BGIOSGA009589

From RiceWiki
Revision as of 15:30, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA009589

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA009589, complete gene.

LocusTag

OSJNBB0033J23.4

Ensembl Transcript ID

BGIOSGA009589-TA

Ensembl Protein ID

BGIOSGA009589-PA

Length

3411

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 3

Location

Chromosome 3:38284036..38287446

Sequence Coding Region

38286904..38287446,38285583..38286449,38285040..38285183,38284036..38284944

Genome Context

<gbrowseImage1> name=IndicaChromosome03:38284036..38287446 source=RiceIndica03 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome03:38284036..38287446 source=RiceIndica03 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTTGTCCGGGGAAGCAAGCCTCGGGGGATTCAAGATCGGGCCATCGACGCTCGTCGGCCGCGGGGTAGCCATCCGCGTGCTCCTCCTCAGCTCGCTGTGGCGCCTGCGCGAGCGCGCCTACGCCGCCGCCTCGCGCGTGCGCGGCGCGGCGCTTCCGGTGGTCGCGCCCTGGCTCCACCTCAGGAACACCCATGGCATCCTCCTCGTGGTTGTCCTCTTCGCGCTGTTCCTGAGGCGGCTCTCTGGCGCGCGGTCGCGGGCGGCGCTGGCGCGCCGGCGGTTGCAGTGCAAGAAGGCGATGAGGTACGCGGCGAGCTACGAGGAGTGGGCGCGCGCCGCCAAGGTGCTCGACAAAATGTCTGAGCAGGTCAGTGAGAGCGATTTCTACGACGAGGAGCTCATCAGGAACAGGCTGGAGGAGCTCCGAAGGCGGAGGGAGGAAGGGTCGCTCCGGGATGTGGTGTTCTGCATGCGTGGTGATCTTGTGAGGAATTTGGGGAACATGTGCAATCCCGAGCTTCATAAGGGCAGGCTTGAGGTTCCTAAGCTTATAAAAGATTACATTGATGAGGTTTCTGCCCAGCTGAAAATGGTATGTGAATCTGATACCGATGATTTGCTTTTGGAAGAGAAACTTGCCTTTGTTCAAGAGACCAGGCATGCCTTTGGGAGGACAGCATTACTCTTAAGTGGGGGTGCTTCACTGGGATCTTTTCATGTAGGTGTAGTGAAAACACTGGTTGAGCACAAGCTTTTGCCTCGAATAGTTGCAGGATCTAGTGTTGGTTCCATTATATGTTCAATTGTTGCGACCCGAACATGGCCTGAGATCCAGAGCTTCTTTGTAGACTCATTGCAGACCTTGCAGTTCTTTGATAGGATAGGTGGAATTTTTGCAGTAACAAAACGGGTTATGACTTATGGTGCACTCCATGACATTAGCCAGATGCAAAGGCTTTTGAGGGATCTGACAGGTAACTTAACATTTCAAGAGGCTTATGACATGACTGGCCGTGTTCTTGGCGTCACAGTTTGCTCTCCTAGAAAAAATGAGCCACCCCGCTGCCTCAACTACCTGACATCACCACATGTTGTTATTTGGAGTGCCGTGACTGCCTCTTGTGCATTTCCTGGGCTCTTCGAAGCTCAGGAATTGATGGCAAAGAATAGATTTGGTGAGATAGTTCCCTTCCACGCACCCTTTTCCACAGACCCAGAGCAAGGTCCTGGAGCATCAAAGCGTCGGTGGAGGGATGGAAGTTTGGAGATGGATCTGCCCATGATGCAACTCAAAGAGTTGTTCAACGTAAATCACTTCATTGTGAGCCAAACTAATCCTCACATCTCTCCACTCCTCCGACTGAAGGAGATTGTCACAACCTATGGAGGTCGCTTCGCTGGAAAGCTTGCTCGTCTGGCTGAAATGGAGGTTAAGTACAGATGTAACCAAATCCTAGAAATTGGCCTCCCACTGGGAGGACTAGCGAAATTGTTTGCTCAGGATTGGGAGGGTGATGTCACCATGGTTATGCCGGCAACAGCAGCCCAGTACTTGAAGATTATACAAAACCCTACATATGCGGAGCTGCAAATGGCTGCCAACCAGGGGCGCAGGTGCACATGGGAGAAGATCTCTGCGATCAGAACAAACTGTGCTATTGAACTTGCGTTGGATGAGTCCATTGCCGTTCTAAACCATAAAAGAAGACTAAAGAGAAGCATGGAAAGGGTAGCTTCTGCTTCCCAGGGATATACATGCAGTTCTGTAATCAGAACACCAAGGAGGGTACCATCGTGGAGCTGCATCAGTCGAGAGAATTCTACAGGATCTCTCTCAGAAGATTGTTTTGCAACCACTAGTTCATCTACTCACCAAGGAATTCAAGTTGTTGCCACACCGAACGTTATTCATAATGATGGAAGTGAGAGTGAATCAGAAACCATTGACTTAAATTCTTGGACCCGGAGTGGTGGACCTCTAATGAGGACTTCATCAGCTGACATGTTCATCAATTTCATTCAGAATCTTGAGATAGAGTCTGAGTTCAATACAGGTAATTCATCAGGATCTACCGTTTCTAAAGATTCATGCCCAAACAATAATTCTGGAGTTACTGCACAAGGTACAGATAGAAGCACAGACACATCTGAAACTGGTTCATACAATACTGGCAACAATATAGCTAGTCAACCCTCTACCTCTACAAGCATTGCTGTTTCTGAAGGAGAACTGCTGCAACCAGAAAGGAGTACTAACGGAATTCTAATTAATGTTGTCAAAAGAAAGAGTGTGTTTGGTGAGCATGAAAGCGAAGCTGAAACCGAATCATATGTGGACACAACAAATTTGGACACTTCTGACTGTCCTGGAGATAACAAAGATGCAGCTGACTCAAACGATCTTTCAGCTGCTCATACTGATTCTGTGACTTCACAACATTCTTCAGCTGATGAATAG</cdnaseq>

