BGIOSGA031112

From RiceWiki
Revision as of 17:26, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA031112

Description

cDNA clone:002-111-E01, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA031112, complete gene.

LocusTag

OSJNOA273B05.4-2

Ensembl Transcript ID

BGIOSGA031112-TA

Ensembl Protein ID

BGIOSGA031112-PA

Length

1632

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:19152478..19154109

Sequence Coding Region

19152478..19153600,19153706..19154109

Genome Context

<gbrowseImage1> name=IndicaChromosome09:19152478..19154109 source=RiceIndica09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome09:19152478..19154109 source=RiceIndica09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATCGTAGACCGCAAGGGGGGTGGCAGCCGGTGAAGCGGCGATTTGGGGAAGAGGGGAGGGGATTTCGTGACCTCACCGAAGGGGAGTTGAGGGAGAGATTGCAGAGGGAAAGGGCGGGAGAAGGGGAGAGAGAGGGAAGCAGGGAGCGAGGTGGTGAACAGCGCGGACCTCGGTGTTTTGGATCACCGGTGGGACGCCGGGAGGGGGGCAGGGGAGCTGGTCGCGGCGACGAGAACTGGCAAGGAGGTCGTCCAGATGTGGCGCGGCAGGGCGGCGGTGGAGATGGTAGCTGGCATGGGGGAAGAGGGGATGGGGGCAGACTTGGAGGAGGAAGAGCAGAAGTTATCAAATTCTTCAAGTGTGCTCAAGAGGGACACCTTCAAATCGACTGCCCGAACCCTCCAATCTGCTATACATGTAAGAAATCTGGTCATATTGCTGCAGAATGTTCAAATTTCCATCGCAAAGGGATTCATCTATGCGGATATGGGATTGCTGGCCAGTGCTTTAATAGCATGACGATTGAGACTGATGGGGGAGAAGATGATCAGATTCCTATCAGGGGGATATTGACTGTAATTAGTGGGGAAGGTTCTGTGGATCAGATAGAATGGAAGCTGAAGTACAAATTGTTTAAGGGAGTTGTGTGGGACTGGAAGGTGACTGCAATCAGTGAGAAAACTTTCCTGATATCTTTCCCTTCAAAGGAGGCTAGGAGAGAGCTGACAAAATTTGATGGTTTTGATTTAAGTTCCTCTATCAAAGCTAAGGTGGAGGAGACCAGCAGGACAGAGGAATCTTTTGCTGAGCTAAGAGAAGTTTGGGTCAAAGCTTATAGGGTGCCTAGAATTGCTAGAAAGGAGAAGGAGTTGAAAGATCTATCATATTTGGTTGGGGAGCCAATTGAGGTTGATGAGACAAGTTTGAGAGGTTTGGGACCGGTTAGGGTCAAGGTGGCAGTATGTTCACCGGAGGAAATTCAGGGAAGCACCTCTGTGTTCATAAACAGGGTGGGATATAGAATCAGATGGGAGACTGAAGAAGGAAACATGGAGCAACTGAATCCTTCTCCAAAGAAGAAAAAAGAGGAAAAACAAAAGGATGTTGACAAGGATAAAGGGTCAAAACAACAGCAGTTGCTGGCCCTGACAATGAACCAAGTTTCAGAGAAGAATGGGGATTATAAGAATCCTGAGACAATACTAAAATCTGGAAGAGATGCAGGCAAGGAGATGGTAGTATGGGAGTCACAAATGGAGCAAAAGGTAAACACAAAAGGAGTGCCAGCTGATCAGTCTCTAGATATGCTCACTCAGATGGATGTGGAAAAAATTGACAGTCTGTCTCAGAATCTGAATGACTCCTATGAGGCTGAAGATGAAGTGGACTATGACTACTCTGATTTAGAGGTGCAGGAGGGGATGATCTCAACTCAGAAACTGGAAGCTTACTTTGAAGAAGAAGGCAAAGAGAAAGATAAGCCAAACAGGGGAGAAATCTGCTTGGGGAAGAGGATAACATGA</cdnaseq>

