BGIOSGA023962

From RiceWiki
Revision as of 16:49, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA023962

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA023962, complete gene.

LocusTag

OJ1579_C03.21

Ensembl Transcript ID

BGIOSGA023962-TA

Ensembl Protein ID

BGIOSGA023962-PA

Length

1867

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22536629..22538495

Sequence Coding Region

22538262..22538495,22538115..22538151,22537855..22538038,22536629..22537763

Genome Context

<gbrowseImage1> name=IndicaChromosome07:22536629..22538495 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:22536629..22538495 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCGTCCTTCCCTTGCTCGCCGCCGCCCTCCTCGTCCTCTTCTCCGGCCTGCATCCCGCCGCCTCCACCGCCGCCGCCGGCGGCGAGGCGGCCACCGTGGTTGTCAAGGCGGCGGCGGCCGTCTCCCGCACCGACGACAACTTCGTCTGCGCGACGCTCGACTGGTGGCCCAGGGACAAGTGCAACTACGGCATGTGCCCCTGGTACAACGCCTCCATCATTAACCTGGATCTGAACAACACTATTCTGAACAATGCTGTCAAAGCGTTCAACTCGCTTAGGATTAGGCTCGGAGGGTCTCTTCAGGACCAGGTGACGTACAAAGTCGGCAGCAACTACGGCGATTGCCGGAGCTTCCAGCGAGACGACGGCGGCCTCTTCGGCTTCACCGACGGCTGCCTTGAAATGAACCGATGGGACGAGCTCAACGTCTTCTTCAAAAGAACCAACACGACGGTGACGTTCGGGCTGAACGCGCTCAAGGGCCGGAGGAAGGCCGCCGGCGGCAAGGACACGCTGTACTCCGGCGACTGGGACGCCCGGAACGCGCTCGACCTGATGCGGTACACCGCCGGCAAGGGCTACCGCGTCGAGTCGTGGGAGCTCGGCAACGAGCTGTCCGGCAGCGGCGTCGCGGCGAGGGTGGCGGCGGCGCAGTACGGCCGCGACGTGGCGGTGCTGAGGAAGGCGGTGGAGCGTGTGTACGGCGGCGGCGGCGAGGTGCCGAAGGTGCTCGCGCCGGGCGGGTTCTACGACGGCGCGTGGTTCTCGGAGATGCTGCGGGTGTCGGGGCGCGGCGCCGTCGACGGCGTGACGCACCACATCTACAACCTCGGCTCCGGCAAGGACAGGGACCTGGCGAGGAAGATGCAGGACCCGGGGTACCTCGACCAGGTGGAGAAGACGTTCCGCGACATGGCGGCCACGGTGCGGGGCTCCGGGCCGTGGAGCTCGCCGTGGGTGGGCGAGTCCGGCGGCGCGTACAACAGCGGCGGGAAGGGCGTGTCGGACAGGTACGTGAACGGCTTCTGGTACCTCGACCAGCTCGGCATGTCGGCGGCGCACGGCACCAGGGTGTACTGCCGCCAGGCGCTCGTCGGCGGCAACTACTGCCTCCTCAACACCACCACCTTCGTCCCCAACCCCGACTACTACGGCGCGCTGCTCTGGCACCGCCTCATGGGCCCGGTGGTCCTCAAGGCGGCGACCACCGCCGGCGGCGGAGGTTCGCCGTACCTCCGGTCGTACGCGCACTGCTCGAGGGAGAAGCCGGGGGTGACGGTGCTCCTGATCAACCTGTCGAACGCGACGGCGTTCGACGTGTCGGTGGCCGGCGGCGCGCTCGGCGCGGCGCCGTGCGGCGGGCGGAGGGAGGAGTACCACCTGAGCCCGCGCGGCGGCGACATCCGGAGCCAGGTGGTGCTGCTCAACGGCGAGGCGCTGGCGCTCGGCCCGGGCGGCGAGATCCCCGAGCTCCGGCCGGCCGTCGTCGGCGACGGGTGCGCGGCGCCGCTGCGCGTGGCGGCGCGCGGCATCGCGTTCGTCAGGTTCACGGAATTCAAGGCTCCCGCATGCGCGGCCTAG</cdnaseq>

Protein Sequence

<aaseq>MAAVLPLLAAALLVLFSGLHPAASTAAAGGEAATVVVKAAAAVSRTDDNFVCATLDWWPRDKCNYGMCPWYNASIINLDLNNTILNNAVKAFNSLRIRLGGSLQDQVTYKVGSNYGDCRSFQRDDGGLFGFTDGCLEMNRWDELNVFFKRTNTTVTFGLNALKGRRKAAGGKDTLYSGDWDARNALDLMRYTAGKGYRVESWELGNELSGSGVAARVAAAQYGRDVAVLRKAVERVYGGGGEVPKVLAPGGFYDGAWFSEMLRVSGRGAVDGVTHHIYNLGSGKDRDLARKMQDPGYLDQVEKTFRDMAATVRGSGPWSSPWVGESGGAYNSGGKGVSDRYVNGFWYLDQLGMSAAHGTRVYCRQALVGGNYCLLNTTTFVPNPDYYGALLWHRLMGPVVLKAATTAGGGGSPYLRSYAHCSREKPGVTVLLINLSNATAFDVSVAGGALGAAPCGGRREEYHLSPRGGDIRSQVVLLNGEALALGPGGEIPELRPAVVGDGCAAPLRVAARGIAFVRFTEFKAPACAA</aaseq>

