BGIOSGA022929

From RiceWiki
Revision as of 16:44, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA022929

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA022929, complete gene.

LocusTag

OsI_23017

Ensembl Transcript ID

BGIOSGA022929-TA

Ensembl Protein ID

BGIOSGA022929-PA

Length

5265

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:17474645..17479909

Sequence Coding Region

17474645..17474770,17474910..17474967,17476872..17477068,17477155..17477271,17477416..17477476
,17477582..17477670,17477787..17477861,17477972..17478060,17478183..17478232
,17478337..17478377,17478506..17478679,17478984..17479112,17479529..17479909

Genome Context

<gbrowseImage1> name=IndicaChromosome06:17474645..17479909 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:17474645..17479909 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGGTGGGAGATCGGGATCGCGGGAGTTGCCGGAGACGCCGACGTGGGCGGTGGCCGTCGTCTGCGCCGTCCTCGTGCTCGTCTCCGCCGCCATGGAGCACGGCCTCCACAACCTCAGCCATTGGTTCCGTAGGCGGCAGAAGAAGGCCATGGGCGACGCCCTCGACAAGATCAAAGCAGAGCTGATGCTGCTGGGCTTCATATCCCTGCTTCTCACCGTGGCACAGGCGCCCATCTCCAAGATCTGCATCCCCAAGTCGGCTGCCAACATCTTGTTGCCGTGCAAGGCAGGCCAAGATGCCATCGAAGAAGAAGCAGCAAGTGGTCGCCGGTCCTTGGCCGGCGCCGGCGGCGGGGACTACTGCTCGAAATTCGATGGCAAGGTGGCGCTGATGTCGGCAAAGAGCATGCACCAGCTGCACATTTTCATCTTCGTGCTCGCCGTGTTCCATGTTACCTACTGCATCATCACCATGGGTTTAGGGCGCCTCAAAATGAAGAAATGGAAGAAGTGGGAGTCACAGACCAACTCATTGGAGTATCAGTTCGCAATCGATCCTTCACGATTCAGGTTCACGCATCAGACGTCGTTCGTGAAGCGGCATCTGGGATCATTCTCAAGCACCCCTGGGCTCAGATGGATCGTAGCATTCTTCAGGCAGTTCTTTGGGTCCGTCACCAAGGTGGACTACCTGACCATGCGGCAAGGCTTCATCAATGCGCATTTGTCGCAGAATAGCAAGTTCGACTTCCACAAATACATCAAGAGGTCTTTGGAGGACGACTTCAAAGTTGTCGTTGGCATCAGCCTCCCTCTGTGGTTCGTCGGAATCCTTGTACTCTTCCTCGATATCCACGGTCTTGGCACACTTATTTGGATCTCTTTTGTTCCTCTCATCATCGTCTTGTTAGTTGGGACCAAGCTAGAGATGGTGATCATGGAGATGGCCCAAGAGATACAGGACAGGGCCACTGTGATCCAGGGAGCACCTATGGTTGAACCAAGCAACAAGTACTTCTGGTTCAACCGCCCTGACTGGGTCTTGTTCTTCATACACCTGACACTCTTCCATGCAACACCTGGTCTGAAGAAATGCTTCCATGAAAATATTTGGCTGAGCATCGTGGAAGTCATTGTGGGGATCTCTCTTCAGGTGCTATGCAGCTACATCACCTTCCCGCTCTACGCGCTCGTCACACAGATGGGATCGAACATGAAGAAGACAATTTTCGAGGAGCAAACGATGAAGGCGCTGATGAACTGGAGGAAGAAGGCGATGGAGAAGAAGAAGGTCCGGGACGCCGACGCGTTCCTGGCGCAGATGAGCGTCGACTTCGCGACGCCGGCGTCGAGCCGGTCCGCGTCGCCGGTGCACCTGCTGCAGGATCACAGGGCGAGGTCGGACGACCCGCCGAGCCCAATCACGGTGGCCTCACCACCGGCACCGGAGGAGGACATGTACCCGGTGCCGGCGGCGGCTGCGTCTCGCCAGCTGCTAGACGACCCGCCGGACAGGAGGTGGATGGCATCCTCGTCGGCCGACATCGCCGATTCTGATTTTTCCTTCAGCGCACAACGGTGA</cdnaseq>

