BGIOSGA008621

From RiceWiki
Revision as of 18:52, 20 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA008621

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA008621, complete gene.

LocusTag

OJ2055_H10.29

Ensembl Transcript ID

BGIOSGA008621-TA

Ensembl Protein ID

BGIOSGA008621-PA

Length

2684

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:26035180..26037863

Sequence Coding Region

26035180..26037017,26037200..26037260,26037402..26037863

Genome Context

<gbrowseImage1> name=IndicaChromosome02:26035180..26037863 source=RiceIndica02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome02:26035180..26037863 source=RiceIndica02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCGGAGATGGAAGGAGCTCTGAGATCCTGCATGGAGCAGCTGCTCATCGCCAGGGAGGAGCGGGAGCAGATCATCGTGGAGGCGGCCAGCGAGATCTCCTCGGAGAAGAAGAAAGCGCGGGAGCTCCAGCGGAAGCTCGACGCCGCGACCAAGAAGGCCGCGAAGCTCGCCGCCGAGAACAGCAGCCTCGCCAAGGCCCTCGACGCCAAGGACGCGGCGATCGGCGAGCTGAGGGAGTCCAAGTCGGCCTCCGACGGCGAGCTCGCCGGCGCGAGGGCGAGGCTGGACGCGGCGCAGAAGCAGGCCGCGTCGCTGCAGTACGAGGTGCGGATGCTGCAGAAGGAGCTGGAGATCAGGGGCCAGGAGCGGGAGTACGACCTCCAGTCCGTCGACGCGTCGCGCCGGCAGCAGGCGGATAGCCAGAAGAAGATCGCGCTGCTGGAGGGCGAGTGCCAGCGGCTGCGCGCCATGGTGCGGAAGCGCCTCCCGGGCCCCGCCGCCATTGCCAAGATGAGGGACGAGGTGGACCAGCCGGCGACCCCGAGAAGGTCGCGCTCCGTGGCGCCGATGTCGCCGCGGTCCGTGGCGGCGCCGATGACACCCATGTCGACGTCGGCGCGGCCGATGACTCCCACCATGTCAGCGCGGCCAATGACGCCCATGTCGGCGCGGCCGATGACCCCGCGCCGTGCCGCCGCGGCGGAGCACGAGACGCACGCGGCGGCGGCCAAGCTGCGCGCCGTCGAGGACGAGAACAAGGCGCTGAAGCAGACGCTGGCGAAGAGGGACGCCGAGCTGCAGTTCGTGCAGATGAAGTACGCCGACGAGGCGTGCAAGCTCTCCGTGCTGCAGCGGCAGCTCAGCGAACTGACCGAGGAGAACAAGCAGCTGAGCGACGCCCATGGCCAGACCGAGTCGTGGGCCTCCGCGCTGATCTCTGAGCTGGAGCAGTTCAGGGCCGCGAAGCTGCAGGGAGCAGCAGCATCTGAGATGAGCTTGCTCGACGATTTCGCCGAGATCGAGAGGTTGGAGATGGCTTCGGGTGGCCAAGGATTGAGATCGCCCAAGAATGCGCATTCGGAAGCGATTTCTTCAGAGAAGAATGGCAAAGACACTGTCATAGAAAATTGTGTCTCCAATGGTCAGCCTGAATGGGTTCAGGATATGTGCAAGCTTGTGATGCAGAAGCATGAAACCAGTGGGGAAAACATTGACACAATTCTTGAGGAGATAACTCGTGCATTGGATCAGAGTGCTAATAATCAGAAAGGAGATGATCTGAATGGATCATATGACTGGAGCATAGTGAAGGAAATGGTGTCCAGCCTGACCGAAAAGATCACCTCTGTTATTGGCATATCTGAAGAAGGCAATGTTGCAAGTTCTGAAAAACTGCTGCTTGACAGGTCTGAATTTTGTGCTCGCCTTGAGCATTTGGTCCATGTCTGTCATGACCTACTGCATGGAGAAACTGACCTTGAAAAGTTTGTGCATGAGGTTTGTTTGGTTCTAGAGTATATAATCAACCAGTACAAGAATATATCATTCCAAGAACAATCAGACACTGTGAATAATGATGCAGAGAATTTGGATGGAGAGGGATCATTTAGTAACATGAATGGTGGATGTGACATAAACAGTCCGAAATCAGCATCTGCTCTAGACATACAAACTGAAGCACTGGAAGAATCACTTCAGTCAGTAGAAGGCCGGAAAACAGATCATATTTTGGTTAACCAAGAAGAGAGTCAACTTGATGAAGAACTCACAAGAGTTATACTAGACCAGGACGAGAAAATCAGTCAGGGGAACTCAGCATCCTGTGAGATAGAAAGCCCCCATGATCATCCAAGTGCTGAAACCCTGGCAGAGAAAGAGGAAAAGAATTTAGCATCAAGTACAGAGATATCAGCAGCAGCTGAGAAGCTTGCAGAGTGTCAGGAAACCATCACAAATCTAAGCAGGCAGCTGCGAGCTCTCAAGAGTCCGGCAGTTTCAGGCAATCTAGACAGCCCAATGTCCAACTCCAGACCAAGCTCATCTGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTGTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTGGAAGAGGAATTAACACAAGCCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGACTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGTAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAG</cdnaseq>

