BGIOSGA023967

From RiceWiki
Revision as of 16:49, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA023967

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023967, complete gene.

LocusTag

P0453E05.113

Ensembl Transcript ID

BGIOSGA023967-TA

Ensembl Protein ID

BGIOSGA023967-PA

Length

4586

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22408496..22413081

Sequence Coding Region

22412680..22413081,22411753..22412037,22411332..22411649,22410631..22410858,22409972..22410069
,22409648..22409753,22408982..22409524,22408769..22408901,22408496..22408560

Genome Context

<gbrowseImage1> name=IndicaChromosome07:22408496..22413081 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:22408496..22413081 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGCTGCGTCGCGTCGAAGAACGCGGTGTCGGTGACGCCGGCGGCCGACTCGTCGGGGGCGCTGCGGGAGAGGAGCCTGCCGCGGGCGCCGGAGGCCGCGGCGACGGTGGTGTCCGTCACCGCGTCCTCCCTGCGCTGCTCCTCGGCTGCGGCGGCGGGTAGGAGGTCGGAGAAGAAGAGGGACGAGGCGGCGGTGGCGGCGGCGGGGGAGGAGCCGTCGGAGAAGGCCGTCATCGCGGCGGCGACCGCGTCCCGGAGCTTCCGGCTGCGGAGCCTCCGCCGGAGCCTGGAGGGGGAGCAGGTGGCCGCCGGGTGGCCGCCGTGGCTCAGCGCCGTCGCCGGGGAGGCCATCCAGGGGTGGATCCCTCTCAAGGCTGACTCCTTCGAGAAGCTGGAGAAGGTTGGGCAAGGCACCTATAGCAGTGTATTTAGGGCACGGGAACTTGATACTGGAAAGATTGTCGCCTTGAAGAAGGTGCGGTTTGACAATTTTGAGCCAGAAAGTGTTAGATTCATGGCAAGGGAGATACAAATATTGAGAAGGCTCGATCATCCAAATGTTATGAAGCTAGAAGGTTTGATTACTTCTCGGCTATCATGCAGTCTCTATCTAGTATTTGAATACATGGAGCATGATCTTGCTGGACTTTCTTCCTCCCCTGACATCAAGTTTAGTGAAGCACAGGTCAAGTGCTACATGAACCAGTTACTGTCAGGACTGGAGCATTGCCATTCACGTCGTATTGTACATCGCGACATCAAGGGTGCCAATCTCCTTGTGAATAATGAAGGGGTTCTAAAAATAGCTGATTTTGGCCTTGCTAATTACTTTGACCCCAACAAAAACCATCCGCTGACCAGCCGTGTCGTTACTCTGTGGTATCGACCACCTGAACTGCTACTAGGTTCAACTCACTATGATGCAGCTGTTGATTTGTGGAGTGCTGGGTGTGTATTTGCTGAAATGTTCCGTGGGAAACCTATCCTGCAGGGAAGAACTGAGGTGGAGCAACTGCATAAGATTTTTAAGCTATGTGGTTCCCCTGCTGATGAGTACTGGAAGAAGTCAAAGTTGCCTCATGCGACAATATTCAAACCACATTGTCCTTATCAAAGTACCCTTCAAGATGTTTTTAAAGAAATGCCAGCAAATGCATTGAGATTACTAGAAACTCTTCTATCAGTGGAGCCCTACAAACGTGGTACTGCATCTGCTGCTCTTACATCTGAGTTTTTCAAGACAAAGCCTTACGCATGTGATCCCTCAAGCCTGCCGAAGTATGCACCCAACAAGGAGATGGATGCAAAATTACGAGAAGATTCACACAGACGAAAGGCTAGCAGAGGTCATGGGCCAGAAGCATCAAGGAAATCAAGGCTCAGCAGAGCTGCAAGAGAAACAACTACAGTTAATAAGCAAACTGATGGCAAAGAGGAGTCCAAAACTAAAGCAAATGGAACCAAGGACAACTCAATATTGGATCGTACAAAGGTAAATTGTGATGCTAGGTTATTTTCAGATATACAGCCAGTTTCAGTGGCCCAAGTCAAAGAAAGGTCTCGCCATGTTAAGAATGATTCACGAGAAGAGATCCCTTTCTCTGGACCATTGATTGTTTCATCATCTAGTGGCTTTGCTTGGGCTAAAAAACCACCAGAAGATCGTTCATTCGCTAGATCTCGGACCAGATCTAGTTCAAGGGGCCAATTTACTGCTGAGTTAGATCAGGACAATAAGATGCCAGCTAAAGAGAACCAGAACCTCGGCTTGAAGGAACAACCTAACAGAGACATGCATATAGCACGTGCCAACTCCAAAGTTCGAGAGCCTCATGATGCAGCAAAGCGTGCCGTTCTGAAGAAATGGTCACAGTTAGGACGTCCAGATTCCTTTGATTCTTACGACACTTACCACTCTCAGAATTTTTCTAATGCAATGTATCTTGGGGATAGCCTCTCGTCAAAAAACAGCATCAAGGGTGATCATGATCAAGGAGAGAGGGTTGAATATTCTGGCCCTTTGTTATCTCAGTCACACAAGGTTGATGAACTGTTAGAGAAACATGAGCGCCACATCCGGCAAGTAGTTCGGAAATCGTGGTTCAGTAGAGAGTATGCTGGAAAGCAATTCTACTTAGCCATTTTACTAGCCTTAACCACATCAGGAATTATGTGA</cdnaseq>

