BGIOSGA026125

From RiceWiki
Revision as of 17:00, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA026125

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026125, complete gene.

LocusTag

P0616D06.112-1

Ensembl Transcript ID

BGIOSGA026125-TA

Ensembl Protein ID

BGIOSGA026125-PA

Length

2178

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23332235..23334412

Sequence Coding Region

23332235..23332378,23332462..23332677,23333030..23333100,23333216..23333452,23333888..23334020
,23334110..23334412

Genome Context

<gbrowseImage1> name=IndicaChromosome07:23332235..23334412 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:23332235..23334412 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCAGCAGCTGGGCCTCCTCGCCGCCGTCTTCGTGTCGCTCGCCGTGCACGTCGCGCTCCACTGCCCCATCCAGCCGCTCGCCCCGCCGCCCGCACGCCCACCCGCCGCCGCTCGCTTCCCTCCCAACAACCTCCTCCAGAATCTGGAGAAGCTTGGGGAAGGGATGCTGAGCGCGCCGGAGGACGTGTACGTGGACGACGCCAGCGGCGAGGTGTTCACGGCGACGAGGGACGGGTGGGTGCGGAGGATGCAGGCGAACGGGTCGTGGGAGCGGTGGGGGCTCGTCGGCGGCACGGGGCTCCTCGGCGTCGCCCCGTCCGCCGACGGCGCCATGCTCGTCTGCGACGCCGACAAGGGATTGTTGAAAGTGGATGAGAATGGACGCGTGACGCTTCTTGCTTCGACTGTCGAAGGCTCCACGATCAGGTTCGCGGACGCGGCGATCGAGGCCTCCGATGGCACGGTGTACTTCAGCGACGCCAGCACCAGGTTCAGCTTCGACAACTGGTTCCTCGACTTCTTCGAGTACCGCTTCACCGGCCGCCTGCTCAAGTACGACCCCCGCACCGGCGAGGCCTCCGTCGTGCTCGACGGCCTCGGCTTCGCCAACGGCGTCGCCCTGCCGCCCGACGAGGCCTTCGTCGTCGTCTGCGAGACGATGAGGTTCAGATGCTTGAGAGTGTGGCTGAAAGGGGAGAAGGCTGGGGAGGCAGAGATCTTCGTGGACAACCTGCCGGGGAATCCAGACAACATTCGGCTGGGTTCAGATGGTCACTTCTGGATTGCCCTTCTCCAGGTGAGGTCTCCATGGCTGGACCTGATCTCTCGCTGGAGCTTGACGAGGAGGGTCATCGCGTCGTTCCCGGCGCTCGTCGAGAGGACCAAGGCGACGCTGAAGGGAGCAGTGGTGGCTCAGGTGTCGTTGAACGGCGAGATCGTGAGGGTTCTTGGTGATTCTGAAGGGAAGGTGATCAACATGGTCACTTCGGTGACAGAGTTCAACGGAGATCTCTTCCTCGGCAGCCTCGCGACCAACTTCATAGGGAAATTATCTTTGGCTAAGGTTGCACAGGATCAGGAGGATGCAGTTTCTTCGTAA</cdnaseq>

Protein Sequence

<aaseq>MAQQLGLLAAVFVSLAVHVALHCPIQPLAPPPARPPAAARFPPNNLLQNLEKLGEGMLSAPEDVYVDDASGEVFTATRDGWVRRMQANGSWERWGLVGGTGLLGVAPSADGAMLVCDADKGLLKVDENGRVTLLASTVEGSTIRFADAAIEASDGTVYFSDASTRFSFDNWFLDFFEYRFTGRLLKYDPRTGEASVVLDGLGFANGVALPPDEAFVVVCETMRFRCLRVWLKGEKAGEAEIFVDNLPGNPDNIRLGSDGHFWIALLQVRSPWLDLISRWSLTRRVIASFPALVERTKATLKGAVVAQVSLNGEIVRVLGDSEGKVINMVTSVTEFNGDLFLGSLATNFIGKLSLAKVAQDQEDAVSS</aaseq>