Protein Sequence

<aaseq>MAGGRSGSRELPETPTWAVAVVCAVLVLVSAAMEHGLHNLSHWFRRRQKKAMGDALDKIKAELMLLGFISLLLTVAQAPISKICIPKSAANILLPCKAGQDAIEEEAASGRRSLAGAGGGDYCSKFDGKVALMSAKSMHQLHIFIFVLAVFHVTYCIITMGLGRLKMKKWKKWESQTNSLEYQFAIDPSRFRFTHQTSFVKRHLGSFSSTPGLRWIVAFFRQFFGSVTKVDYLTMRQGFINAHLSQNSKFDFHKYIKRSLEDDFKVVVGISLPLWFVGILVLFLDIHGLGTLIWISFVPLIIVLLVGTKLEMVIMEMAQEIQDRATVIQGAPMVEPSNKYFWFNRPDWVLFFIHLTLFHATPGLKKCFHENIWLSIVEVIVGISLQVLCSYITFPLYALVTQMGSNMKKTIFEEQTMKALMNWRKKAMEKKKVRDADAFLAQMSVDFATPASSRSASPVHLLQDHRARSDDPPSPITVASPPAPEEDMYPVPAAAASRQLLDDPPDRRWMASSSADIADSDFSFSAQR</aaseq>

