BGIOSGA024128

From RiceWiki
Revision as of 16:50, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA024128

Description

cDNA, clone: J075093E01, full insert sequence

Definition

Oryza sativa Indica Group BGIOSGA024128, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA024128-TA

Ensembl Protein ID

BGIOSGA024128-PA

Length

4897

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19858150..19863046

Sequence Coding Region

19862884..19863046,19861576..19861762,19860911..19861078,19860510..19860545,19859011..19859088
,19858905..19858936,19858752..19858812,19858586..19858663,19858150..19858225

Genome Context

<gbrowseImage1> name=IndicaChromosome07:19858150..19863046 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:19858150..19863046 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTGACCGACGCCGCCGCGATGGCCGTCGTGAAGGCGGCGCGCCCGGCCTTCCGCGGCGCCCACGACGGGGTCGCCTTCGCCGCCAACGCCGCGTTCCTCGCCGCCGGCTACTCCCTCTGCGCCGTCGGCCCCGCCGCGCTCACCGACCCCCCGCCCTCAGGTGAAGAGGAGGTGGGGATTGATGGTTGGAACAGCATGGATAATTGTTATGCATTTTTGTACATCAAGGAGGAGAGGGGCAAGAAGAAACGGGTATTGGTAAAATGTCTGGTGATCGGTGATGTCCTTGCCATTGATGTCCTGGATCTTGAGGCACAGAATAAAGGCCCTTATAATATCCAGATCAATGTGAAGGATTTCTTCTCCGAGGAGCAGCCAAAGAACTACGGGAACATGTACAAAAACTTTGCAGGCTTAATTGAGACCATGAACTCAAATGCATTGAGCAAATTGGATGAGAAGGATGCTGGTGCTGCCAAGAACCCTGAGGTTGAGACTAGCTCATCAATACACAGATCTGAAAATCCAGGCCTGAGAACTACTGAACCTGGCTTGGTTTATCCTCCAATAGCTCCACTTGGTCATGATGATGCCTTCCCTGGCCCTGGCGCAGGCTTCTATCCTCATAGTGGTATTGGTGGGGGTGGCAGCATGCATGTTGGTCCAAACGATCCACGCTTCTTTCCTTCTAATCCCTTCCCTGTGCCCTTTGGTGGCCCTGGGAGTGTTCCACCGGGTGGTCGTTATGATCCAATTGGTCCACCAGATGTTCCAGGATTTGAACCTTCTCGCTTTGTGAGGCGTCCGAGGCCTCCAGCTGGGACTACTCACCCAGACCTTGAGTTCTTCCAGCCGGGGCCGCAGGGGCCCTTCTGA</cdnaseq>

Protein Sequence

<aaseq>MVTDAAAMAVVKAARPAFRGAHDGVAFAANAAFLAAGYSLCAVGPAALTDPPPSGEEEVGIDGWNSMDNCYAFLYIKEERGKKKRVLVKCLVIGDVLAIDVLDLEAQNKGPYNIQINVKDFFSEEQPKNYGNMYKNFAGLIETMNSNALSKLDEKDAGAAKNPEVETSSSIHRSENPGLRTTEPGLVYPPIAPLGHDDAFPGPGAGFYPHSGIGGGGSMHVGPNDPRFFPSNPFPVPFGGPGSVPPGGRYDPIGPPDVPGFEPSRFVRRPRPPAGTTHPDLEFFQPGPQGPF</aaseq>

