGTTTTTTCATCCTGGAGTGCTGTAACTTTTTCAGTAAAAAATTTGCAATTTCTTTTGTCTTGAACAAAAAATTACAAACTTTAATTTTCTTGAATATGCAAAACTTCAGCTTTGCAGCCATTTTTTTCTGAGTCCATTAGAGGAGCATAAATTATATTTTGCATTTTTTAAGCCCACTGGTTACATATTGGATTTGTAGGATGATGCTTGAATTTTGTCAGCAAACTTCAAATGAGAAGCTGCCACAAGATATATCAGATCAAGCACTTATGGAGAATTTCATGGAGAGGTAAGTCTGTTTGAAAACTATATACTGATGTGGTGTTGACTTGTTTGCATTTATGTGTTACAGTGTTAGGCCAAATGTTGCAAGTTCAAAAGGCACCTGTAATATTTTTTTCTCAAGAATTTTACTGTATTTTCCTTATGCTGAAGAAAGTAATTCTTCATCTTGATCTTTCTCTGCTACCTTTTAAGAGCAAATATTATAGAGGTAATTCCATATGAGGAGCTTTTGATTCAGGGTTGGAACTTGGGATCATTTGATCACAAAGGAAAACATGGCATGTGCTTCATATACTTCATTTGAGTTTCAGTTGCTTTTTTGAAACTAAAGTGATTATATTTGCACGTGGGGTAAACCTTGCACCGTAAGGCTCTTCCAACTTCAGGGTTCATTTGTTTCCTAGTATGTTTGGATGAAAGCAATGAGCCATCTGAATTTCTTGGGAACTCTATTTCATGTCTCAGTAAAATTCTGCAAGGTGGTGATAGAAGTTAAAAGTTCAAGATGAATGTAATTCTATGCTCGAAACCCAGCATTTGACGTTAAAACAGATTTGACATTACTTTTCAATAATGGAAATTAACTTATTAGCTTCTTAGTTTCCAATAGCATCTGGAAGATTCGTGTTACACATGCTTTATATCTATTTTACATAGTAGTAGGTTCTACATATTTACATACTTCTTGTATAGCTAGCTGTTCCAAAATTTCTGTTTAGGATGACCAGTTAATCACTTAATGCTCAGATTGTGCTTCTGTAGTGGAAAGCTAAATTGACAGTAGACATATCCTTTATCTTGTTTATTTGTGCATTGAACTATATGCATGTATTTGCGCAGATATGAGAAGGAATGGACCCATCCTGTTAAGAATCTTTTCGGTGGAGAGTTAGCATATGCCATGCTTATCCAGGTTAGTTCACTTGACTCTATTTTGGATGCATCGAATATTCCACTTCATGATATTTCCTATTCTCACCTTCAACTTTGAACATTCAGCTTCAGAAGCGCACAGTGGATATCAAGCAGTAAGTTATACTATTTCTGTCTGACAATAATAACTAAAATGCATAAAGATATATTTTTCTTGTCTAATATTCATCAACAGATGTAATTGGATTCTTCTTACACAGGGCAATGCTGGAACTGGATCAGATTCTTAAAGGAAATGCGATAAACTTCGCTATTCTTGCAGCTTTACCTGCATTTGGTGTTTCGCTTTTGCTCCTCACTGTGGTGCAAGCATGGATTATGAATGTATGTTAATAGAGTTCCGTGATTCTATCACTCTCTCTTTGAAATATCATCATCTGTCAGAAGTATCTGTAGGTCTGTGGGGCCTTGTTGTGTTTCCCTGTAACCTATTTGTGCCACAGATCTTTGCAGTATGTGGACATGCGTGTAGAAAAGCAAAAAAATATGGTGACTAATGTCTTAATTATAAATTAGGACCAAGGCGCCGAGGGAAGAGGCAGGATTGCACGGCGCCAAAGAAGGCTGCTGCTTCTTGATGCAGAGAGAAAACTTATGGAGTTTAAAAATTGCATGATTAATGGAATGGTAATGTTATCTACATCTATATGAGTTGCTCTTTAGGATTCATTCTCTCAATCTTTAAAGAGCTTTTCGGCCTAAATTTGTTGACTGAGAATGCTTCTTTTGTATCGATGACAAAGCCACTTTGATGAGTGCTCCCTCTTATTATTATTAACTTTTGGATTATAAATTTAATAATATTGGAATGAGGGGCACCCTTTACAAATGATGCCTCTGAATTTCTTCCTTTACAGGAGGAAGAGGCATGCTGTAAGTTCGGATTAACACTGTACAACCTTGATAGATTATACAGAGCTGTTGAATCACATGCAGAAGAAACAGGCGAGTGGTCAAGGTCAGTATCAACTCATATTCCTTACCATTTGATTCCTGGTTACTCTGGATGACCTTTCCACAAAATCGTTTGTGTTGCAGATTAAGAGGAGACATTTTGGATCTGGCGAAACCTAAGATGAGTATGACAGACAAGCTGGTGGTTCTTTCACGACTGAAGGGAACGTATGACTGCTTTCCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA012742