Gene Sequence

<dnaseqindica>1..126#266..323#2228..2424#2511..2627#2772..2832#2938..3026#3143..3217#3328..3416#3539..3588#3693..3733#3862..4035#4340..4468#4885..5265#ATGGCAGGTGGGAGATCGGGATCGCGGGAGTTGCCGGAGACGCCGACGTGGGCGGTGGCCGTCGTCTGCGCCGTCCTCGTGCTCGTCTCCGCCGCCATGGAGCACGGCCTCCACAACCTCAGCCATGTACGCGCGCGCGCACGCGGTGTGCTCATCTCTCGAGTTAATTTGGTTGTTGTTGTTGTTGTGTTCTTGTGACATCTCAATTAACATCCGATCCTGGTCGATCGATCGCCCTGTGGTGGCGCTACTGCTTGCATTGCAGTGGTTCCGTAGGCGGCAGAAGAAGGCCATGGGCGACGCCCTCGACAAGATCAAAGCAGGTCACCCTCAGCCTCAGCTCACCCTCAGCCTCCATCTCTAAATATTTGACGCCGTTGACTTTTTTAAATATGTTTGACCATTCGTCTTATTTAAAAAATTTAAGTAATTATTAATTCTTTTTCTACCATTTGATTCATTGCTAAATATACTATTATGTATACATATAGTTTTACATATTTCACTAAAGTTTTTAAATAAGACGAATGGTCAAACATGTTTAAAAAAGTCAACGGCGTCAAACATTTAGGAAGAAGAGAATATTATATTGCTGCTCCCCTCTAGCCACTTTGCTGCCTCCCTCGTCATTTTTTCAAGTATTTTACGCAAGACTGGGTCCTCCAAATCAAACGTCACAAATAAGCCATTTATAGTTTCCTTTCGCTTTTTAAGGGGGGACTACTTGTATTTAATCATGGAGGAAACTACCAGTCGGATGTCCGATTACTTAAAAAAAAATTCGGGGGACTAATTTTTTTGGCTGATCATCGGTGAAATATTAGGTTATATATGTTGAAAAAAAATCAGCCACAAACAATGAAATATTTTGTGAAACACATATTAGACACGTTGAAACGTATCATTGTTACGTATAAAACATCGAATGTTAACAGATTAAAACATATGTTTTTTTTTAATCAGAATATAATCATGCGATATATTATTGTAAAGATATAATTACAACGAATACAACAGTGCGATCGGATTATATATATATTAGTAGTTTAAGAGAAAAATCATTTTGAAGATTACTAGATACATACACGTATAGATGGATGAAGTGGAGAGAGATTAGAGATAAGTAGTTATATGAATTTTGTGAAACACACTTAAGACATATGTTCAAACATACTGCTATTATGTATGAAATATTGAGTTTTAACGGTTTAAAACACATATTCTTTTAATTAGAATGTAATAATGTGATATCTTGTTGTAAAATTTAATTACATCTAATATAACGGTGTGATTAGATTGTATGTTGGATAACATGCCCATCGGTTGGCTTATTTAGGGAATAAGCCAAATGGTATATTTGCAAACGAAAAATAATTTGTAAATAAAACTTTTATGTATGTATTCTTAACGATCTAGCAGCAAAGGCTGAAAAATAAACTTCGATGAAAAATCTCAAAATCAACTCTTAAAATTTAAATTTTGGCTTATAAGTATAGTTCCTAACTAGTTTAGAAGAAAAAATATTTAAAGCGGGGAAGAGGAAAAGGAATAAACTAATAGCTAAATTATTGCATGCATGTAGCGATTTGAGGACGACCGAGTTGTTTTGTCTGGATCAGCCGACCGAGACAGAGCAATCTTCTTTAATCATAAATAACCAGAAAAACCATACCAGTTCATCACAATGGACCGAGTCAGAGTCATTACATATTTTTCATTGTTGCGCACAGGATTCACCATGTTCTTATGGGAAATATTTTTAACTCTCAAATGGTTATGATTTTGAACTCTCATTTTTGAGAGAGAATTAACAAGCGAGCGAGCAATCAGGCCAAAAAGGGAGAAAGAAAATTATTTTTGTTAATTTTTTTTTAAGGTAGGGTGGAGGAGTCATTACATGATTTTTTTTTATATTCCCTCGTTGATTATATGCTGTTCAAATGGTTATGATTTTTTTAAAAGATAACAACAATACAAATTAGTATGTGATAGATCATTTCACGAGCATATAGGATTAAATTTAACTTCTGTAAATTACAAAACAAACAAGTTTAACTGTTAATATACATTAAATTTGTTTTTTTCAACTTAGGAATTGAATTTTATGTATATATTTGTAAAATGATATATTAATTTATTTTTTTAAAAAAATAATTATTTAGATAACACGCAAACTAGAAAACCACCGCAGAAGTTCTCATATTTCTTGTCCTATCTGCACTTGCAGAGCTGATGCTGCTGGGCTTCATATCCCTGCTTCTCACCGTGGCACAGGCGCCCATCTCCAAGATCTGCATCCCCAAGTCGGCTGCCAACATCTTGTTGCCGTGCAAGGCAGGCCAAGATGCCATCGAAGAAGAAGCAGCAAGTGGTCGCCGGTCCTTGGCCGGCGCCGGCGGCGGGGACTACTGCTCGAAATTCGATGTGAGAATAACACCAGCTGCCGGCAAGCACAACCTCGATGCAATAACTAATTTAACTATAATTGATTTTTCTTGGGTTTTCTGCAGGGCAAGGTGGCGCTGATGTCGGCAAAGAGCATGCACCAGCTGCACATTTTCATCTTCGTGCTCGCCGTGTTCCATGTTACCTACTGCATCATCACCATGGGTTTAGGGCGCCTCAAAGTGAGTTTGTCGTTCTGTCCCTCATGCACATGTTTTCTCTAGTTCTAGCAAGATTGTCAGTCCTTCAAATGGATTGTTTCGACAAGAAACCCAATTTATTAATTTGCCAGTAAATATATAATAATTGATCTTTCTTGGTTTTAGATGAAGAAATGGAAGAAGTGGGAGTCACAGACCAACTCATTGGAGTATCAGTTCGCAATCGGTAGTGAATTAAGAATCTCCCTAACTATTTCATTTCAGAACCTTTATGATAATGTCTTGAAAGAGGAGGAGCAAATCAGCTGAAAAATATGATCGATCCATGCAGATCCTTCACGATTCAGGTTCACGCATCAGACGTCGTTCGTGAAGCGGCATCTGGGATCATTCTCAAGCACCCCTGGGCTCAGATGGATCGTGAGTTATCAATCTCCGAATACATGCTTGTTTTTTATTCTTGCAACTGGCCTAGCTGTTCCAATTCAATCCATATTTTTTGAAAAAAAAAATATTCATGCCGTGTTTGTTGTTAGGTAGCATTCTTCAGGCAGTTCTTTGGGTCCGTCACCAAGGTGGACTACCTGACCATGCGGCAAGGCTTCATCAATGTATATACTAATCAAACCTGACCAATTCAACATTGATGATGCAAACAGAGACCAGGTTTTTTTTTTCGAGTGTGCATTGAGTAATGGTTTTAGCTTCTTCTCTTTTGCAGGCGCATTTGTCGCAGAATAGCAAGTTCGACTTCCACAAATACATCAAGAGGTCTTTGGAGGACGACTTCAAAGTTGTCGTTGGCATCAGGTCCGTCCTCGCTTTATTAATTATAGGACTCTTATATTCAACATTTTTTTTATAAAGAAACATATTTAGTCTCCAGTTGTGTATGTGTATGTGGATCTTGACACATTTGGCTGGTTTTGCAGCCTCCCTCTGTGGTTCGTCGGAATCCTTGTACTCTTCCTCGATATCCACGGTAATCCTTGTCCTATTTCATTCTTTTTTTTACTCTCAAAACCTTGTTCTGAATTGGTCTTATAATCACCATCGATTTTTTTTCAACTTTTTCCCCGCGTGTAGGTCTTGGCACACTTATTTGGATCTCTTTTGTTCCTCTCATCGTAAGAGCGAAATTTCCCTGTCCAAAGAAACAGTTAACATAATTAATTATGCTTTAATTTATCATGAAAATTAATATGATCATATAACTAATGAACAAACATTCATGTGAATGCCACCGTTGTCTCAGATCGTCTTGTTAGTTGGGACCAAGCTAGAGATGGTGATCATGGAGATGGCCCAAGAGATACAGGACAGGGCCACTGTGATCCAGGGAGCACCTATGGTTGAACCAAGCAACAAGTACTTCTGGTTCAACCGCCCTGACTGGGTCTTGTTCTTCATACACCTGACACTCTTCCATGTACATGTTTAAAACCTAAACCTTGCTGCTCAACTACAAATAGTACTTTATCTTTCACAATTAACACCTAATTAACTAACATAGCATCCATCCATTTGTGGCTACTGATCGATGGGACGACGGATCGATCATCACCAGAACGCATTTCAGATGGCGCATTTCGTATGGACTATGGTGTGTATGCTACTTGCTTAGTTGTTGCCATTATCAGTTCTTAAGCAAATTAAGTGTGATGCATGCACTGACTAATGAGACAAAAAATGACACAGCTTGTTCATCGATCTGGTTGTTTTGTGTGTGACAGGCAACACCTGGTCTGAAGAAATGCTTCCATGAAAATATTTGGCTGAGCATCGTGGAAGTCATTGTGGGGATCTCTCTTCAGGTGCTATGCAGCTACATCACCTTCCCGCTCTACGCGCTCGTCACACAGGTGAACAAGCCATTCACAAATTCTATTAGCCGTTTCTTAATTGATGACACTGTTAATTTTTAGACACACGTTTTGACCATTTGTCTTATTAAAAATATTTATGTAATTATCATTTGAGTTGTTTTATCACTAAAAGTACTTTTTAAATAATTTATATTTTGCATTTGTACAATTCTTTTAATAAGATAATGGTCAAACATGTGTCCAAAAGTTAACAGCATCATCTATTAAGAAAAGGAGGGGTTTTTTTTTTTTGGAATTTTGCAAAATTTGTTCAAAATCAGTCCAAAACCTTTTTTTTTTTCGAAATTTCAGTTTCACTACCAGTCCCCATAAAATGTCTTTTCTTTATTTCCACAAGATTGAACCCATGAGATGCCCTTTGTGTTGGTATGTGTTTTGGCCATCACTTGCAGATGGGATCGAACATGAAGAAGACAATTTTCGAGGAGCAAACGATGAAGGCGCTGATGAACTGGAGGAAGAAGGCGATGGAGAAGAAGAAGGTCCGGGACGCCGACGCGTTCCTGGCGCAGATGAGCGTCGACTTCGCGACGCCGGCGTCGAGCCGGTCCGCGTCGCCGGTGCACCTGCTGCAGGATCACAGGGCGAGGTCGGACGACCCGCCGAGCCCAATCACGGTGGCCTCACCACCGGCACCGGAGGAGGACATGTACCCGGTGCCGGCGGCGGCTGCGTCTCGCCAGCTGCTAGACGACCCGCCGGACAGGAGGTGGATGGCATCCTCGTCGGCCGACATCGCCGATTCTGATTTTTCCTTCAGCGCACAACGGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA022929