BGIOSGA021084

From RiceWiki
Revision as of 16:34, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA021084

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021084, complete gene.

LocusTag

OsI_23290

Ensembl Transcript ID

BGIOSGA021084-TA

Ensembl Protein ID

BGIOSGA021084-PA

Length

3986

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:21179825..21183810

Sequence Coding Region

21183698..21183810,21183175..21183274,21182613..21182763,21179825..21180222

Genome Context

<gbrowseImage1> name=IndicaChromosome06:21179825..21183810 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:21179825..21183810 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGATGCGGCACTGCCGCGACGACTGCTACCTTGGGCCTCATTTTACGTGCACTCCACTTGACAAGCCATTAATCCCCATCGGCTGCCTCCATGGAAACGGCACAAAGAGGCCCTCGATCATCACGAGCAATATCGGAAAGGCAACGCTGACAATAACAACGCAGGGGCCGGCACTCGATTATCATCGGCGAGATGGTGAAGAGCCTCCGGACTACCCGACAATCTATACTATTGGGGGAAGATGGCCGGACCCCTCCTCCAACCTTCGCCGGCGACAAACCGCCGGAATCAAAGGGGAAGAGGGGCCGGAAGGGAAGAAAATTGAAGGTTACTCTAGCAGGCGGAGGGGAAAGGGGAAAGAGCTACCTGACGATGACGCCGACGACACCGCCGGGGACTCGCAGCAGCGGGCGCGCGTCTCTCCACACTCCAGCGATTGTGCTGGTGGGCGCGCCTGCAACCACCGCCATCATCTCGTCCTACCCCTCAACCATACTGAGGTCCGCATTCCTATCCACCATTCCGATGGGTCCGATACAGCGGCGGCAACGGAGGGTGATGATCGAAGAGCTCGGTCCGACGATAATGATGGCTACGCAAATGATCGGGATTTGAGGGAGGTTTTGGTTTATGGAGGGGGCAGTGGCGCGATGGAGAGGGAGGGGGCGGAGCGAGGGACGGCACAATACGGAGGGAGGACAACCGGAGAAGAAGGCGTGGGTTGGGCGGGATGGGAAGGCGGCGCGTCGGTGGGGTGA</cdnaseq>

Protein Sequence

<aaseq>MEMRHCRDDCYLGPHFTCTPLDKPLIPIGCLHGNGTKRPSIITSNIGKATLTITTQGPALDYHRRDGEEPPDYPTIYTIGGRWPDPSSNLRRRQTAGIKGEEGPEGKKIEGYSSRRRGKGKELPDDDADDTAGDSQQRARVSPHSSDCAGGRACNHRHHLVLPLNHTEVRIPIHHSDGSDTAAATEGDDRRARSDDNDGYANDRDLREVLVYGGGSGAMEREGAERGTAQYGGRTTGEEGVGWAGWEGGASVG</aaseq>

