BGIOSGA023012

From RiceWiki
Revision as of 16:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA023012

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023012, complete gene.

LocusTag

OsI_23176

Ensembl Transcript ID

BGIOSGA023012-TA

Ensembl Protein ID

BGIOSGA023012-PA

Length

4650

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:19836407..19841056

Sequence Coding Region

19836407..19836600,19836718..19836863,19837036..19837112,19837203..19837325,19837438..19837540
,19838137..19838186,19840205..19840459,19840517..19841056

Genome Context

<gbrowseImage1> name=IndicaChromosome06:19836407..19841056 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:19836407..19841056 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTTCTCATCATCGCCCCACCGCAGGGCAATGCAGCCTCGTGCAGCCACCGCGCCTCATCACCTGCCTTCTCCTACTGCTTCTTCTTCTGCTTCTGTCGTCGCCACTGACGCTCCCGTGCTCGGCGTCGTCGGCGGTGATCACTCACCTCCCGGGCTTCCATGGCCGCCTGCCATTCTACCTCGAGACTGGGTACATTGGTGTTGAGGAGAAGACTGGCACTGAGCTCTTCTACTACTTCGTTGAATCAGAGAGAAACCCTGACACAGACCCTTTGGTACTGTGGCTAGTGGGTGGGCCCCGTTGTTCGGGCTTCTGTGGCGTTGTCTACGAAGAAGGTCCTTTGAATTTTTTATTGGAAACTTACAATGGTAGTTCGCCAAGATTGGTTTATAATCAGTACTCATGGACACAGATGGCAAGCATAATTTTCTTGGATAGTCCTGTCGGTTCTGGTTTCTCATATGCGCGTGATCCCAACGGTTATGATGTTGGGGATATATCATCTTCTTTACAAGTGGTTACATTTATGAAGGAGTGGCTCAATGATCACCCACGCTATTGCTCACATAATTTCTATGTTGGGGGAGCCTCATATGCTGGAAAGGTGGTTCCAGTTATCACGCAATACATTTCAGAAGGCAGCGGTAACACATTGCAAAGGAGATTTTGTGAACCCAACAAACCAATTGTTCCGCTGGAGATACGTAGAAGCCTAGGAGGTCAGGGTCGCGGCGGTGTGCGCGTTTTGCATCGAAGCCGAGCCGGCGGCGGAGATCAGGATGATGCCAAGAAGGAGCGGGCTGAGCCAGGACGTGCAAGGTTTGGTGTTTGTCGGATTCGTGATGAAGAGGAAGACTCGGCCACGGAGTTATCTATGTGTCGGTCATGGCATGGACACGACCGAAGACAAGCTGGATGGATACCGAGTTCAACATGGGAGGGACAAAGGAACCACGGGATTGCAACAACGCAATCGAAACAAATCACAAGGCAAGGGCGAGATCTTACCTCTGATTTTGTGGGCAGCGTGGTTTGGGGCGGCGAGTTCACGGGCGACTGGAGGCGTCATTGCAGGTGGCGCGCAGCGGCGTGGTGCTCGGCGCGGTTTTCGTCGCAGCTCGGGCAGGAGCTTGCGGCGGCGGCGGCGGCTCCCGGCGGAGGAGTCGGCGTCGGGGTCTTCGGCGACGGCGCTCCAAGGCGGCGCGGCGATTTCTTGCAGGGCCTGCGGCTTCCCGAGGTCCAGCGGTGCAGCGGCTCTTCACGGGGTTGGCGCAGGCGCAGAACGGCGAGGGAGGCGGCGGTGTGCGGTAGCTTCAGCGAGGACGTGGCGCATCGGAGCCGGCGGCCCAAGGCAGCGACGGGCGTAGCACGTGCGCGGCGGCGGCGCATCGGGAGGAAGATGCGCATGCGCAAGAGGAGGAGCGTGGAAGCCGAAGGAAAAAGGGGATCGGCTCGATCTGAGCCGGTCTTTTACCACTGTTGA</cdnaseq>