Protein Sequence

<aaseq>MDRRPQGGWQPVKRRFGEEGRGFRDLTEGELRERLQRERAGEGEREGSRERGGEQRGPRCFGSPVGRREGGRGAGRGDENWQGGRPDVARQGGGGDGSWHGGRGDGGRLGGGRAEVIKFFKCAQEGHLQIDCPNPPICYTCKKSGHIAAECSNFHRKGIHLCGYGIAGQCFNSMTIETDGGEDDQIPIRGILTVISGEGSVDQIEWKLKYKLFKGVVWDWKVTAISEKTFLISFPSKEARRELTKFDGFDLSSSIKAKVEETSRTEESFAELREVWVKAYRVPRIARKEKELKDLSYLVGEPIEVDETSLRGLGPVRVKVAVCSPEEIQGSTSVFINRVGYRIRWETEEGNMEQLNPSPKKKKEEKQKDVDKDKGSKQQQLLALTMNQVSEKNGDYKNPETILKSGRDAGKEMVVWESQMEQKVNTKGVPADQSLDMLTQMDVEKIDSLSQNLNDSYEAEDEVDYDYSDLEVQEGMISTQKLEAYFEEEGKEKDKPNRGEICLGKRIT</aaseq>

Gene Sequence

<dnaseqindica>1..1123#1229..1632#ATGGATCGTAGACCGCAAGGGGGGTGGCAGCCGGTGAAGCGGCGATTTGGGGAAGAGGGGAGGGGATTTCGTGACCTCACCGAAGGGGAGTTGAGGGAGAGATTGCAGAGGGAAAGGGCGGGAGAAGGGGAGAGAGAGGGAAGCAGGGAGCGAGGTGGTGAACAGCGCGGACCTCGGTGTTTTGGATCACCGGTGGGACGCCGGGAGGGGGGCAGGGGAGCTGGTCGCGGCGACGAGAACTGGCAAGGAGGTCGTCCAGATGTGGCGCGGCAGGGCGGCGGTGGAGATGGTAGCTGGCATGGGGGAAGAGGGGATGGGGGCAGACTTGGAGGAGGAAGAGCAGAAGTTATCAAATTCTTCAAGTGTGCTCAAGAGGGACACCTTCAAATCGACTGCCCGAACCCTCCAATCTGCTATACATGTAAGAAATCTGGTCATATTGCTGCAGAATGTTCAAATTTCCATCGCAAAGGGATTCATCTATGCGGATATGGGATTGCTGGCCAGTGCTTTAATAGCATGACGATTGAGACTGATGGGGGAGAAGATGATCAGATTCCTATCAGGGGGATATTGACTGTAATTAGTGGGGAAGGTTCTGTGGATCAGATAGAATGGAAGCTGAAGTACAAATTGTTTAAGGGAGTTGTGTGGGACTGGAAGGTGACTGCAATCAGTGAGAAAACTTTCCTGATATCTTTCCCTTCAAAGGAGGCTAGGAGAGAGCTGACAAAATTTGATGGTTTTGATTTAAGTTCCTCTATCAAAGCTAAGGTGGAGGAGACCAGCAGGACAGAGGAATCTTTTGCTGAGCTAAGAGAAGTTTGGGTCAAAGCTTATAGGGTGCCTAGAATTGCTAGAAAGGAGAAGGAGTTGAAAGATCTATCATATTTGGTTGGGGAGCCAATTGAGGTTGATGAGACAAGTTTGAGAGGTTTGGGACCGGTTAGGGTCAAGGTGGCAGTATGTTCACCGGAGGAAATTCAGGGAAGCACCTCTGTGTTCATAAACAGGGTGGGATATAGAATCAGATGGGAGACTGAAGAAGGAAACATGGAGCAACTGAATCCTTCTCCAAAGAAGAAAAAAGAGGAAAAACAAAAGGATGTTGACAAGGATAAAGGTGATGACAAGGGTCCCTCCAAAAAAAAGGGAGAGTCATCGAAGGATGGAGAAGCAAAAGGGAGCAGAGGGCCTTAACCTCATTCAGCTCCACCAAAACTGCCAGGGTCAAAACAACAGCAGTTGCTGGCCCTGACAATGAACCAAGTTTCAGAGAAGAATGGGGATTATAAGAATCCTGAGACAATACTAAAATCTGGAAGAGATGCAGGCAAGGAGATGGTAGTATGGGAGTCACAAATGGAGCAAAAGGTAAACACAAAAGGAGTGCCAGCTGATCAGTCTCTAGATATGCTCACTCAGATGGATGTGGAAAAAATTGACAGTCTGTCTCAGAATCTGAATGACTCCTATGAGGCTGAAGATGAAGTGGACTATGACTACTCTGATTTAGAGGTGCAGGAGGGGATGATCTCAACTCAGAAACTGGAAGCTTACTTTGAAGAAGAAGGCAAAGAGAAAGATAAGCCAAACAGGGGAGAAATCTGCTTGGGGAAGAGGATAACATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA031112