Gene Sequence

<dnaseqindica>1..163#1285..1471#1969..2136#2502..2537#3959..4036#4111..4142#4235..4295#4384..4461#4822..4897#ATGGTGACCGACGCCGCCGCGATGGCCGTCGTGAAGGCGGCGCGCCCGGCCTTCCGCGGCGCCCACGACGGGGTCGCCTTCGCCGCCAACGCCGCGTTCCTCGCCGCCGGCTACTCCCTCTGCGCCGTCGGCCCCGCCGCGCTCACCGACCCCCCGCCCTCAGGTGCGCGCGCGCTCCCTCGCTCCCGCCGCCCCTTCCGCCCTAGCCCTAGGGTTTCCTACTTTCCTTCCTCGTGTGTCGATTAGGTTTTTTTTGCACCTCCCAAGTTTAGAGTTCGCGCGTTTGGGTTTATGGAAATTGGAATACCCAGGTTGGTAGATGTCGATGTGCTACGAGTGGTACTCCGCTGTGTAGAATTAGGGCGTCGTGGTGTAAGGCCTGATTGAATTGGTAGCAATTCTAATGTGCGTGTGATTTTCTTCAGGATAACTTGTCACGGCGAGTTTAATGGGTTCCATGGATTGGATTTCTATAGATTCTAGTGGGTTTTGCATCAGTTCCTTGACTACAACTTAGCACTTACCTGGATCTGCTTATAGTACAGAAATTTTGGACTGGGAAATAGGAATCTCACTGAGTATCTCTGTTTGCTAATGGGTCTCCAAGTGTTTTGTGCATTTCTATGTATAGGATGGCTGTGGTATATACACATATTTAGATGTTCTGAAAACATTTCTCTCCCTTACTATTTCTCTTGTTCCACCATCCCCACTTATCCGATAATTAGTGGATAATGTGGATAGTATGCGTAAAATGCATAGTTTACATACACGTTTACCATAGTTACTCTCTTCTGTATGTTCGTCAGAAAATATAGCAGCTAGTTTAATCGAAGCATTAACTGAGATAAAATTAATACATATATGCAGGTGATTGAAATTTCTTTACCAATACTGCAATCTCAATGTGCGTTTATGTCCACCATAATGTATTTGGTTCCTTTGTTTAAATTCCAAATTCTTGCACTGAAGATTAGGGGTCAGACTGAAGATTTTAGTTCTGTGCTACAGCTTGCAGAGTAGGGGTTAGATAACCAAGGTGTGAAATATTTGGAAGCAAATGCTTTATCATAAATATGGTTTTGTGTATTTGACTCATAATTCTTAAATTCCGAATAATTTTAAGTCTTAGTCAGTCTTCACTAGTTAAATCTTGTTATGTGGTCAGAGAGATGTGACTTTAAGCAAACATCTTACCACCTGCTTGCATTTCATGGTTACGCTCAGTAATTCTCCTGAGTTCTTAGTCTTATAGTAAGTTTTGTATTGTACCTATAACTTTAGGTGAAGAGGAGGTGGGGATTGATGGTTGGAACAGCATGGATAATTGTTATGCATTTTTGTACATCAAGGAGGAGAGGGGCAAGAAGAAACGGGTATTGGTAAAATGTCTGGTGATCGGTGATGTCCTTGCCATTGATGTCCTGGATCTTGAGGCACAGAATAAAGGCCCTTATAATATCCAGATCAAGTATGTTTCAAAGCTGCACCTTCTTGCTTTGTTTTGTACCATACTTATGTTTCTGGTGCGATTTAAGTATGTAAAGAAGCAGAAGCAGTAATCTATTTCCTCCGTCCCAAAATATAAGAATTTCTAGCATTTGAAATTTGTCCCCAAATATAAGGACTTCTAGATATTATTTTGCCCAGCAACCACCCCTCATTTAGTTTTCATCACATCTTATCCCCAACGAGCCCTCATATGATAAGGGGCATCATAATCTTTTCCCTTCATCCTTAGTCTCTCCAAAAAATCCTGAAGTCCTTATATTTTGGGACGGATGGAGTGCAAATAAGTGTAGAACCATTATATGGTTATTAGCAACGAACACTGTCTTGTAATCTCGTATTATGCAGATGCATTATTTTGTTCACTCTGCGATTTGCCAGTTCCATTAAACTGTTCCTTTCTCATCTTGAAGGTTCTGGCTTATTTTTGGGTATCTTACTTTTGTTTCTTGTGTGCAGTGTGAAGGATTTCTTCTCCGAGGAGCAGCCAAAGAACTACGGGAACATGTACAAAAACTTTGCAGGCTTAATTGAGACCATGAACTCAAATGCATTGAGCAAATTGGATGAGAAGGATGCTGGTGCTGCCAAGAACCCTGAGGTTGAGACTAGCTCATCAATACACAGGTAATTGATAATTTTCTATGCTTCCTTTTTGGCAATACTCCCTCTTCTCCAAAACACATGCGTGTGCACGCGCGTGCATATTTTGTTCACGTACATTGGACTAGACGCTACTGTATTGCTTTGGACCTTTGGTCTTAAAACAATAAAATGGGAAACTGGTAATGATATTTCACATCATTAATATAAAATTATGTTATAATCTGAATATTCTTCTAATCTTAGCTGCCTGCTAGTTTAGGAAAATGCTAGTGAAACGTGTCATTGAAAGCTGAAGCTTCTCAAGGGATAAAATAACTTTTAATTAAGTGCCTTAACTGGTTGTCTCCAAGATTTTTTTTTTCTAACATAAGGCACTTGTGTTCCAGATCTGAAAATCCAGGCCTGAGAACTACTGAACCTGGGTATGACCTCAAGACATTTGTATTTCTCCTTTTGCTTTTATATGTGCACATTCTTCATTATTCAGCCCGCCCTTTTTGCTTCTCTCTACATTGTTACATGTTATCAAACTTTACTATATTGTTCCTGCTTTTCCCACAGTTATTAATGGTATTTATACACGGATTAAATTCTGAAAACCATTGGCATATAGATAGAAATGAAGAGCCACAGTAATTCCTTTGCCTTTCTGGAATAGATTGCTAAATTGACCACCAGCAGTGTGATTCCTTTTTTAAGTTGCCACTAGCTGTATTATTTTCTCAAACTATTTTGGACAAGTTAACAACACAATGCTACATTATGTCAGTTAAGATTACAGATATATGAATGTTTGGACCTATTGTGAGCAGAATGCATTTTTAAGGTAGCCATGATTATGACAGATGTATCTGTTATTATTACCAAAATTATCTTAATCCATTGCCTTCTCATGTACCATCAAATTTTAATGTAGTCAATTCTAAGGTCATGTTGCCATTTTATGTCTTGTATTTCTTTCCTTGGTCATTTCTGTGATGCTTGTCTACGCAAATAATGAAAATAACATGAAAATATATGTTTGTAAATATTTAAATAAGGTGTGTGGTGTGCCTATTTTAGCACTGAACCAACATGTTGAGGCCCATATAGTGGTAGTAATGTGTACTCTGCAATTTTTCTCGCCCAAAATATCACAATTATAAGCTTATTTTCTAGGTTTCATTGAATGAATCATTGTTGGTTCCTTATATGAACTTGTCTCTTTTGCCGGGTCGGCGGAAGAATGCTGACCAAATTTCATTAAGATTGGGAGTATAATACATGTATCCCGACATTAAACTGTCGAGTCAAGGCAAAAGCTTTGAAACAAAGCGAGAAAAAGCAAAGGGGAAAACTATTTACAGAAGCAGCAACTCAAAGGTCTACTCCTCACTAAACTGAAAAATACTGGCAGCTCTCCAGACCATCACATCTTCTTTAATGTCTGCAACCAGCGACTCCACAGTTTTCTCCTTTTGATCGAAGACTTGAGCATTTCGTTCTTTCCAAATCCGCCAGCAAACCAACATGAAGGAGTCAATATATGTTTATATGAACTTGTCTCTTCAGTGCATTACATTGACTGAACAAGTTGTGTTTTTGTTGAAAGTCAACTAAACATAAGCCAGAGCTGAGTAATTATTGATGGAATTTTTTGATTCATCATTAACCTACTGATATATATGCACTGATATGCCATGAACATCGAAGTTCATCATAGCATTAAAGAGATGTAAAAAAAATGTACATATGCACTTAATAATTGTATTGCTATGTGTGTGCAAATTTAGTAAAAAGAGTAATTAGAGTGGTTTCATGATAGTTAATTAGTTGTTCTTTCTTGTGAATTCTGTTGTTACAGCTTGGTTTATCCTCCAATAGCTCCACTTGGTCATGATGATGCCTTCCCTGGCCCTGGCGCAGGCTTCTATCCTCATAGGTTTGTTTACGATTATGTAAAATATCAATGAAGCATATGCTAACATAATTAATAGTTTCTGTTTTTGTTTGCAGTGGTATTGGTGGGGGTGGCAGCATGCATGTTGGTAATATGACACCCACAGAACACACCCTAGAATCTTTCTGTTTTATCTTTGTGCATCTCGGCAGTCTGATTTACATTTGTTTCATACAACAGGTCCAAACGATCCACGCTTCTTTCCTTCTAATCCCTTCCCTGTGCCCTTTGGTGGCCCTGGGTAATCCACTTTATCTTCCACTTTGTCATTTCATTACCCATGCTGTCCTTTTTATTCTGTTATAAATGGACTTAATATTTGAAAATAGGAGTGTTCCACCGGGTGGTCGTTATGATCCAATTGGTCCACCAGATGTTCCAGGATTTGAACCTTCTCGCTTTGTGAGGTAAGATAGTTCAGCAACGTTTTTCATACAATTATTCTTAGCTTATCTCTGATTTCCAAGATCACCGACTACTGTACTCAACTCAGTTTTTAAAACCCATGACCAACAGATCAAACCGTAAACCTTCAGACACTGTCTCAGCTGCAGTTGTAACAATAGTTTTTTATTAACATAATGATATTAGATTAGTGATATCCTACATATTTTTATGTTCCTTTTGCATCGCAAAAGCTCTAAAACAGTGCATTTGCATCTAGTTAAAACTGTCAATGCTTACAGGCAATTCTATTTTAATTGGGAGATACTCTCTGACGCTCTGATCAACGGGCAATGCTAACCTATGAATTTCTTTTCACACAGGCGTCCGAGGCCTCCAGCTGGGACTACTCACCCAGACCTTGAGTTCTTCCAGCCGGGGCCGCAGGGGCCCTTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA024128