BGIOSGA029865

From RiceWiki
Revision as of 17:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA029865

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA029865, complete gene.

LocusTag

OsI_31156

Ensembl Transcript ID

BGIOSGA029865-TA

Ensembl Protein ID

BGIOSGA029865-PA

Length

4242

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:11131299..11135540

Sequence Coding Region

11135175..11135540,11134662..11134890,11134295..11134543,11134135..11134185,11133737..11133997
,11133258..11133310,11133021..11133135,11132668..11132922,11131299..11132344

Genome Context

<gbrowseImage1> name=IndicaChromosome09:11131299..11135540 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:11131299..11135540 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGACGACGACGGCGGGATCCAGGAGGAGCCTGCACCGCCCCCGCCACCCCCGCCTCCCCCGCCGCCGCTGCGGAGGCTCCTGACGGCGACGCGGTCGGGTGGCTCGAGGTGGGTGGACGGCAGCGAGGTCGGCTCGTCCGAGTCCGCGCCGTGGTCGCTCGACGGCGACCGCTCCCTCCGCCTCTCCGTCGACTCCGCCGCCTCCGCCGGTGGCGCCAGCGGAGGCGGAGGCGGAGGCGGGCCGCTCTCGCGTGCGTCCTCCGGCGCGTTCCGGCGGCGCTTCGGGAAGCAGCCGAGGCGGGTCGACTCCCTCGACGTCGAGGCCATGTCCGTCCGCGGCGCGCACGGCCACAGCAGCAAGGAGATATCAATGCTGAGCACCGTGGCGATGGCGTTCCAGACCCTCGGAGTCGTCTACGGCGACATGGGCACGAGCCCTCTCTATGTCTTCAGCGATGTGTTCAGCAAGGTGCCCATAAAGTCCGAGGTCGAGATTCTTGGAGCGCTTTCTCTGGTCATGTACACCATCGCGTTGATCCCTTTCGCAAAGTATGTCTTTATAGTTCTGAAAGCTAATGACAATGGAGAAGGAGGCACTTTCGCGCTGTACTCGCTGATCTGCAGGTATGCAAAAGTTAGTCTGCTTCCAAATCAGCAACGTGTGGATGAGGATATTTCTAGCTTTAGGCTTAAGTTGCCTACCCCTGAGCTTGAGCGAGCTCTATCTGTCAAAGAATCCCTTGAAAAGAATCCAGTCTTCAAAAACATTCTTTTGTTCTTGGTTCTGATGGGAACTTCTATGGTAATCGGGGATGGCATTCTCACTCCATCGATGTCAGTTATGTCTGCTGTCAGTGGTCTGCAAGGTCGAGTTCCTGGATTTGGGACAGATGCTGTTGTAATCGTTTCGATCCTGTTTCTTATACTATTGTTCAGCGTACAGAGGTTTGGAACTGGGAAAGTTGGTTTCATGTTTGCTCCTATTTTGGCTCTGTGGTTTATTAATTTGGGAACCATTGGAATTTACAACTTGGCTAAATATGATATATCTGTTGTGAGAGCATTCAATCCAGTGTATATCTATTTATTTTTCCAGACGAATGGTATAAAGGCATGGTCAGCTCTTGGTGGTTGTGTCTTGTGCATCACAGGAGCTGAAGCAATGTTTGCAGATCTGGGGCATTTCTCTGTGAAATCAATACAGGTAGCATTCACAGCTGTGGTATTCCCTTGTTTGCTTATCGCTTACATGGGCCAAGCTGCATATTTGATGAAATATCCATTTGCTGTAGAAAGAATATTTTATGATTCTGTACCAGAAATTCTTTTCTGGCCAGTATTTGTGATTGCTACACTTGCTGCTATGATTGCCAGCCAAGCTATGATATCAGCAACTTTCTCTTGCATAAAGCAGGCCATGGCTCTTGGTTGCTTTCCTAGAATTAAAATAATTCATACATCCAAGAAAGTCATGGGCCAGATTTACATTCCTGTTATGAATTGGTTTCTCATGGTCATGTGCATCATCATTGTTGCCACTTTCAGGAGTACCAACGACATTGCCAATGCTTACGGTATTGCTGAAGTTGGAGTTATGATGGTTAGCACTGCACTGGTTACGTTGGTGATGCTTCTTATATGGCAAACCAATTTGTTCCTCGTTATGTGCTTCCCTGTTATTTTTGGTTCTGTGGAGTTTGTTTACTTAACAGCCGTTCTGTCAAAGATACAAGAAGGAGGATGGTTACCTCTGGCTTTCTCATCATTGTTCCTCTGCATAATGTACACATGGAACTACGGAAGTGTGTTGAAGTACCAGAGCGAGATGCGTGGGAAGATTTCCCTGGACTTTATCCTTGACCTGGGATCCACGCTTGGCACAGTAAGAGTTCCAGGGATTGGTCTTGTGTACAATGAGCTGGTCCAGGGAATTCCGTCGATCTTTGGCCATCTTTTGGTCACACTCCCAGCAATGCACTCTACGATTGTCTTCGTTTGCATAAAGTATGTTCCTGTCCCATATGTCCCATTTGAAGAAAGGTTCTTGTTCCGAAGGATTGGCCAAAAGGACTACCATATGTTCCGTTGTGTTGCACGGTATGGTTACAAGGATGTCAGGAAAGAGGAACATGGCTTCTTTGAGCAGCTTTTGGTTGAAACCCTGGAGAAATTTTTGAGGAAGGAATCCCAGGAAATGGCACTTGAAGCAAGCGCAATGGCAGTAGAGCGTGACGATGTTTCTGTTGTATCTGATATCCCTTCATCTCCTGTTGAGGCTGGGGATCTACATGTTCCACTGCTTTCTGATCAGAGGCTGGGTGATGGCACCCAAACATTCATCACCGAAGGCAATACACCTGTGCTTCCCACGAGTTCCATCTCAGAAGAAGACCCCAGCTTGGAGTATGAGCTGGAGTCACTGAGAGAAGCCATAGCTTCTGGATTCACATACCTCTTGGCACACGGTGACGTGAGGGCGAGGAAGGAATCGTTCTTCACGAAGAAGTTCATCATCAATTACTTCTACGCGTTCCTCAGGAGGAATTGCAGGGCTGGAACCGCAACCTTGAAGGTCCCTCACTCGAACATTATGCGTGTCGGGATGACATACATGGTGTGA</cdnaseq>