Protein Sequence

<aaseq>MSEMEGALRSCMEQLLIAREEREQIIVEAASEISSEKKKARELQRKLDAATKKAAKLAAENSSLAKALDAKDAAIGELRESKSASDGELAGARARLDAAQKQAASLQYEVRMLQKELEIRGQEREYDLQSVDASRRQQADSQKKIALLEGECQRLRAMVRKRLPGPAAIAKMRDEVDQPATPRRSRSVAPMSPRSVAAPMTPMSTSARPMTPTMSARPMTPMSARPMTPRRAAAAEHETHAAAAKLRAVEDENKALKQTLAKRDAELQFVQMKYADEACKLSVLQRQLSELTEENKQLSDAHGQTESWASALISELEQFRAAKLQGAAASEMSLLDDFAEIERLEMASGGQGLRSPKNAHSEAISSEKNGKDTVIENCVSNGQPEWVQDMCKLVMQKHETSGENIDTILEEITRALDQSANNQKGDDLNGSYDWSIVKEMVSSLTEKITSVIGISEEGNVASSEKLLLDRSEFCARLEHLVHVCHDLLHGETDLEKFVHEVCLVLEYIINQYKNISFQEQSDTVNNDAENLDGEGSFSNMNGGCDINSPKSASALDIQTEALEESLQSVEGRKTDHILVNQEESQLDEELTRVILDQDEKISQGNSASCEIESPHDHPSAETLAEKEEKNLASSTEISAAAEKLAECQETITNLSRQLRALKSPAVSGNLDSPMSNSRPSSSDYKPQSLACILAEGEDSSTEDAICPATKEVHSKKEPDAASRKSVAQDGSVNAALKAVEEELTQAVVHPIFPEPSQETISADLKKKRRSPSLLGRIMFRKKVEGS</aaseq>