Protein Sequence

<aaseq>MGCVASKNAVSVTPAADSSGALRERSLPRAPEAAATVVSVTASSLRCSSAAAAGRRSEKKRDEAAVAAAGEEPSEKAVIAAATASRSFRLRSLRRSLEGEQVAAGWPPWLSAVAGEAIQGWIPLKADSFEKLEKVGQGTYSSVFRARELDTGKIVALKKVRFDNFEPESVRFMAREIQILRRLDHPNVMKLEGLITSRLSCSLYLVFEYMEHDLAGLSSSPDIKFSEAQVKCYMNQLLSGLEHCHSRRIVHRDIKGANLLVNNEGVLKIADFGLANYFDPNKNHPLTSRVVTLWYRPPELLLGSTHYDAAVDLWSAGCVFAEMFRGKPILQGRTEVEQLHKIFKLCGSPADEYWKKSKLPHATIFKPHCPYQSTLQDVFKEMPANALRLLETLLSVEPYKRGTASAALTSEFFKTKPYACDPSSLPKYAPNKEMDAKLREDSHRRKASRGHGPEASRKSRLSRAARETTTVNKQTDGKEESKTKANGTKDNSILDRTKVNCDARLFSDIQPVSVAQVKERSRHVKNDSREEIPFSGPLIVSSSSGFAWAKKPPEDRSFARSRTRSSSRGQFTAELDQDNKMPAKENQNLGLKEQPNRDMHIARANSKVREPHDAAKRAVLKKWSQLGRPDSFDSYDTYHSQNFSNAMYLGDSLSSKNSIKGDHDQGERVEYSGPLLSQSHKVDELLEKHERHIRQVVRKSWFSREYAGKQFYLAILLALTTSGIM</aaseq>