Gene Sequence

<dnaseqindica>1..144#228..443#796..866#982..1218#1654..1786#1876..2178#ATGGCGCAGCAGCTGGGCCTCCTCGCCGCCGTCTTCGTGTCGCTCGCCGTGCACGTCGCGCTCCACTGCCCCATCCAGCCGCTCGCCCCGCCGCCCGCACGCCCACCCGCCGCCGCTCGCTTCCCTCCCAACAACCTCCTCCAGGTACGGTACGTTGCGTTCTAGCTCGCCGCGCCATGCCGCGCTCATGTCGGCCGTTGGTGGATTCATGGTTAGCGATGTGGCAGAATCTGGAGAAGCTTGGGGAAGGGATGCTGAGCGCGCCGGAGGACGTGTACGTGGACGACGCCAGCGGCGAGGTGTTCACGGCGACGAGGGACGGGTGGGTGCGGAGGATGCAGGCGAACGGGTCGTGGGAGCGGTGGGGGCTCGTCGGCGGCACGGGGCTCCTCGGCGTCGCCCCGTCCGCCGACGGCGCCATGCTCGTCTGCGACGCCGACAAGGTAAATCAAAACAAGAAACATTTCTACGATGATACGCTTCCCTGCTTCAGATGAAGATAACCGAATGAGAGACAGTGCAAAAGTTGTTTACTGTTGGTGTAAAATACTCCCTCGTTCCCTAAATAAGAAAGTATTTTTAAACATGTTTGACCATTCGTCTTATTCAAAAACTTTTATAAAATATATAAAACTATATATATACATAAAAGTATATTTAATAATAAATTAAATGATAGAAAAAGAATTAATAATTACTTAATTTTTTTAATAAAATGAACGGTTAAATATGTTTAAAAAATATCAACAGCGTCAACATTTAGAGATGGAGGAAGTACTTAATTAAAATCTGCAGGGATTGTTGAAAGTGGATGAGAATGGACGCGTGACGCTTCTTGCTTCGACTGTCGAAGGCTCCACGATCAGGTTATCTTCCTGCAAATTACTTGTTTCACTGCAAACTACTATGCAATTTGCACAGTGCAAATCTGTAACTGCGACTGCGAATTCTCTACTGTTCTTCTCCGTTCGTCGTCTTCAGGTTCGCGGACGCGGCGATCGAGGCCTCCGATGGCACGGTGTACTTCAGCGACGCCAGCACCAGGTTCAGCTTCGACAACTGGTTCCTCGACTTCTTCGAGTACCGCTTCACCGGCCGCCTGCTCAAGTACGACCCCCGCACCGGCGAGGCCTCCGTCGTGCTCGACGGCCTCGGCTTCGCCAACGGCGTCGCCCTGCCGCCCGACGAGGCCTTCGTCGTCGTCTGCGAGACGATGAGGTAGTAACAAGCTCAACTTCTCATCTGGGAAATGACACGTAGTCTACTGATTGCAGTGACCTGAGTAACATTTTAAGGTTACGAGTGCAAATCTCCTTAGGAGCGAATTTCAGATTGGATTGTTTGTGGGGCTAAGTTCCTAATTTAAATGGCTGCATATATCTGATTGGATGTAGAATCTGGGTAGAAAATACCCTTCTCTAAAATAATAATAAAAAAAAGTAATTTTACGGTTCATAAAGATGTACCATTAGGTAAAAAAAATTAGTATAAAATTTAGTATCTCATAGTATCTAGATACAAAGAGATATCAAATTAAAATAGAAAAAAATAGTATCTCATGTATCTCCTTAAGAACGGTAAAATTGCTCATAAAAAAAAAGAGACTGTTCACTCTATCGTCAAGTGACCATGAAGTGATATTGTCAAGTGCAGGTTCAGATGCTTGAGAGTGTGGCTGAAAGGGGAGAAGGCTGGGGAGGCAGAGATCTTCGTGGACAACCTGCCGGGGAATCCAGACAACATTCGGCTGGGTTCAGATGGTCACTTCTGGATTGCCCTTCTCCAGGTCTCTGCTCTCTAACCTTTCTGCTGCCATAAGCATCTACACAACATTTTCAGTGCTCAAACTTCACAATTTTCTGTGCTCAACTGCAGGTGAGGTCTCCATGGCTGGACCTGATCTCTCGCTGGAGCTTGACGAGGAGGGTCATCGCGTCGTTCCCGGCGCTCGTCGAGAGGACCAAGGCGACGCTGAAGGGAGCAGTGGTGGCTCAGGTGTCGTTGAACGGCGAGATCGTGAGGGTTCTTGGTGATTCTGAAGGGAAGGTGATCAACATGGTCACTTCGGTGACAGAGTTCAACGGAGATCTCTTCCTCGGCAGCCTCGCGACCAACTTCATAGGGAAATTATCTTTGGCTAAGGTTGCACAGGATCAGGAGGATGCAGTTTCTTCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026125