Gene Sequence

<dnaseqindica>1..234#345..381#458..641#733..1867#ATGGCCGCCGTCCTTCCCTTGCTCGCCGCCGCCCTCCTCGTCCTCTTCTCCGGCCTGCATCCCGCCGCCTCCACCGCCGCCGCCGGCGGCGAGGCGGCCACCGTGGTTGTCAAGGCGGCGGCGGCCGTCTCCCGCACCGACGACAACTTCGTCTGCGCGACGCTCGACTGGTGGCCCAGGGACAAGTGCAACTACGGCATGTGCCCCTGGTACAACGCCTCCATCATTAACCTGGTAATTACCACCCCTGAAACTTGATTAGCCAAACTTAATCACCTTCATTTCATATATGGATCAATCTACTTCTAACTGACACTGAGCACGTCACTCTTCTTCCCTCGCAGGATCTGAACAACACTATTCTGAACAATGCTGTCAAAGGTAAATAATTTGCAGATCACTGATCTATCAAAAAAAATTGTACTGAAATTAACCAGAGTTTTATGTGATGTTGCAGCGTTCAACTCGCTTAGGATTAGGCTCGGAGGGTCTCTTCAGGACCAGGTGACGTACAAAGTCGGCAGCAACTACGGCGATTGCCGGAGCTTCCAGCGAGACGACGGCGGCCTCTTCGGCTTCACCGACGGCTGCCTTGAAATGAACCGATGGGACGAGCTCAACGTCTTCTTCAAAAGAACCAAGTAATTAAACTGCAATTATCGGCTAATTAATCGCCATTTCGAGGAGGATTAAATGACTAATTATCTTTGATTTGATTTGATTGACGTGCAGCACGACGGTGACGTTCGGGCTGAACGCGCTCAAGGGCCGGAGGAAGGCCGCCGGCGGCAAGGACACGCTGTACTCCGGCGACTGGGACGCCCGGAACGCGCTCGACCTGATGCGGTACACCGCCGGCAAGGGCTACCGCGTCGAGTCGTGGGAGCTCGGCAACGAGCTGTCCGGCAGCGGCGTCGCGGCGAGGGTGGCGGCGGCGCAGTACGGCCGCGACGTGGCGGTGCTGAGGAAGGCGGTGGAGCGTGTGTACGGCGGCGGCGGCGAGGTGCCGAAGGTGCTCGCGCCGGGCGGGTTCTACGACGGCGCGTGGTTCTCGGAGATGCTGCGGGTGTCGGGGCGCGGCGCCGTCGACGGCGTGACGCACCACATCTACAACCTCGGCTCCGGCAAGGACAGGGACCTGGCGAGGAAGATGCAGGACCCGGGGTACCTCGACCAGGTGGAGAAGACGTTCCGCGACATGGCGGCCACGGTGCGGGGCTCCGGGCCGTGGAGCTCGCCGTGGGTGGGCGAGTCCGGCGGCGCGTACAACAGCGGCGGGAAGGGCGTGTCGGACAGGTACGTGAACGGCTTCTGGTACCTCGACCAGCTCGGCATGTCGGCGGCGCACGGCACCAGGGTGTACTGCCGCCAGGCGCTCGTCGGCGGCAACTACTGCCTCCTCAACACCACCACCTTCGTCCCCAACCCCGACTACTACGGCGCGCTGCTCTGGCACCGCCTCATGGGCCCGGTGGTCCTCAAGGCGGCGACCACCGCCGGCGGCGGAGGTTCGCCGTACCTCCGGTCGTACGCGCACTGCTCGAGGGAGAAGCCGGGGGTGACGGTGCTCCTGATCAACCTGTCGAACGCGACGGCGTTCGACGTGTCGGTGGCCGGCGGCGCGCTCGGCGCGGCGCCGTGCGGCGGGCGGAGGGAGGAGTACCACCTGAGCCCGCGCGGCGGCGACATCCGGAGCCAGGTGGTGCTGCTCAACGGCGAGGCGCTGGCGCTCGGCCCGGGCGGCGAGATCCCCGAGCTCCGGCCGGCCGTCGTCGGCGACGGGTGCGCGGCGCCGCTGCGCGTGGCGGCGCGCGGCATCGCGTTCGTCAGGTTCACGGAATTCAAGGCTCCCGCATGCGCGGCCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA023962