Protein Sequence

<aaseq>MDLSGEASLGGFKIGPSTLVGRGVAIRVLLLSSLWRLRERAYAAASRVRGAALPVVAPWLHLRNTHGILLVVVLFALFLRRLSGARSRAALARRRLQCKKAMRYAASYEEWARAAKVLDKMSEQVSESDFYDEELIRNRLEELRRRREEGSLRDVVFCMRGDLVRNLGNMCNPELHKGRLEVPKLIKDYIDEVSAQLKMVCESDTDDLLLEEKLAFVQETRHAFGRTALLLSGGASLGSFHVGVVKTLVEHKLLPRIVAGSSVGSIICSIVATRTWPEIQSFFVDSLQTLQFFDRIGGIFAVTKRVMTYGALHDISQMQRLLRDLTGNLTFQEAYDMTGRVLGVTVCSPRKNEPPRCLNYLTSPHVVIWSAVTASCAFPGLFEAQELMAKNRFGEIVPFHAPFSTDPEQGPGASKRRWRDGSLEMDLPMMQLKELFNVNHFIVSQTNPHISPLLRLKEIVTTYGGRFAGKLARLAEMEVKYRCNQILEIGLPLGGLAKLFAQDWEGDVTMVMPATAAQYLKIIQNPTYAELQMAANQGRRCTWEKISAIRTNCAIELALDESIAVLNHKRRLKRSMERVASASQGYTCSSVIRTPRRVPSWSCISRENSTGSLSEDCFATTSSSTHQGIQVVATPNVIHNDGSESESETIDLNSWTRSGGPLMRTSSADMFINFIQNLEIESEFNTGNSSGSTVSKDSCPNNNSGVTAQGTDRSTDTSETGSYNTGNNIASQPSTSTSIAVSEGELLQPERSTNGILINVVKRKSVFGEHESEAETESYVDTTNLDTSDCPGDNKDAADSNDLSAAHTDSVTSQHSSADE</aaseq>