Gene Sequence

<dnaseqindica>1..113#537..636#1048..1198#3589..3986#ATGGAGATGCGGCACTGCCGCGACGACTGCTACCTTGGGCCTCATTTTACGTGCACTCCACTTGACAAGCCATTAATCCCCATCGGCTGCCTCCATGGAAACGGCACAAAGAGGTTTGTTGCTGGGCCGTGGATTTTGGTGTGAGCATCACCAGACTCAGCAAAGGGTTTCCACGGAGTTTGTCATTGAATCTGAGGAGCTTTAACAACAAACCTGTCAACCAAGGTTGCATAGGTGGTTCGAGCAACCCGAATGACAAACCCCGCGTGGTTTCTTCTGTTAGGAAACAAGCAAGAGGGCAAATTCGAAGAACAGTAAACCTTCAGTAAAGGAGCATTTGAAAGGTTGTATGATATCTTCTGTCTTGCTGAGACGACCAAGATGATTAAGGAAGAGGCAGCCTGCAAGTTAAAATTACAAGATCTTGGACAGTGCATGCATCCATCCACAAAGGTCTCAAAGGATTCGGATAAGATGGGGTTGTTGATGCTGAACCTGCTTGGACTGGCTGTAAAATCTTGAACTGTCGTTGTCAGGCCCTCGATCATCACGAGCAATATCGGAAAGGCAACGCTGACAATAACAACGCAGGGGCCGGCACTCGATTATCATCGGCGAGATGGTGAAGAGCCTCCGGTGAGCCATCATCCAGGGAAGATTCTTTAGCTTGAGGAAGAACAGGGATTTGGCGCGTCATGGCAGAAGAAGCAAGCAGTCCCTCCGCTTTGGCTCCATGTCCATCGCATGGGCAGCAGTGTGCACAAGCGGGACAGAGGCCAACGCCGCCGGGAAAACCAGCGGCCCCGTCTCCATCGCTGCCAGGACCGCCTCCACCTAGCCACGCCAGATCTGGAAAGTTCGTCTCCCCCATCAACAGAAGGGACCTTTGCAAAAAGGAGTCTCCGTCGACGGAGATACAATTCGATCCTGAGAAATCAAATTGCCACCACCTCCAACCTTCACTAAATCTAAAGATTTCTAAACCGGACACTGCCATAGGAAGCAACGCCGGTGGACTCTAGAACACGAGACTAGCTCGATTAACAGGACTACCCGACAATCTATACTATTGGGGGAAGATGGCCGGACCCCTCCTCCAACCTTCGCCGGCGACAAACCGCCGGAATCAAAGGGGAAGAGGGGCCGGAAGGGAAGAAAATTGAAGGTTACTCTAGCAGGCGGAGGGGAAAGGGGAAAGGTAAGAACGTTTTTCTGCCTCGTACGTAATTGAGGCGTTGTTTGGATCGCGAAAAAGAAATTTTTGGGTGTTATATTAGACGTTTGACCGGATATCGGAAGAGGTTTTTCTTGACACGAATGAAAAAAAAAACTAATTTCATAACTCGCTCGGAAACCGCGATACAAGTTTATTAAGCCTAGTTAATCTGTCATTAGCATATATGGGTTACTGTAACACTTATAGCTAATCATAGACTAATTAGGTTCAAAATATTCATCTCTCGATTTTCATACAAACTGTGCAATTAGTTTTTTATTTTATCTATATTTAATGCTCCATGCATGTATCCAAAGATTCGATGTGACGTTTTTTAGAAAAAAAAATTAGGAACTTAACAAGGCCTAAATGAATATAGTGACATTGTTCACTCTGGACTACTACAGTTTTCTTAAGAAACTAGTTGGGTGCCCGTGCGTTGCAACGGCAAAAAATATATGCATTAAAGCATCTCGCCTGTTATGACTGGCAAATGAAGAGGATAGAATGTGGCTAATGTTCCTCTCTAAACAAAGGAATATGGTTAATGTATCAGAATATCAGGTATACTTGAAAAGAATTTTCTCTAACCATTAGGCATTGGCACAGAAGAATACGGTTTTATTTTCTAAGATCACAAGTTCTGAATATTACCCTCTTAGGTGATACATAGTTAGTTGATGTTTTCCTCAAAACAAAATTGGTTGGTGCTTCGGGAAGCAGTCACGGATATCACACACATGAGTAAATTTATCAAGGGTCATGCACTTGATAAATCAAAATTGTAGTGTGACCTTTCTGGGGTCTACTGATAATAATCTTCTGGTACATGCTAAATTTCAAGTTATATGCCTTGAACAGACTATATATATATATATATATATACAAAACTGAAAATCATCTTAAAGGATTACAACTGAATTTACATGGAATCCAATCCATTAAAGACATAAATGAATCTGAGTAATTCTCTGGACAGTACACTATGTGTTCATGGTAATCTTTAAAAGCTTATAGAATCCTCAATACATCGAGTTGAAATTTTGCATAGATAAATACAATTCTCAAAGAAATAGGAATAAATAATAAGAAATGTCAGTGGTAGCATATGAGGCAACTGTGGAGGCACAAATGGACGCACCAAGAAAATGTAAAAATGTGCTATCAATTGCAACTTAGTGAACAAATCTTGGAGAAGAACAATAGTTTATTAGTTCAGACAAAAATGAGAGTTTTAACTTCTATACTGAGAAATGGAATTTTATACAAAACCATATACCTTTGAAGCATGAAAAAAAGGGGTCACTCCTATGATCACCAGGAAAAAGGCAACATCAAATGAGATTGTGATTTTATAGTGATCAATAGGATTTTAGTACTTACCTGATTATTTTTGATAGTCTCTGTTCACTTGGTAAAAGAGTTCACAATTCAAATTAATCTGCTTTAGTCACTACTCATATTGGAACGCTATTCCATGTATATACCTTGAGACAAATTCCAGGCCTGATGATCGATTATGAATTGACCAACACATTTGGAATGCAGTGAAAACAGAAGAAAAATGATATCTCAGTCAATAAAAAAGCCAACGTGTGAGAATAGCCGGTAAATTAGAACTAAACTGCACATAGATATTATACTGCTCTTCCTTCCTAATATCTGACCATGTACTAATTTGGCTATTCCCAAGAATCAGATGGGAATGATTAGAACAAACCATTGTGTACAACTATGATATTAAGTATATGAACCGTTCATATCTAAACTCTGCATTGCAACAAGACTACCTGACCAAACTGATCCATGGAAGCAAATCTGAAAAATGCATCAAGCTTAACCAATGTAAACAAAGAAAAAAAATCGAATGGGATGCTCATCAGCCGGGATAACACCAGATAAAATATGACATGCTCACAGCCATCAAGAAAGAATGTTAATGGCAGCGGCATGCATGCCAGGAGATACTTAACGATCTTCTCCACCAAGAAACAGCACAACCCATGTCATAATTAACATGCAGCATGGATCTGGCTAGGCCATTGAATGAAGAGTACCCTGAGCTAAATCTTAGCAAGAAGGAAATATATTAGGTACGAATAAAGGTTTTATCCTAATAAAATTATGTTGCTAGGCTATCGAGAAAAATAAATTGTATTTACCATTAGCTTCCAGGTGTTGATAATCCATCAATATATGCATATTTCCATCCAAATAGTTCCCTTTTGAATATCTTCTGTTGTTTTTTGATATCTTCCACTAAATTGATGCAAGAGGAAATACTAATAGTGATTCTCATAGGTAAATTAAAAATATCTTATTACATTGCACTAACTTTACTTGACAACTCATATTATGTTTTTAATATGCAGAGCTACCTGACGATGACGCCGACGACACCGCCGGGGACTCGCAGCAGCGGGCGCGCGTCTCTCCACACTCCAGCGATTGTGCTGGTGGGCGCGCCTGCAACCACCGCCATCATCTCGTCCTACCCCTCAACCATACTGAGGTCCGCATTCCTATCCACCATTCCGATGGGTCCGATACAGCGGCGGCAACGGAGGGTGATGATCGAAGAGCTCGGTCCGACGATAATGATGGCTACGCAAATGATCGGGATTTGAGGGAGGTTTTGGTTTATGGAGGGGGCAGTGGCGCGATGGAGAGGGAGGGGGCGGAGCGAGGGACGGCACAATACGGAGGGAGGACAACCGGAGAAGAAGGCGTGGGTTGGGCGGGATGGGAAGGCGGCGCGTCGGTGGGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021084