BGIOSGA024235
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA024235 |
|---|---|
| Description |
Autophagy-related protein 8 |
| Definition |
Oryza sativa Indica Group BGIOSGA024235, complete gene. |
| LocusTag |
XD2 |
| Ensembl Transcript ID |
BGIOSGA024235-TA |
| Ensembl Protein ID |
BGIOSGA024235-PA |
| Length |
1889 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 7:17781647..17783535 |
| Sequence Coding Region |
17783499..17783535,17782488..17782543,17782346..17782398,17781827..17781945,17781647..17781741 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome07:17781647..17783535 source=RiceIndica07 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome07:17781647..17783535 source=RiceIndica07 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAATTCCGGTGATCGTTGAGAAGGCTGACAAGACCGATGTTCCAGAAATTGACAAAAAGAAGTACCTTGTCCCTGCTGATCTCACTGTTGGCCAGTTTGTCTATGTGGTTCGGAAGAGGATTAAGCTTAGCCCAGAAAAGGCCATCTTTGTCTTTGTGAAGAACACATTGCCGCCAACTGCTTCTTTGATGTCTGCAATCTACGAAGAGAACAAGGATGAGGACGGCTTCCTCTACATGACTTACAGTGGCGAGAACACATTCGGCTCTGCGTAA</cdnaseq> |
| Protein Sequence |
<aaseq>MARTSFKLEHPLERRQAESARIREKYSDRIPVIVEKADKTDVPEIDKKKYLVPADLTVGQFVYVVRKRIKLSPEKAIFVFVKNTLPPTASLMSAIYEENKDEDGFLYMTYSGENTFGSA</aaseq> |
| Gene Sequence |
<dnaseqindica>1..37#993..1048#1138..1190#1591..1709#1795..1889#ATGGCCAGGACTTCCTTCAAGCTCGAGCACCCACTGGGTTTGTTGCTTCTTCTCTCTCGCCCCATTACCTCTTTGCCCTGTCAATTTGTTGCGATTAGGTTGCAATCTGTGATTCGATCGATGGTGTGGTGGTAGATTGATTGCGAGTTTGTAGATGGGCGTTTTATAATCGGAACTAGCTTTACGTTTTTGTGTGGTATATGATGATCTGATTGTAGATTATATATGAGTACTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGATTTTTCTTTTGGTTGCGTGTGTTGCATATTGGTCTTGAGCTGTGTATTAGTTGCAGAAGAGGACTCTGTAGTTTACGGTCGCTTGTTTCCAGAACAAAAGTTTAAACTCTGGGATACTTGTTTTATTCCCAGTTGCAAAAGGGTTTTTCATCATATTCGGACTAACACAATGCTTATTGTATAGATTTTTGTCGGTAGTTCTATTACTCGTAACACAATGCTTATTCTTCGGTAGTTCCATTACTCGTGGCAGATAACATCAAATGTCCAATTAAGCAAACATATTTGTTCTTGTTGATCTAGTCTGTTTTATGATTGAATTGTGTTCAATGCGCATTGTTGTTTCAATAATAAACTGTTTCATGTATTGAACTTGTTTACTTCAGTCTTCAATATATCATGATTCTCTTGATTAGCAGTACCCTGTTTACTGGTGGTTGGAACATGCTGTACTTTGTATTTATTTGATTGAGCCTTGAACATATTTGCTAATCTAAGAAAAGCTAGCTTGTACAAGAGGTTGAGATGATATTTTTTCTTCTATTTATCTGCTTTACACTTAGCACAGATTACCCCTAATTCCATTAGTGTAGCAGAACCAACTGTGAAAAGAAAAAAAAAAACATTCCCGACTATGTTTATGTCAACCACATGTAATTTGCATATAGCATCTTATGATGTTTGTATTTTGAATGATATTGCAGAAAGGAGGCAAGCAGAATCTGCCAGGATCCGTGAGAAGTACTCAGACAGAATTCCGGTAATATATCTCTGCTGTTTACTTTTTCGTTTGTGCATATCTCCTATATGCATCTGTCTTATCTAAAATTCTGCGATATGCTATTTCAGGTGATCGTTGAGAAGGCTGACAAGACCGATGTTCCAGAAATTGACAAAAAGAAGTAAGCTTTCTTTTCCACATCTCCTTTATTATGACGGGAGATGTTCTATCTCATGGTTGCTTATATCAGCTACTAAAGCTTTTTTTTTATGTATGAGAGGGCTTCCATTTTTCCTCTCCTTTTTAACACCTGCTTTAGTTGGAGGAAGATAAAATAGGAGCAACTTTTCTTTCACATTAGGTTCTATCTAACTCAATCAGGCCTAATTTCGCTTTAGATGTCCTGTATTCTCTGGAATTTGGCTTGCTATGTTCTATTTGTTTGGTTAGTACTTAGTACTCTTTATTTATGTTGCTTATTGACTTAGAATACCCAGGCATCTGCTATTAATTGAATTGAAATCCTGAAATATTAACCTTCTCTTGGATACACACATCTTTGTTTTTTTTTTCTGATGTAGGTACCTTGTCCCTGCTGATCTCACTGTTGGCCAGTTTGTCTATGTGGTTCGGAAGAGGATTAAGCTTAGCCCAGAAAAGGCCATCTTTGTCTTTGTGAAGAACACATTGCCGCCAACTGGTAAATTCATTGTTCTTGATTTGTCATTGTCATATCACCTACCCTTTTGGTTTCCTTATATTTTGCGCATACATTCTATTGGCAGCTTCTTTGATGTCTGCAATCTACGAAGAGAACAAGGATGAGGACGGCTTCCTCTACATGACTTACAGTGGCGAGAACACATTCGGCTCTGCGTAA</dnaseqindica> |
| External Link(s) |