Gene Sequence

<dnaseqindica>1..543#998..1864#2264..2407#2503..3411#ATGGATTTGTCCGGGGAAGCAAGCCTCGGGGGATTCAAGATCGGGCCATCGACGCTCGTCGGCCGCGGGGTAGCCATCCGCGTGCTCCTCCTCAGCTCGCTGTGGCGCCTGCGCGAGCGCGCCTACGCCGCCGCCTCGCGCGTGCGCGGCGCGGCGCTTCCGGTGGTCGCGCCCTGGCTCCACCTCAGGAACACCCATGGCATCCTCCTCGTGGTTGTCCTCTTCGCGCTGTTCCTGAGGCGGCTCTCTGGCGCGCGGTCGCGGGCGGCGCTGGCGCGCCGGCGGTTGCAGTGCAAGAAGGCGATGAGGTACGCGGCGAGCTACGAGGAGTGGGCGCGCGCCGCCAAGGTGCTCGACAAAATGTCTGAGCAGGTCAGTGAGAGCGATTTCTACGACGAGGAGCTCATCAGGAACAGGCTGGAGGAGCTCCGAAGGCGGAGGGAGGAAGGGTCGCTCCGGGATGTGGTGTTCTGCATGCGTGGTGATCTTGTGAGGAATTTGGGGAACATGTGCAATCCCGAGCTTCATAAGGGCAGGCTTGAGGTAATTAGCAAACCTTCTCTTTCTTGTACTAGTTCATGCTATTATATTAGTGTAATATTTTACATCGAGGTTTATATGTCTGATCCCTCTTTATCATAGATATGCATATTTAGTCATTCTATGATGACTGCCCTGGAGACATTTGTGCTTCTTATTTGGTCAGGTTCTGAAATTGCGCGCAAATGGCATGTACATATTCAGTCATACCAGGGATAATTATCTTGAATATGCTTGTGCATCTTATTTGATCAAATATTATATAATTGATGTAGCTCATTTTTTTTCCCTTGTAGTATGTGTTCCTAAAATGTTTCCACAGCTCTCACTATTTGTTTCGGTATTGCACACATAAAAGGATTGCTTGCTGTCAACTGGGATTTTCGCACTCCCTATCATGAAATGTTAAAATACTCCTTTCCATTCTGTCTAAAAAAAATGATTTGTTGTAATGCAGGTTCCTAAGCTTATAAAAGATTACATTGATGAGGTTTCTGCCCAGCTGAAAATGGTATGTGAATCTGATACCGATGATTTGCTTTTGGAAGAGAAACTTGCCTTTGTTCAAGAGACCAGGCATGCCTTTGGGAGGACAGCATTACTCTTAAGTGGGGGTGCTTCACTGGGATCTTTTCATGTAGGTGTAGTGAAAACACTGGTTGAGCACAAGCTTTTGCCTCGAATAGTTGCAGGATCTAGTGTTGGTTCCATTATATGTTCAATTGTTGCGACCCGAACATGGCCTGAGATCCAGAGCTTCTTTGTAGACTCATTGCAGACCTTGCAGTTCTTTGATAGGATAGGTGGAATTTTTGCAGTAACAAAACGGGTTATGACTTATGGTGCACTCCATGACATTAGCCAGATGCAAAGGCTTTTGAGGGATCTGACAGGTAACTTAACATTTCAAGAGGCTTATGACATGACTGGCCGTGTTCTTGGCGTCACAGTTTGCTCTCCTAGAAAAAATGAGCCACCCCGCTGCCTCAACTACCTGACATCACCACATGTTGTTATTTGGAGTGCCGTGACTGCCTCTTGTGCATTTCCTGGGCTCTTCGAAGCTCAGGAATTGATGGCAAAGAATAGATTTGGTGAGATAGTTCCCTTCCACGCACCCTTTTCCACAGACCCAGAGCAAGGTCCTGGAGCATCAAAGCGTCGGTGGAGGGATGGAAGTTTGGAGATGGATCTGCCCATGATGCAACTCAAAGAGTTGTTCAACGTAAATCACTTCATTGTGAGCCAAACTAATCCTCACATCTCTCCACTCCTCCGACTGAAGGAGATTGTCACAACCTATGGAGGTCGCTTCGCTGGAAAGGTTTGTCTAAAACCCTACCCTATGGAATAGGCACCTTAATGGCATTAGCTTCATGGCTTGTATGGCTTATCCTAGCATGCAGCCTGTAGGTAACCTTGTAGGTAGTTAATTGTTTTCATGTTCTTCGGCATTATTTCGTCAATTTTCCACATGCTGCTGCGCATGCATGATTATTCATGGAAATAATGCAATATCTGGTAGATCGAGGGTTTTATTCAGTATGCAAATAAAGTTATTTTATAAATACATATGCACCTGATTTATGTTCCCTTAACACTAGACAAAAAATTATCTTTAAAATTTAGATTCCTACTCTGCAAATGCCGTGTTATATGTTCCCAGACAAGTTCTCTTTAAAATCTTGATTCCTAAGTGCTGTGTTTAATCTCATTTGTGTAGCTTGCTCGTCTGGCTGAAATGGAGGTTAAGTACAGATGTAACCAAATCCTAGAAATTGGCCTCCCACTGGGAGGACTAGCGAAATTGTTTGCTCAGGATTGGGAGGGTGATGTCACCATGGTTATGCCGGCAACAGCAGCCCAGGTATTTTTGTCGATAAATTAATTTTTGGTTATATGGGCGAGTGCTAATTCTTTGGTCATAATTCTTTTTCTTTGCTGTATTTTCCCAATTTTCAGTACTTGAAGATTATACAAAACCCTACATATGCGGAGCTGCAAATGGCTGCCAACCAGGGGCGCAGGTGCACATGGGAGAAGATCTCTGCGATCAGAACAAACTGTGCTATTGAACTTGCGTTGGATGAGTCCATTGCCGTTCTAAACCATAAAAGAAGACTAAAGAGAAGCATGGAAAGGGTAGCTTCTGCTTCCCAGGGATATACATGCAGTTCTGTAATCAGAACACCAAGGAGGGTACCATCGTGGAGCTGCATCAGTCGAGAGAATTCTACAGGATCTCTCTCAGAAGATTGTTTTGCAACCACTAGTTCATCTACTCACCAAGGAATTCAAGTTGTTGCCACACCGAACGTTATTCATAATGATGGAAGTGAGAGTGAATCAGAAACCATTGACTTAAATTCTTGGACCCGGAGTGGTGGACCTCTAATGAGGACTTCATCAGCTGACATGTTCATCAATTTCATTCAGAATCTTGAGATAGAGTCTGAGTTCAATACAGGTAATTCATCAGGATCTACCGTTTCTAAAGATTCATGCCCAAACAATAATTCTGGAGTTACTGCACAAGGTACAGATAGAAGCACAGACACATCTGAAACTGGTTCATACAATACTGGCAACAATATAGCTAGTCAACCCTCTACCTCTACAAGCATTGCTGTTTCTGAAGGAGAACTGCTGCAACCAGAAAGGAGTACTAACGGAATTCTAATTAATGTTGTCAAAAGAAAGAGTGTGTTTGGTGAGCATGAAAGCGAAGCTGAAACCGAATCATATGTGGACACAACAAATTTGGACACTTCTGACTGTCCTGGAGATAACAAAGATGCAGCTGACTCAAACGATCTTTCAGCTGCTCATACTGATTCTGTGACTTCACAACATTCTTCAGCTGATGAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA009589