Gene Sequence

<dnaseqindica>1..1838#2021..2081#2223..2684#ATGTCGGAGATGGAAGGAGCTCTGAGATCCTGCATGGAGCAGCTGCTCATCGCCAGGGAGGAGCGGGAGCAGATCATCGTGGAGGCGGCCAGCGAGATCTCCTCGGAGAAGAAGAAAGCGCGGGAGCTCCAGCGGAAGCTCGACGCCGCGACCAAGAAGGCCGCGAAGCTCGCCGCCGAGAACAGCAGCCTCGCCAAGGCCCTCGACGCCAAGGACGCGGCGATCGGCGAGCTGAGGGAGTCCAAGTCGGCCTCCGACGGCGAGCTCGCCGGCGCGAGGGCGAGGCTGGACGCGGCGCAGAAGCAGGCCGCGTCGCTGCAGTACGAGGTGCGGATGCTGCAGAAGGAGCTGGAGATCAGGGGCCAGGAGCGGGAGTACGACCTCCAGTCCGTCGACGCGTCGCGCCGGCAGCAGGCGGATAGCCAGAAGAAGATCGCGCTGCTGGAGGGCGAGTGCCAGCGGCTGCGCGCCATGGTGCGGAAGCGCCTCCCGGGCCCCGCCGCCATTGCCAAGATGAGGGACGAGGTGGACCAGCCGGCGACCCCGAGAAGGTCGCGCTCCGTGGCGCCGATGTCGCCGCGGTCCGTGGCGGCGCCGATGACACCCATGTCGACGTCGGCGCGGCCGATGACTCCCACCATGTCAGCGCGGCCAATGACGCCCATGTCGGCGCGGCCGATGACCCCGCGCCGTGCCGCCGCGGCGGAGCACGAGACGCACGCGGCGGCGGCCAAGCTGCGCGCCGTCGAGGACGAGAACAAGGCGCTGAAGCAGACGCTGGCGAAGAGGGACGCCGAGCTGCAGTTCGTGCAGATGAAGTACGCCGACGAGGCGTGCAAGCTCTCCGTGCTGCAGCGGCAGCTCAGCGAACTGACCGAGGAGAACAAGCAGCTGAGCGACGCCCATGGCCAGACCGAGTCGTGGGCCTCCGCGCTGATCTCTGAGCTGGAGCAGTTCAGGGCCGCGAAGCTGCAGGGAGCAGCAGCATCTGAGATGAGCTTGCTCGACGATTTCGCCGAGATCGAGAGGTTGGAGATGGCTTCGGGTGGCCAAGGATTGAGATCGCCCAAGAATGCGCATTCGGAAGCGATTTCTTCAGAGAAGAATGGCAAAGACACTGTCATAGAAAATTGTGTCTCCAATGGTCAGCCTGAATGGGTTCAGGATATGTGCAAGCTTGTGATGCAGAAGCATGAAACCAGTGGGGAAAACATTGACACAATTCTTGAGGAGATAACTCGTGCATTGGATCAGAGTGCTAATAATCAGAAAGGAGATGATCTGAATGGATCATATGACTGGAGCATAGTGAAGGAAATGGTGTCCAGCCTGACCGAAAAGATCACCTCTGTTATTGGCATATCTGAAGAAGGCAATGTTGCAAGTTCTGAAAAACTGCTGCTTGACAGGTCTGAATTTTGTGCTCGCCTTGAGCATTTGGTCCATGTCTGTCATGACCTACTGCATGGAGAAACTGACCTTGAAAAGTTTGTGCATGAGGTTTGTTTGGTTCTAGAGTATATAATCAACCAGTACAAGAATATATCATTCCAAGAACAATCAGACACTGTGAATAATGATGCAGAGAATTTGGATGGAGAGGGATCATTTAGTAACATGAATGGTGGATGTGACATAAACAGTCCGAAATCAGCATCTGCTCTAGACATACAAACTGAAGCACTGGAAGAATCACTTCAGTCAGTAGAAGGCCGGAAAACAGATCATATTTTGGTTAACCAAGAAGAGAGTCAACTTGATGAAGAACTCACAAGAGTTATACTAGACCAGGACGAGAAAATCAGTCAGGGGAACTCAGCATCCTGTGAGATAGAAAGGTAAATAACACTGAACACATTTAATAATAATCTGTTCATGTGCAATTAAGTTAGATGAGAATGGTGAAAAATTGTGTTACCCTTTAAGTTACTGAGAAATTAAGTTACTGCAATTAAGTTACAGTACCAATTTTACTGCTACCGAGAAATTGTGTACCATCATGCCATTTTTTTAAATGCAGCCCCCATGATCATCCAAGTGCTGAAACCCTGGCAGAGAAAGAGGAAAAGAATTTAGCATCAGTAAGTTTCTCTGTTGCTCCTATAATTTTCAGTAATCATATGCATATAAATCATACAGGTCTCTGGTGTGCCTTTTTCACCATTCTCATCTATATATAATACGTTTGTCTGAACTTAATCACGAAGTTTGAGCTTATGCAGAGTACAGAGATATCAGCAGCAGCTGAGAAGCTTGCAGAGTGTCAGGAAACCATCACAAATCTAAGCAGGCAGCTGCGAGCTCTCAAGAGTCCGGCAGTTTCAGGCAATCTAGACAGCCCAATGTCCAACTCCAGACCAAGCTCATCTGACTACAAGCCCCAGTCACTTGCATGCATTCTTGCTGAAGGGGAGGACTCCAGCACTGAGGATGCCATTTGTCCTGCAACCAAAGAGGTGCACTCCAAGAAAGAGCCTGATGCTGCATCACGGAAAAGCGTAGCACAAGATGGTAGTGTTAATGCTGCCCTCAAAGCTGTGGAAGAGGAATTAACACAAGCCGTTGTTCATCCGATCTTCCCAGAGCCATCCCAAGAGACTATTTCTGCTGATCTCAAGAAGAAGAGACGGAGCCCCAGCTTGCTGGGTAGGATAATGTTCAGAAAGAAAGTGGAAGGCAGCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA008621