Gene Sequence

<dnaseqindica>1..402#1045..1329#1433..1750#2224..2451#3013..3110#3329..3434#3558..4100#4181..4313#4522..4586#ATGGGCTGCGTCGCGTCGAAGAACGCGGTGTCGGTGACGCCGGCGGCCGACTCGTCGGGGGCGCTGCGGGAGAGGAGCCTGCCGCGGGCGCCGGAGGCCGCGGCGACGGTGGTGTCCGTCACCGCGTCCTCCCTGCGCTGCTCCTCGGCTGCGGCGGCGGGTAGGAGGTCGGAGAAGAAGAGGGACGAGGCGGCGGTGGCGGCGGCGGGGGAGGAGCCGTCGGAGAAGGCCGTCATCGCGGCGGCGACCGCGTCCCGGAGCTTCCGGCTGCGGAGCCTCCGCCGGAGCCTGGAGGGGGAGCAGGTGGCCGCCGGGTGGCCGCCGTGGCTCAGCGCCGTCGCCGGGGAGGCCATCCAGGGGTGGATCCCTCTCAAGGCTGACTCCTTCGAGAAGCTGGAGAAGGTACTTGGATTCAATTCCAATAGCTCGTCGGTCATTTTCCGTTGCAATTCTTTTAATTTTTTTCAGGCGTGTCAATTTTTAGATGGAGGATGGCTGTTAAGCTTGTTAAATTTCTGTGGATTGGTTGGCATCTTGCAAGAATCTCATACTGCAGCGTATTAGTTGGAAGTACTTTGTTTGGTGATGGATTATGACATGCCGAATAAACTAGTACTAATATGCAATTATCAAGAGGATAAAGGGGAGAATTTGGGGGGTTTGGTGCCTCCTCCTTTGAAGCAGCACAAATTTTAGTTTTCTCTGTTGTTCATACGGTTTCCTGGTTGGAAATTAAATCTTGCTGTATCATTTCGTCTATCTGATCATCATCATGGGCAATTCTAACTGGGAGAAGAACAGGATTGCTATTATACCAGTTTATGTTTACATGGCCACTGAATGAGTGGGATACATGCATAATTTGTAAACTAACCATTCACCCTTGTATGCAGCTATGAATTTGCCAAAAAAATATTGTATGTCTTGTTATGCACACTTTGTGTTTGAGTTTTTTTTTCCCTTTCTAGTTATGCAAGTTCAATTTCTTTAGCTGTATGCTCTCCTTAGGGTCTGACAATACTCTTTCTTGCACTGTATGTGTAGGTTGGGCAAGGCACCTATAGCAGTGTATTTAGGGCACGGGAACTTGATACTGGAAAGATTGTCGCCTTGAAGAAGGTGCGGTTTGACAATTTTGAGCCAGAAAGTGTTAGATTCATGGCAAGGGAGATACAAATATTGAGAAGGCTCGATCATCCAAATGTTATGAAGCTAGAAGGTTTGATTACTTCTCGGCTATCATGCAGTCTCTATCTAGTATTTGAATACATGGAGCATGATCTTGCTGGACTTTCTTCCTCCCCTGACATCAAGTTTAGTGAAGCACAGGTATGTCCTTGTTGACTAAACTGTGCTTACTGAGAATCCCTTCATAACAGATTGGCATTCATTGTGCTGACCTGACTTTTTCTCTGGTTGTCTCCTATTGCAGGTCAAGTGCTACATGAACCAGTTACTGTCAGGACTGGAGCATTGCCATTCACGTCGTATTGTACATCGCGACATCAAGGGTGCCAATCTCCTTGTGAATAATGAAGGGGTTCTAAAAATAGCTGATTTTGGCCTTGCTAATTACTTTGACCCCAACAAAAACCATCCGCTGACCAGCCGTGTCGTTACTCTGTGGTATCGACCACCTGAACTGCTACTAGGTTCAACTCACTATGATGCAGCTGTTGATTTGTGGAGTGCTGGGTGTGTATTTGCTGAAATGTTCCGTGGGAAACCTATCCTGCAGGGAAGAACTGAGGTAATTATTTGAGTTGTATTAACTTCTAGAGTCCATAGGTAACAAAATGTATTATGCTATAAAGGCCATTGAGATTTAAACTTCATGCTCCCGTATATTTTATGTATGAATTGATTTCTTTGCAAGCAGCTGACTTTTCAGCCTGTTAGGGCACTGTTGATGCCTTGTTTGAGCATCATGATTATGTCAAGTGCTAAATACTGGATATTGAGATTATAAATTAACGTAATATTCTGTACTGGACATCTTTTGACTGGTATGTTCAACATGAGGATGAGAAATAGGGGAATGTATTGACAACTGCTGGCATTCATAGATGCTATAAAAGTGTTTCTGGCTATAATTTCAATGGGCTATTTTCTGTTAGTGCAGCTTGTTTTATGCTTTAGTTATGCAACCCTATATAACCTAGTTATCAAAATCCCTGAGTAATATCATGCTGCATATAGTCTCACATCTCTTGGTTTTTACAGGTGGAGCAACTGCATAAGATTTTTAAGCTATGTGGTTCCCCTGCTGATGAGTACTGGAAGAAGTCAAAGTTGCCTCATGCGACAATATTCAAACCACATTGTCCTTATCAAAGTACCCTTCAAGATGTTTTTAAAGAAATGCCAGCAAATGCATTGAGATTACTAGAAACTCTTCTATCAGTGGAGCCCTACAAACGTGGTACTGCATCTGCTGCTCTTACATCTGAGGTAAGATTGGACCATCTGGTATCCTATATAAGTATTGTATTATTTAAGGATAAAAAGGTCATATATTTGGAAGTCAGTCTTTCTATTGTTGGTTCGTTGTAAATTTATTGCTGAAACTATATCCTGCCAGTTTATTTTGCTATGCATCACCATGTAATACTATTCTACACTCCCTACTTCTATGAAATTGCAAGTGTAGAGAAGATGTTCAAGCTATTGTAGCATTACTAAGTTATTGTCAGTATAACTAGCATTTAGTTTGGCTATAAGTCCTCATTTTAGTGTGGGCTATAGTAAGTGCTCTTGTCCCTGACATATAGTACCAATGTGTTGTACTGTTGTCCATTGTCTCACCACTAAGAATTAGCAAAGAACTCAGGTGCAGAGGCCTGGCATGTTCATGGTAACTCTTTCAAACTTCCAATTGACTACTACACAGTACACATAACATGTGTAATGAAACATGGTCATTAATCATTTTTGTATGTATTGTGAAAGTTTAAATGATCATATTGAATCAAACTGCTAAAAAATGCATGACCTTGTTGTGTACTGAAACAGTTTTTCAAGACAAAGCCTTACGCATGTGATCCCTCAAGCCTGCCGAAGTATGCACCCAACAAGGAGATGGATGCAAAATTACGAGAAGATTCACACAGGTGGGTGTGTTAAATGTGGAATCATTGTTTAATATGGAAAGGAATTAGAAACTTAGAATCACTTAGTTCAAGTATTATTTTCATAACTTGAAAATGTTTTGTAGAGAGGAGCTCCCAACAGTGTATAATTAAGTTGGTATCAATACAAATGATAGCTGGAAGTTCACTGCTTGTTTGTGCACTGCATAATAATCTTATTTTTTGCTTTTATGTTCCAGACGAAAGGCTAGCAGAGGTCATGGGCCAGAAGCATCAAGGAAATCAAGGCTCAGCAGAGCTGCAAGAGAAACAACTACAGTTAATAAGCAAACTGATGGCAAAGAGGTAGATTTTTTTTCTTGTATGAGCCAACCAGGGGCATGCGCCAACTTGGCAGTCTGGTTGAAGATTTTTAATTGCTGCCATTATTATTCATTAAATCTCTTCTGGCTTCCTTTCTTGGTTCAGGAGTCCAAAACTAAAGCAAATGGAACCAAGGACAACTCAATATTGGATCGTACAAAGGTAAATTGTGATGCTAGGTTATTTTCAGATATACAGCCAGTTTCAGTGGCCCAAGTCAAAGAAAGGTCTCGCCATGTTAAGAATGATTCACGAGAAGAGATCCCTTTCTCTGGACCATTGATTGTTTCATCATCTAGTGGCTTTGCTTGGGCTAAAAAACCACCAGAAGATCGTTCATTCGCTAGATCTCGGACCAGATCTAGTTCAAGGGGCCAATTTACTGCTGAGTTAGATCAGGACAATAAGATGCCAGCTAAAGAGAACCAGAACCTCGGCTTGAAGGAACAACCTAACAGAGACATGCATATAGCACGTGCCAACTCCAAAGTTCGAGAGCCTCATGATGCAGCAAAGCGTGCCGTTCTGAAGAAATGGTCACAGTTAGGACGTCCAGATTCCTTTGATTCTTACGACACTTACCACTCTCAGAATTTTTCTAATGCAATGTATCTTGGGGATAGCCTCTCGTCAAAAAACAGCATCAAGGTGAGGCATTTACATATTTGATAGTTTCTGCTTCATTGGTGTTAGCAAGGTTGTAAACAGTGTGTTGTTTAAACCTTTAGGGTGATCATGATCAAGGAGAGAGGGTTGAATATTCTGGCCCTTTGTTATCTCAGTCACACAAGGTTGATGAACTGTTAGAGAAACATGAGCGCCACATCCGGCAAGTAGTTCGGAAATCGTGGTTCAGTAGAGGTAATTTTGATTCATATTCAGTACATACTTTTCTGCATTGATGTTTGACTTTTGGCGTACCTTAGAAAATCTACTTTATTCCCTTCCTCTTCTTTCCTTTTTTTTTTTCCGATTCTCTTGAATTTGGCATTTTTTGGAATGTCGGCTACAGGAGTCTGTTTACTCAAATGCAAATTCATATTATGAATTTTTATGTGTTGCAATTTAGAGTATGCTGGAAAGCAATTCTACTTAGCCATTTTACTAGCCTTAACCACATCAGGAATTATGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023967