BGIOSGA021197

From RiceWiki
Revision as of 16:34, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA021197

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA021197, complete gene.

LocusTag

P0596H06.13

Ensembl Transcript ID

BGIOSGA021197-TA

Ensembl Protein ID

BGIOSGA021197-PA

Length

2261

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 6

Location

Chromosome 6:18554614..18556874

Sequence Coding Region

18556680..18556874,18556458..18556519,18556178..18556218,18554614..18554846

Genome Context

<gbrowseImage1> name=IndicaChromosome06:18554614..18556874 source=RiceIndica06 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome06:18554614..18556874 source=RiceIndica06 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCATCGCATGTGGACCCGCTGGTGGTGGGGAGGGTGATCGGCGACGTGGTGGACCTGTTCGTGCCGACGACGGCCATGTCGGTGCGGTTCGGGACCAAGGACCTCACCAACGGCTGCGAGATCAAGCCGTCCGTCGCCGCCGCGCCGCCCGCCGTGCAGATCGCCGGCAGGGTCAACGAGCTCTTCGCTCTGGTCATGACTGATCCAGATGCTCCTAGCCCCAGCGAGCCGACTATGAGAGAGTGGCTTCACTGGCTGGTGGTTAACATACCAGGTGGAACAGATCCTTCTCAAGGGGATGTGGTGGTGCCGTACATGGGGCCACGGCCGCCGGTGGGGATCCACCGCTACGTGATGGTGCTGTTCCAGCAGAAGGCGCGCGTGGCGGCGCCGCCGCCCGACGAGGACGCCGCGCGCGCCAGGTTCAGCACGCGCGCCTTCGCCGACCGCCACGACCTCGGCCTCCCCGTCGCCGCCCTCTACTTCAACGCCCAGAAGGAGCCCGCCAACCGCCGCCGCCGCTACTAG</cdnaseq>

Protein Sequence

<aaseq>MASHVDPLVVGRVIGDVVDLFVPTTAMSVRFGTKDLTNGCEIKPSVAAAPPAVQIAGRVNELFALVMTDPDAPSPSEPTMREWLHWLVVNIPGGTDPSQGDVVVPYMGPRPPVGIHRYVMVLFQQKARVAAPPPDEDAARARFSTRAFADRHDLGLPVAALYFNAQKEPANRRRRY</aaseq>

Gene Sequence

<dnaseqindica>1..195#356..417#657..697#2029..2261#ATGGCATCGCATGTGGACCCGCTGGTGGTGGGGAGGGTGATCGGCGACGTGGTGGACCTGTTCGTGCCGACGACGGCCATGTCGGTGCGGTTCGGGACCAAGGACCTCACCAACGGCTGCGAGATCAAGCCGTCCGTCGCCGCCGCGCCGCCCGCCGTGCAGATCGCCGGCAGGGTCAACGAGCTCTTCGCTCTGGTCAGCACACACACACACACGCACATGTGCAGCAGAATTATACTTGTGTTAATTACTAGTCCCTTTTGACATAAGCATGCTTAATTACTGCCTTGATCTGACTATTTGATCGACACATGTCGTGTTTTGTTGCGACCTGTGTGTGTTCGTGCGTGGTTAGGTCATGACTGATCCAGATGCTCCTAGCCCCAGCGAGCCGACTATGAGAGAGTGGCTTCACTGGTAATTAATTATTATTACTGTTACTGTTTTTCTTTTAGTCTTTTAATAATAAATGTGGTATATACCTATATATATATCTCCGGCGTGTGGCAACATGCACACGGCTAATTTACTGTTACTGTTATGCATGAACTCGCCATGAATTTAAATGGTGATTATTGCGCATTGTGTCTTTTTCCTTTTGAAGTTACCGTTGCGGTTTTCTTTTTTTTTTTAACTGTTCTATTGTTTTGGACCAGGCTGGTGGTTAACATACCAGGTGGAACAGATCCTTCTCAAGGTAAATAATCATGCAAGCATGCTAGTACCTTATAATTTCCTAAACAAGCTTAAGTGATATATATAGTACAGTATTACTTCCTAATTGACACTCTTTCTTCCATGCATCTTCATTTTTACTATATATAGTCAAATAATGTATTAGGGTGTGTTTAGTTCACGCTAAAACTGAAAGTTTGGTTGAAATTGGAACGATGTGATGAAAAAGTTATAAGTTTATGTATATAGGAAAGTTTTGATGTGATGGAAAAGTTGGAAGTTTGAAGAAAAAGTTTGGAACTGGCCGTGTTTAGTTCACCCCCAACTACCCCAAACTTCCAATTTTCCATCACATCACATTACATCCAAAACTTTCCTACACAAATAAACTTTCAACTTTTTTTCCGAACTTTCAACTTTCTCCAAACTTCCAATATTTTTTAGGAACTAAACACAGCCTAAACAAGGCCTTAATTCCCCACAATGCAATTAACCGAGTTGCATGCACTGATTTTGCCCTGTGCAAGGAAGGTCGCTAGCTAGCGCTAGTAGTAGCAGTAAGCAAGTAGCAACCGACCGGCTAGATTCGGTGTAGCTATGCAGAGCCTGTGTCCATTTCAGCCAGCTATAGCTGCAGGCTGCGCACAGTAGGTGCCAGCCGGCGAGCGGCCACCTGTCGGCCGCCACGAGCAACACGTGGCGGGGCTGCGGGCCCCGCCGGAGGTACACGTGTAAGCCCACCTCCGCACTCCGCGCCGCCACGTGTCGCACGCCGGACGACGACGTCGGCCGCCACCGTCGTCATCGTCATCCGGCCGGTCGTCTCACATCGCTAGCTGGATTTAATTAGTTTAATTCGTTGGATTAATTAAACAGGGAGGAGGCTAATCTAGTCTAGCTACACGGTTGTTTTGGCTCTCATCGACCCTGATCCAACGACAAAAAAGACGTCGCCTAGCTTTTTTTGAGTTCGTCCTGGTAGGGTGGGTGGTGTGACCTGCTGGCGTGATCTTTTTCATCTGGCGACTCTTGGAAGCTTTTGGCCAAGGACACGTAGTCGCTTATCCATGATGATTAATTCACACTGTACATTTGGTATCTTCGTAGTCAAGAGTAAGATTGCTAGCTAGCTAATTCAACCCAAGATCACCCGTCAAGAGTTATAGTGGAGTTGGTTCGCACGCGCACGGTTGATCTTGTAACAGCGACCGTCGTCTTATCGTTGATTAAAGCTGCATCATAATTTGATTTGATAATTAACACATGAATTATATTACTCCGTAGGCAAGCCGCAGCCAGAAGCTGTTTAATTACTGATTTTGATGTGTTCGTTTAATTTGCGGATCGATGCAGGGGATGTGGTGGTGCCGTACATGGGGCCACGGCCGCCGGTGGGGATCCACCGCTACGTGATGGTGCTGTTCCAGCAGAAGGCGCGCGTGGCGGCGCCGCCGCCCGACGAGGACGCCGCGCGCGCCAGGTTCAGCACGCGCGCCTTCGCCGACCGCCACGACCTCGGCCTCCCCGTCGCCGCCCTCTACTTCAACGCCCAGAAGGAGCCCGCCAACCGCCGCCGCCGCTACTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA021197