BGIOSGA010122

From RiceWiki
Revision as of 15:32, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA010122

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA010122, complete gene.

LocusTag

OsI_12855

Ensembl Transcript ID

BGIOSGA010122-TA

Ensembl Protein ID

BGIOSGA010122-PA

Length

3643

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:29477935..29481577

Sequence Coding Region

29481290..29481577,29479331..29479454,29478692..29479136,29477935..29478145

Genome Context

<gbrowseImage1> name=IndicaChromosome03:29477935..29481577 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:29477935..29481577 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGAACTCGTACAGCAATGTCGGCTCGCCGACGGCGGCGGGGTATGTGCAGGCGCCGGAGCTGCCGCTGCACCTGTGCTTCTTCCTGGTGGTGCTGCTCGTCTTCCTCGGATTCTCGTGGTACATGAGCTACGAGTCGGCAGCAGAGCGGTTCGCCAACCAGGCGCGGCTCCTGCTGATGGCGTCGCCGCTCGCACTGTTGCTCACCCCCCGGACCCTGCGTCACTCGAGCCGTCGCTGCTCTTCCCGTCGTTGGGCGCAGCCCGGCACCGTGTTCACCATCCCGGCAGCGACCGCTGCCGCGGCGGCGGCTCCCCCGCCGCCTCGCCGCCACGGTTACGCGAACGTCGATCCCCGGTGCGAGTGGACACGCACGGAAGACGCCGACACCCTCGTCGTCGATGTCTCAGGGTTCAGGAAGGAGGAGCTGAAGGTGCTGTACAACACCAGCCGGAAGCTGAAGGTCGCCGGCGAGCGGCGGGCCGACGGCGGCCAATGGGCACGCTTCCTCAAGATGTTTCCGGTCCCGAGGAGCTGCGACGCCGGCGCCATCAGGGCCGTCATGGACAACGAGGAAGCCCTGCTCTACGTCATCCTGCCCAAGGGATCATCGTCTTCTTCCTCCTCCTCCAGGGACAAGAAGGAAGATGAACACAATGTGAGCTCCCAGCCTCAGGGAGAAGCAGCCATGGCGCCCATGGCGGATGGGCCATCAAGCAGCAGCGGCGGCGGTGGCAATCTGTACATCGCCCAGGAAGACGAAGAGATGGGCAAGATTGATGAGAAAGAAGAGGTGATTGCCACGCAGGATGTGCCAAGAACACACGGCGATGTGGATGATGGTAACGGGAGATGGTTTCACCTCGGTGTATTTGCGGGTCTTGAGACCGCGGTCAGGGTTCACCTAGAGGATGTTGGTGTCAAGCACGGCAAGCATCTTGTTGATGCGGTCCGCGATCTCCTCGGTGGAGGGGATCCTGGGGGAGTGGATGTCATACACACCCTCGCGGAAGACGGACAGGAGCTTCTCATCGGTTCGGGAGTTCTCGATGGAGCTCCTGGATAA</cdnaseq>

Protein Sequence

<aaseq>MGNSYSNVGSPTAAGYVQAPELPLHLCFFLVVLLVFLGFSWYMSYESAAERFANQARLLLMASPLALLLTPRTLRHSSRRCSSRRWAQPGTVFTIPAATAAAAAAPPPPRRHGYANVDPRCEWTRTEDADTLVVDVSGFRKEELKVLYNTSRKLKVAGERRADGGQWARFLKMFPVPRSCDAGAIRAVMDNEEALLYVILPKGSSSSSSSSRDKKEDEHNVSSQPQGEAAMAPMADGPSSSSGGGGNLYIAQEDEEMGKIDEKEEVIATQDVPRTHGDVDDGNGRWFHLGVFAGLETAVRVHLEDVGVKHGKHLVDAVRDLLGGGDPGGVDVIHTLAEDGQELLIGSGVLDGAPG</aaseq>