Protein Sequence

<aaseq>MDDDDGGIQEEPAPPPPPPPPPPPLRRLLTATRSGGSRWVDGSEVGSSESAPWSLDGDRSLRLSVDSAASAGGASGGGGGGGPLSRASSGAFRRRFGKQPRRVDSLDVEAMSVRGAHGHSSKEISMLSTVAMAFQTLGVVYGDMGTSPLYVFSDVFSKVPIKSEVEILGALSLVMYTIALIPFAKYVFIVLKANDNGEGGTFALYSLICRYAKVSLLPNQQRVDEDISSFRLKLPTPELERALSVKESLEKNPVFKNILLFLVLMGTSMVIGDGILTPSMSVMSAVSGLQGRVPGFGTDAVVIVSILFLILLFSVQRFGTGKVGFMFAPILALWFINLGTIGIYNLAKYDISVVRAFNPVYIYLFFQTNGIKAWSALGGCVLCITGAEAMFADLGHFSVKSIQVAFTAVVFPCLLIAYMGQAAYLMKYPFAVERIFYDSVPEILFWPVFVIATLAAMIASQAMISATFSCIKQAMALGCFPRIKIIHTSKKVMGQIYIPVMNWFLMVMCIIIVATFRSTNDIANAYGIAEVGVMMVSTALVTLVMLLIWQTNLFLVMCFPVIFGSVEFVYLTAVLSKIQEGGWLPLAFSSLFLCIMYTWNYGSVLKYQSEMRGKISLDFILDLGSTLGTVRVPGIGLVYNELVQGIPSIFGHLLVTLPAMHSTIVFVCIKYVPVPYVPFEERFLFRRIGQKDYHMFRCVARYGYKDVRKEEHGFFEQLLVETLEKFLRKESQEMALEASAMAVERDDVSVVSDIPSSPVEAGDLHVPLLSDQRLGDGTQTFITEGNTPVLPTSSISEEDPSLEYELESLREAIASGFTYLLAHGDVRARKESFFTKKFIINYFYAFLRRNCRAGTATLKVPHSNIMRVGMTYMV</aaseq>

Gene Sequence

<dnaseqindica>1..366#651..879#998..1246#1356..1406#1544..1804#2231..2283#2406..2520#2619..2873#3197..4242#ATGGACGACGACGACGGCGGGATCCAGGAGGAGCCTGCACCGCCCCCGCCACCCCCGCCTCCCCCGCCGCCGCTGCGGAGGCTCCTGACGGCGACGCGGTCGGGTGGCTCGAGGTGGGTGGACGGCAGCGAGGTCGGCTCGTCCGAGTCCGCGCCGTGGTCGCTCGACGGCGACCGCTCCCTCCGCCTCTCCGTCGACTCCGCCGCCTCCGCCGGTGGCGCCAGCGGAGGCGGAGGCGGAGGCGGGCCGCTCTCGCGTGCGTCCTCCGGCGCGTTCCGGCGGCGCTTCGGGAAGCAGCCGAGGCGGGTCGACTCCCTCGACGTCGAGGCCATGTCCGTCCGCGGCGCGCACGGCCACAGCAGCAAGGTGAATCCCTGGAGGAACCTTGGGGGGGATCATTTCACTGTTGGTGAATACCTTTTCGCAGAGTGATTATATTGACCATTTCTTGATTAGATAGGGAGGATCACGCCTGATGGGATTGATCACCGAATGTTTATTTTGATTAGTAAATGTTTTGATTTCGTTTGGAATCTGGGAAACATTTTGCTATATCTGAATGGTAGTATTGCAAGGATCAATGGGACCTCTGAACCTGATGATGTGATTGACTCACTCCTCTTGATTGGCTGCTGCAACCTGAACCACAGGAGATATCAATGCTGAGCACCGTGGCGATGGCGTTCCAGACCCTCGGAGTCGTCTACGGCGACATGGGCACGAGCCCTCTCTATGTCTTCAGCGATGTGTTCAGCAAGGTGCCCATAAAGTCCGAGGTCGAGATTCTTGGAGCGCTTTCTCTGGTCATGTACACCATCGCGTTGATCCCTTTCGCAAAGTATGTCTTTATAGTTCTGAAAGCTAATGACAATGGAGAAGGTATAGCTCTGTGCCATTTTGACATCAGATATGTAGAGCCAATCATGTGAACTGCCTGTCGGTTTGATGTTCTCTGAATTTGTTGGCTTACTGATTGTGTTGTTACATGATTTTTCAGGAGGCACTTTCGCGCTGTACTCGCTGATCTGCAGGTATGCAAAAGTTAGTCTGCTTCCAAATCAGCAACGTGTGGATGAGGATATTTCTAGCTTTAGGCTTAAGTTGCCTACCCCTGAGCTTGAGCGAGCTCTATCTGTCAAAGAATCCCTTGAAAAGAATCCAGTCTTCAAAAACATTCTTTTGTTCTTGGTTCTGATGGGAACTTCTATGGTAATCGGGGATGGCATTCTCACTCCATCGATGTCAGGTGCTCCACGAACAAAAATGTTTCCTGACTGTAGTAACAGAGATTCTGCTATCTCCACCCACATTTTTCTTAATTGTTGATCCAACCATTCTTTTTTACTTTTGTTCAGTTATGTCTGCTGTCAGTGGTCTGCAAGGTCGAGTTCCTGGATTTGGGACAGGTTTGATGTTCTGTATGCCTTGCTAAATATCACCGATTGAAATTTGCTTATATGATACATCATTAACTCATTACGGAAGCATTTAACTGATGTTTTATATACTTTCTGAGGTTACAAGACGTGTTTTTTCTATGCAGATGCTGTTGTAATCGTTTCGATCCTGTTTCTTATACTATTGTTCAGCGTACAGAGGTTTGGAACTGGGAAAGTTGGTTTCATGTTTGCTCCTATTTTGGCTCTGTGGTTTATTAATTTGGGAACCATTGGAATTTACAACTTGGCTAAATATGATATATCTGTTGTGAGAGCATTCAATCCAGTGTATATCTATTTATTTTTCCAGACGAATGGTATAAAGGCATGGTCAGCTCTTGGTGGTTGTGTCTTGTGCATCACAGGTAAATCCTTACTCAAGCAGCAATATTATCAGTTTAGGTTGTCTTTTCATGTTTAATGACAAAAGTGACAACTGCCAAATTTTACATCCACACTAATTGTTGTCCTCAAGAGTCAGTAGTTTACAACTCAGATACTTAGTAGTACCAAGACTCTACAAAGGAGTATCATGATGGATGAAAATATCCCTTCTGAATTAATGTGCAGCTATCTCTGTTTATGATTTGATTTTGGATGAATGCATCCTGAACCATATTTCCTGTCACTCATTCAATATTTCTGAATCGATCCTGCCAGTTATGTGTAATTACTCCAAAAGTCTGAAATACCATTTTTCTTGAGTGAATCATTGAACACTAACACTGAGTGATTGTGCTGCATTCCAGAAATATTTTATTGCACTCATTTGCCTTTTTTTTTAATTGTAGGAGCTGAAGCAATGTTTGCAGATCTGGGGCATTTCTCTGTGAAATCAATACAGGTTAACATATTAACAAGATCAACAATTGAGTCATTTTTTTCTGATACTCTGTGTGTTTTGTGTGATACTTGCCAATCTTTTTTAATCAAGACATAAATTTTGTTATCTTTTGCTTGTTCTAGGTAGCATTCACAGCTGTGGTATTCCCTTGTTTGCTTATCGCTTACATGGGCCAAGCTGCATATTTGATGAAATATCCATTTGCTGTAGAAAGAATATTTTATGATTCTGTACCAGGTAAAAATTCCATCTGGGCTGGTCATTGTTATTATCACTCTTAACAATTGTCTTTTCCTGTTCCATTGTGTAACTCAAGTTTTCTGTCTGCAATGCAGAAATTCTTTTCTGGCCAGTATTTGTGATTGCTACACTTGCTGCTATGATTGCCAGCCAAGCTATGATATCAGCAACTTTCTCTTGCATAAAGCAGGCCATGGCTCTTGGTTGCTTTCCTAGAATTAAAATAATTCATACATCCAAGAAAGTCATGGGCCAGATTTACATTCCTGTTATGAATTGGTTTCTCATGGTCATGTGCATCATCATTGTTGCCACTTTCAGGAGTACCAACGACATTGCCAATGCTTACGGTCAGTAATTTGGTCTCAGGGGATTATTCAATACATATATTTTTTTAATTGAATGCAGTTTATCATAAGCAGTCATCTTGGCAAATGATCCCTCCCAAATTTTCCACCCTCAAACTTGCTATATTATAACATCCATAATCAATTTATAAAAACTACTGTTGCAATTGTGACCAACCTTTGGAAATGGTTACAATGCACTGATGAACAACTTCCATTCCGTTCTGCAATGTCAAATACTTGTAGTGTGTTGCAATGCTAGCATCTATTATTTTCCTCGGCAACTGTCTCATTATTGCTGATACTGATTTTCAAAATATTTTCAGGTATTGCTGAAGTTGGAGTTATGATGGTTAGCACTGCACTGGTTACGTTGGTGATGCTTCTTATATGGCAAACCAATTTGTTCCTCGTTATGTGCTTCCCTGTTATTTTTGGTTCTGTGGAGTTTGTTTACTTAACAGCCGTTCTGTCAAAGATACAAGAAGGAGGATGGTTACCTCTGGCTTTCTCATCATTGTTCCTCTGCATAATGTACACATGGAACTACGGAAGTGTGTTGAAGTACCAGAGCGAGATGCGTGGGAAGATTTCCCTGGACTTTATCCTTGACCTGGGATCCACGCTTGGCACAGTAAGAGTTCCAGGGATTGGTCTTGTGTACAATGAGCTGGTCCAGGGAATTCCGTCGATCTTTGGCCATCTTTTGGTCACACTCCCAGCAATGCACTCTACGATTGTCTTCGTTTGCATAAAGTATGTTCCTGTCCCATATGTCCCATTTGAAGAAAGGTTCTTGTTCCGAAGGATTGGCCAAAAGGACTACCATATGTTCCGTTGTGTTGCACGGTATGGTTACAAGGATGTCAGGAAAGAGGAACATGGCTTCTTTGAGCAGCTTTTGGTTGAAACCCTGGAGAAATTTTTGAGGAAGGAATCCCAGGAAATGGCACTTGAAGCAAGCGCAATGGCAGTAGAGCGTGACGATGTTTCTGTTGTATCTGATATCCCTTCATCTCCTGTTGAGGCTGGGGATCTACATGTTCCACTGCTTTCTGATCAGAGGCTGGGTGATGGCACCCAAACATTCATCACCGAAGGCAATACACCTGTGCTTCCCACGAGTTCCATCTCAGAAGAAGACCCCAGCTTGGAGTATGAGCTGGAGTCACTGAGAGAAGCCATAGCTTCTGGATTCACATACCTCTTGGCACACGGTGACGTGAGGGCGAGGAAGGAATCGTTCTTCACGAAGAAGTTCATCATCAATTACTTCTACGCGTTCCTCAGGAGGAATTGCAGGGCTGGAACCGCAACCTTGAAGGTCCCTCACTCGAACATTATGCGTGTCGGGATGACATACATGGTGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA029865