Protein Sequence

<aaseq>MGSHHRPTAGQCSLVQPPRLITCLLLLLLLLLLSSPLTLPCSASSAVITHLPGFHGRLPFYLETGYIGVEEKTGTELFYYFVESERNPDTDPLVLWLVGGPRCSGFCGVVYEEGPLNFLLETYNGSSPRLVYNQYSWTQMASIIFLDSPVGSGFSYARDPNGYDVGDISSSLQVVTFMKEWLNDHPRYCSHNFYVGGASYAGKVVPVITQYISEGSGNTLQRRFCEPNKPIVPLEIRRSLGGQGRGGVRVLHRSRAGGGDQDDAKKERAEPGRARFGVCRIRDEEEDSATELSMCRSWHGHDRRQAGWIPSSTWEGQRNHGIATTQSKQITRQGRDLTSDFVGSVVWGGEFTGDWRRHCRWRAAAWCSARFSSQLGQELAAAAAAPGGGVGVGVFGDGAPRRRGDFLQGLRLPEVQRCSGSSRGWRRRRTAREAAVCGSFSEDVAHRSRRPKAATGVARARRRRIGRKMRMRKRRSVEAEGKRGSARSEPVFYHC</aaseq>

Gene Sequence

<dnaseqindica>1..194#312..457#630..706#797..919#1032..1134#1731..1780#3799..4053#4111..4650#ATGGGTTCTCATCATCGCCCCACCGCAGGGCAATGCAGCCTCGTGCAGCCACCGCGCCTCATCACCTGCCTTCTCCTACTGCTTCTTCTTCTGCTTCTGTCGTCGCCACTGACGCTCCCGTGCTCGGCGTCGTCGGCGGTGATCACTCACCTCCCGGGCTTCCATGGCCGCCTGCCATTCTACCTCGAGACTGGGTAAGCACTACTCACCGAGAGTCCCATTTTCTTCTACATACTACTACTATACGAGCATAAACTCATCACATAGAATTGGGTACATATGCACGTACATGTGTAATGTATACACAATAGGTACATTGGTGTTGAGGAGAAGACTGGCACTGAGCTCTTCTACTACTTCGTTGAATCAGAGAGAAACCCTGACACAGACCCTTTGGTACTGTGGCTAGTGGGTGGGCCCCGTTGTTCGGGCTTCTGTGGCGTTGTCTACGAAGAAGGTTAGCAGTCCATTAATCACCCCAAACTTTTTTATTTAAGAAAATAATTATTCACCCAAACTAAATCCAATGTTCTAGTCCAAAGGGACTGTTGTGGTGAATATTAATTATTCATACATCTTTTTGTTACGCATATAAATACTAAATATCCATTGGTGATGATTTTTTACAGGTCCTTTGAATTTTTTATTGGAAACTTACAATGGTAGTTCGCCAAGATTGGTTTATAATCAGTACTCATGGACACAGGTGATATATATCCTACTCCGAAACCCTCATGAACTTCCTTTCAACCTTGTTTTTACTTAGTAATTTGTGATTCAAATTTACTGTTATCAGATGGCAAGCATAATTTTCTTGGATAGTCCTGTCGGTTCTGGTTTCTCATATGCGCGTGATCCCAACGGTTATGATGTTGGGGATATATCATCTTCTTTACAAGTGGTTACATTTATGAAGGAGGTAATAAATTTAGAAGCATATTACATACCCTAGTATAGTAAGAATGGAAAAAACTCTATGCCTTTGTGTTCTAGTTTATTACTTAATTATCATCTTGTGCATACTAATGTAGTGGCTCAATGATCACCCACGCTATTGCTCACATAATTTCTATGTTGGGGGAGCCTCATATGCTGGAAAGGTGGTTCCAGTTATCACGCAATACATTTCAGAAGGTAATCAGTGATACACTTCACATACTCTAAAATGAATTAGATGATAAACTAATTGGCAGTTATAACCATATGTTTTAGAACCTCTGTCGTGTTCTTTCAAATATGTATAAAATTGTTCTTTAAAAGTTCAAACTAATCTCAGAAGTCAAATTATGCCGCATGGGAGTGACAAGACTCACCATATTTTTAACTGTTCAACTTGTTTACATGCCAATGAATGATCGTGGTACATTTTTTTAGCTAGTTTCTTACCTTGTCTTATTTTCTTCCTACTCACCAGCAATTGATGAACAAAGGCAACGACCATGGATCGACCTTAAGGCATGCCATTTTATATCTCTCAAACAGTTTATAAAAATTTCGATAATGTGGCTTCATGTCTCTTACTATTTCTTGTGCCTGAATACGAAATCAGTTACAGGGATATATAGTTGGCAACCCCATTACAGGTTCAAAATTTGATAAAAATTTCCATGTTCCCTATTCTCATGGCGTTGGAATCATATCTGATCAATTGTACGAGGTAACTTCATATCTAAACACTCAATTTCAGTGGGGTAACACTACTGCATAACATTTCCTATTTCTCTTTGAAGGCAGCGGTAACACATTGCAAAGGAGATTTTGTGAACCCAACAAACCAATTGTGTGCTAATGTCTTGTCTACTATTCATAAAGTAAGGTTATTGCACTGTACTAATTTCTATGTTTACTAATATTCATCTAGTATTATCTTACTGCACAAATCCCATGTGTAGCTCATGTCTGAAGTTTCGGATGGAAATATCTTAGAGGATAAATGTGTTAAAGCTGCACCAAAACCCACAATAGATGTTTCAGCAAGCAGGGCACTGCTGGAAGAATACAATAAACTCCATCGTTAAATATAAACTCCATCGTTAAATATAAACCAGAACCACGCCCATGCCTAGCTATAATTAATATTGGTACTTTTAGCTTGAGATTATCCATTCATCTCCATAGACCAGCTACAGGATGCACGAGACTCAGCCTATTCATTCGCGGTCCACAACGGGTTCGCACATCAACCCAACTTAACCCGTAGCAATCGGGTTTAGACGGTTTGGTCCAACGGTTTTTCGGGGTTAAACCATCTACTTCTTGTCTTCTTCCTCCTCTGTTCAACTGCCCACGAGAACGAACTAGAGCAAATGAGAAACCATGGATGTTCTCAGCGAGAAGATTGAAAGTTTGTAACAGCTGAGATGGTGCAGGCTCTGCCGGCGCCAGGCATCATGGAGTGGGAGGGGCCGTGCGCGCGGCCGCGCCGCCCATGGGGCCAAGCCGCGTGCCGCCGCTGCCGCCGCCCCGCCGCCGCCGCCCCCGCCGCCGCCGCCGATCTGTCCAAGCCGAGGCGGAGGTGAAGCCGGCGGATGGTCTGCACCTACTGCAACTCGCGGCTCTCGGCATGTGACTCCGACGCCGGCGCCTCCATCAGCAGGGTTGACTAGGGCGGAGAGAGGCTGGCGATGAGAATGTTAGAGTTTGTGTCGAATAAGTGTACGTAGTCGGTTACAGTTTAGGACTTGCAGTTGTAATAGGTACTTAGCGACTAGACCTATGAGTCGGACTCTATCCTAGGTTGTCTCATAAATAGAGGGGTGTGCCTGTTGTTACCACATGGCAACTTAGCATCAGCGAGAGGGAGCGGCTGCCGGCGGCGACCGGCCGTGAGTCGTTGTAACTCTGATACGTTGTATATGCTGGATCGGGGAGGAGCGATCATAATCAGTGCCTCGGAGATGTAGGCTACGGCTAAACTCCGTTACCAAATATCGTGTCTCGGTGTCGTCATCGTTTTGGATCTCCTATGGCGTTTTCTTCCGCGTTTAGCTACCGATGTCGATTTCGGGGCTGGTTTTCTAACAAGTGGTATGAGAGCCTGCAGGAGGTCCATGGTAGAGGCACGATGGAGGTGCTCCACACCGCGTAGCCTGCTATAATGCCTAGGGAGGGGCATTGGCGCAAGGTGGAGCACGGCGGTGAGCAACGGAGTCATGATCGGTGGATCGAACACTTCTGGCGGCGGCCGGAACCGTCGATGGCTGCTTTCAACAGGGAGATGACTAGACTTGGTGCTCGGGTTGATGGCGGCGGAAGCGATTGGCAAATCAATCGGTGGGTCGGACACTTTGGGCGGGTGGCCCGGACTTTCCGGTGAGCTACTCTCGACAGGGAGACGTGCGGCCGCACGCTCGGGTTGATTGAAGCTGGAGGCGATCGGCGTTCTCGATCGGTGGATTCAAACACTCTGGGCGGGGTGGCCCAGGCCTTTCGATGAGTTGCATTCGACAGGGAGACCGCTAGACGTAGCGCTCGGGTCGTTCGGCGGCGGGAAGATGGCATGTGACTGTTGGCTTCGGCTCGCGACTAGTTTGATGGCGTCAATCGGAAGTCGGAGCGGGTGGATCCTATAGGCTGTTTTGGAGGTTTTGACGAGGTATTTGCACGGTAGAATTGCTTCAAAGGCGGCGTATTAGCGGTGGATGGCAGAACTAAGCCTAGGGCGTCTAGACTGGCATCTGGCCCTAGAGAGGTCTGGTTCTACTGTTTCTAGCACAGATCAAGAAAATCACGATGACAATAGATCAGTGGCACTAGTCATTGGTGCAGTCAGCAAGTGGTGTTTGGCGGTGGTGGTAGGTTCCGCTGGAGATACGTAGAAGCCTAGGAGGTCAGGGTCGCGGCGGTGTGCGCGTTTTGCATCGAAGCCGAGCCGGCGGCGGAGATCAGGATGATGCCAAGAAGGAGCGGGCTGAGCCAGGACGTGCAAGGTTTGGTGTTTGTCGGATTCGTGATGAAGAGGAAGACTCGGCCACGGAGTTATCTATGTGTCGGTCATGGCATGGACACGACCGAAGACAAGCTGGATGGATACCGAGTTCAACATGGGAGGGAGTACGATACGGTTTTGATTTGGACACTAAATCGGGTGTTTTCCCCAAATAAAAGTAGCAAAGGAACCACGGGATTGCAACAACGCAATCGAAACAAATCACAAGGCAAGGGCGAGATCTTACCTCTGATTTTGTGGGCAGCGTGGTTTGGGGCGGCGAGTTCACGGGCGACTGGAGGCGTCATTGCAGGTGGCGCGCAGCGGCGTGGTGCTCGGCGCGGTTTTCGTCGCAGCTCGGGCAGGAGCTTGCGGCGGCGGCGGCGGCTCCCGGCGGAGGAGTCGGCGTCGGGGTCTTCGGCGACGGCGCTCCAAGGCGGCGCGGCGATTTCTTGCAGGGCCTGCGGCTTCCCGAGGTCCAGCGGTGCAGCGGCTCTTCACGGGGTTGGCGCAGGCGCAGAACGGCGAGGGAGGCGGCGGTGTGCGGTAGCTTCAGCGAGGACGTGGCGCATCGGAGCCGGCGGCCCAAGGCAGCGACGGGCGTAGCACGTGCGCGGCGGCGGCGCATCGGGAGGAAGATGCGCATGCGCAAGAGGAGGAGCGTGGAAGCCGAAGGAAAAAGGGGATCGGCTCGATCTGAGCCGGTCTTTTACCACTGTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023012