Gene Sequence

<dnaseqindica>1..288#2124..2247#2442..2886#3433..3643#ATGGGGAACTCGTACAGCAATGTCGGCTCGCCGACGGCGGCGGGGTATGTGCAGGCGCCGGAGCTGCCGCTGCACCTGTGCTTCTTCCTGGTGGTGCTGCTCGTCTTCCTCGGATTCTCGTGGTACATGAGCTACGAGTCGGCAGCAGAGCGGTTCGCCAACCAGGCGCGGCTCCTGCTGATGGCGTCGCCGCTCGCACTGTTGCTCACCCCCCGGACCCTGCGTCACTCGAGCCGTCGCTGCTCTTCCCGTCGTTGGGCGCAGCCCGGCACCGTGTTCACCATCCCGGTGTTCCCGGAGCAGTAAGAGGTCACTGCCGCCACCTTCGTCTGCCAGCTCACCCCATCCCCGCCTCTCCTCCCCGCCGTCCTCATCTCCTGCAACGGCCGGCGCGGGCCGTCGAGGCGGAGTCGGAGGTGGCGTGGTCCCGCCGCGGCTGCAATACTGCCCCGCGCTCGCGCCTGGCTGTACGTGACGCACTCCACGACGGCGGTTGAGGCGGCGCCGGTGGTGAATTTGCCGGTGCTTCCCGACACGTGGAGGAGTGCGCCGGCGCGGCGGAGCGTGCTCTGCTCGCGGTGGGTTCGTCGCCGCCACCACCGCTAACGTCACAGGTGGGAGTGAACGGGACGACAGCAGCGTGCGACGTCGTGCTATTCTGCTACTGTCGGGTGAGGCTGAGGCGGCCAGCGTGCGCGGCGCCGGCGGGGAGGGCGGCGAGGAGGCTGGAGAGGTAGTGCTCGTGGCCGGGGGCATTTCAGTACTTTTAACGCTCCCTCTCCTTGTTTTCACCAAAAATAATAAAATAATGTCTCTAGTGTCCAGTAGCTAATTACCACTCTTTTGTGATGTCCTACAGCCAATTCACGTTTTTCAATGTCCCACGGCTAATTACACATTTTTTGAGTGTCCTGTAGTAAATATTGCCTATTTCTTATCAGCCAAAGTGATAAGAAAATAGTCAAGCTTTTTTCGAACGTGCAAAAAATTTACAGATTAATATATTAGAAAAAATAGTCAAGCCTGACGGGATTTATCTTCATGTTGGTTGCCCCCGCCGGGTCCTGACGTCCAACGGTAATGAATTATCATGACGGCTATCCTTAGTGGTGTGCTGACAAAAAGTATTTCTCTATCGATGAGCCATCAGACATTTATCACTTGGTTTCGTTTTACCTATCCTAGGCCATGACAAAAGTTTCGATAAAAAAGTCATATCAAATGTTTAGACACATGCATGTGATATTAAATGTGGAGAAAAAAAAACAATTGCATAGTTTGCATGTAAATTGCGAGACGAATTTTTTGAGCCTAATTACACCATGATTTGACAATGTGATGCTACAGTAAACATTTGCTAATGACGGATTAATTAGACTTAATAAATTTATCTCACAATTTACAGGTGAAATCTGTAATTTGTTCTGTTATTAGTCTACGTTTAATATTTCAAATGCGTATACGTATACTTTAAAAAACTTTACACCCAAAGAACTAAACACGCCCTATGTATATATCCTACTAGCATTAGTGAGTTCTCTTCTATATGTCTATGAGAAATTTTATGGTATCTTCTAGCTTAAAGACCATAAAATTACTTATATATTGTGAATTTAATGTTATGTGAGGAAATAAAAACAGAAGGGGGTATTTTCTGAAGTTAGGCTTCATAACACAGAGGCAACATGCTTGTACGCAGTACTTCAATGTACTCTTATCCAACAACAATAGAAGAAGGTAAATTTCACAATTGCAGTTACACTACGATATGTAGATTCCCAATGTTTGTAGCACGGGAGGCATACCACATACATACATTGTACTTCCCCCAACAAAGGAGCGTACACCTTGAAGTTGATCGGTTGAAGCAAAACATCTGAGACCAGCAGAAGCAAAGAAAGGTGTTTGCCTAGCCTAGCAACTAGTACCATTACCGTATAACTCTTCTAGGAGGCAACACTATCACCAAATATTTATTTCTTACTACTATAATCTAACACTACAATCCAACCCTATATACCCTCGTTGCCATCTGTCTTAACCAATCTTGTTGCTGAAAGTGAAAGAGCCCAAACGAACAGAAAAGTGTACAATATCATCGTGCAAACTCATATATCATGCAGGCAGCGACCGCTGCCGCGGCGGCGGCTCCCCCGCCGCCTCGCCGCCACGGTTACGCGAACGTCGATCCCCGGTGCGAGTGGACACGCACGGAAGACGCCGACACCCTCGTCGTCGATGTCTCAGGTAAAAAATAAAATTCATGATTGTACCACGACTCGTGGTTCACATTTTTGGATAAGAAATTTCCGAAAAAAAAAACACCCGAACTTATCTGAATTATTCAGCATAAAATTTCTTGGAATTCAGCCAAAAAACTGTTGAATGACTTGCGAATTGCCTCTCGTGAGGGATTTATTTATTTGTTTTGTTGGTTTCAGGGTTCAGGAAGGAGGAGCTGAAGGTGCTGTACAACACCAGCCGGAAGCTGAAGGTCGCCGGCGAGCGGCGGGCCGACGGCGGCCAATGGGCACGCTTCCTCAAGATGTTTCCGGTCCCGAGGAGCTGCGACGCCGGCGCCATCAGGGCCGTCATGGACAACGAGGAAGCCCTGCTCTACGTCATCCTGCCCAAGGGATCATCGTCTTCTTCCTCCTCCTCCAGGGACAAGAAGGAAGATGAACACAATGTGAGCTCCCAGCCTCAGGGAGAAGCAGCCATGGCGCCCATGGCGGATGGGCCATCAAGCAGCAGCGGCGGCGGTGGCAATCTGTACATCGCCCAGGAAGACGAAGAGATGGGCAAGATTGATGAGAAAGAAGAGGTGATTGCCACGCAGGATGTGCCAAGAACACACGGCGATGTGGATGATGGTAACGGGAGATGGTGGCAGAGGGTCAGGCCTATGAATGTTCTTGGCGTTGCTCTCATCCTTGCAGTGGCTTGCGTTGGAGCCTATGTGCTGTGCTTGATGCTGCTGTGAATCGTAGCATGTGAATTAATCGCTTGTGTAAATGTGTTTGTTGCTCATGTGAATTACAATTGTCACTGTTAGCTTGGGACTGGTTTGCTACATACGAGCTCATCAATGAATGTGAATACAATAACATATATGGCATTCTGCTTTCCTAGTGTTAGATTCTAGTTGTAAATTGTAACGCTTCTGTTTTGCAATTCAACTCATGGAGCTCAGAAAAGGAAACAGTGGACGATGCAATTCGATGCGAATTTGTGATTCTGTTTTGTTCTAAGAGAAGACAATGCCCCAAACGCAGCCTCAAATTACCCACCAAATGGCGATGTTGGCTCTTTTCAACAAGCAAAGATAAGCACTATTGGACACCTCAATTTTGCACTATTGGAAATCTCATTTTGCGCTGGCAAGCTGGGTGCGGATGAGCTTGGCAGCATCTACCATGTTGGTTAGTGCAGGTTTCACCTCGGTGTATTTGCGGGTCTTGAGACCGCGGTCAGGGTTCACCTAGAGGATGTTGGTGTCAAGCACGGCAAGCATCTTGTTGATGCGGTCCGCGATCTCCTCGGTGGAGGGGATCCTGGGGGAGTGGATGTCATACACACCCTCGCGGAAGACGGACAGGAGCTTCTCATCGGTTCGGGAGTTCTCGATGGAGCTCCTGGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA010122