BGIOSGA026897
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Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
BGIOSGA026897 |
|---|---|
| Description |
Probable 4-coumarate--CoA ligase 5 |
| Definition |
Oryza sativa Indica Group BGIOSGA026897, complete gene. |
| LocusTag |
4CL5 |
| Ensembl Transcript ID |
BGIOSGA026897-TA |
| Ensembl Protein ID |
BGIOSGA026897-PA |
| Length |
2062 |
| Source |
Oryza sativa Indica Group ORGANISM Oryza sativa Indica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 8:23226099..23228160 |
| Sequence Coding Region |
23227180..23228160,23226886..23227084,23226542..23226755,23226322..23226424,23226099..23226221 |
| Genome Context |
<gbrowseImage1> name=IndicaChromosome08:23226099..23228160 source=RiceIndica08 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=IndicaChromosome08:23226099..23228160 source=RiceIndica08 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>ATGGGCTCGTTGCCGGAGCAGTTCGTCTTCCGCTCGAGGCTCCCCGACATCGCCATCCCGGACCATCTCCCGCTGCACGACTACGTGTTCGAGCGCCTCGCCGACCGCCGTGACCGGGCATGCCTCATCGATGGCGCCACGGGGGAGACGCTCTCGTTCGGCGACGTCGACGCGCTGTCGCGCCGCGTGGCGGCTGGGTTGAGCTCGATTGGTGTTTGCCATGGTAGTACCGTGATGCTGCTGCTGCCGAACTCCGTCGAGTTCGCGGTGGCGTTCCTCGCGTCGTCACGGCTCGGGGCGGTCACCACCACGGCCAACCCGCTGCACACCCCGCCGGAGATCGCCAAGCAGGTGGCGGCGTCCGGCGCGACGGTCGTGGTCACCGAGCCGGCGTTCGTCGCCAAGGTGAGCGGCCTCGCGGGCGTGACCGTCGTCGCCACCGGGGACGGCGCCGAGGGGTGCGCGTCGTTCGCGGGCCTCGCCGCCGCCGACGGCTCGGCGCTGCCGGAGGTCGCCATCGACGTCGCCAGCGACGCCGTGGCGCTGCCCTACTCGTCGGGCACGACGGGGCTCCCCAAGGGGGTGATGCTGTCGCACCGCGGGCTGGTGACCAGCGTGGCGCAGCTCGTCGACGGCGAGAACCCGAACCTCCACCTCCGGGAGGACGACGTGGTGCTCTGCGTGCTCCCCATGTTCCACGTCTACTCCCTCCACTCCATCCTCCTCTGCGGGATGCGCGCCGGCGCCGCCATCGTGGTCATGAAGCGGTTCGACACCGTCAAGATGCTGCAGCTGGTGGAGCGCCACGGCGTCACCATCGCGCCGCTCGTCCCTCCCATCGTCGTCGAGATGGCCAAGAGCGACGCCCTCGACCGCCACGACCTCTCCTCCGTCCGCATGGTCATCTCCGGCGCCGCCCCCATGGGCAAGGAGCTTCAGGACATCGTCCACGCCAAGCTCCCCAACGCCGTCCTCGGACAGGGGTACGGGATGACGGAGGCAGGGCCGGTGCTGTCAATGTGCATGGCGTTCGCGAAGGAGCCGACGCCGGTGAAGTCCGGCGCGTGCGGCACGGTGGTGCGGAACGCCGAGCTGAAGATCGTCGACCCGGACACCGGCTTGTCACTCCCGCGCAACCAGCCGGGGGAGATTTGCATCAGGGGAAAACAAATCATGAAAGGATACCTGAACAACCCGGAGGCGACCGAGAAGACGATCGACAAGGACGGGTGGCTGCACACTGGCGACATCGGCTTCGTCGACGACGACGACGAGATCTTCATCGTGGACCGGCTCAAGGAGCTCATCAAGTACAAGGGCTTCCAGGTCGCCCCCGCCGAGCTCGAGGCCATGCTCATCGCCCACGCCGCCGTCGCCGATGCCGCCGTCGTCCCAATGAAGGACGATTCCTGCGGCGAGATCCCAGTGGCGTTCGTCGTCGCACGCGACGGCTCGGGGATCACCGAGGACGAGATCAAGCAGTACGTCGCAAAGCAGGTGGTGTTCTACAAGAGGCTGCACAAGATCTTCTTCGTGGACGCAATCCCGAAGGCGCCGTCGGGGAAGATTTTGAGGAAGGATCTGAGAGCAAAGTTGGCTGCTGGAATTCCGGCGTGCTGA</cdnaseq> |
| Protein Sequence |
<aaseq>MGSLPEQFVFRSRLPDIAIPDHLPLHDYVFERLADRRDRACLIDGATGETLSFGDVDALSRRVAAGLSSIGVCHGSTVMLLLPNSVEFAVAFLASSRLGAVTTTANPLHTPPEIAKQVAASGATVVVTEPAFVAKVSGLAGVTVVATGDGAEGCASFAGLAAADGSALPEVAIDVASDAVALPYSSGTTGLPKGVMLSHRGLVTSVAQLVDGENPNLHLREDDVVLCVLPMFHVYSLHSILLCGMRAGAAIVVMKRFDTVKMLQLVERHGVTIAPLVPPIVVEMAKSDALDRHDLSSVRMVISGAAPMGKELQDIVHAKLPNAVLGQGYGMTEAGPVLSMCMAFAKEPTPVKSGACGTVVRNAELKIVDPDTGLSLPRNQPGEICIRGKQIMKGYLNNPEATEKTIDKDGWLHTGDIGFVDDDDEIFIVDRLKELIKYKGFQVAPAELEAMLIAHAAVADAAVVPMKDDSCGEIPVAFVVARDGSGITEDEIKQYVAKQVVFYKRLHKIFFVDAIPKAPSGKILRKDLRAKLAAGIPAC</aaseq> |
| Gene Sequence |
<dnaseqindica>1..981#1077..1275#1406..1619#1737..1839#1940..2062#ATGGGCTCGTTGCCGGAGCAGTTCGTCTTCCGCTCGAGGCTCCCCGACATCGCCATCCCGGACCATCTCCCGCTGCACGACTACGTGTTCGAGCGCCTCGCCGACCGCCGTGACCGGGCATGCCTCATCGATGGCGCCACGGGGGAGACGCTCTCGTTCGGCGACGTCGACGCGCTGTCGCGCCGCGTGGCGGCTGGGTTGAGCTCGATTGGTGTTTGCCATGGTAGTACCGTGATGCTGCTGCTGCCGAACTCCGTCGAGTTCGCGGTGGCGTTCCTCGCGTCGTCACGGCTCGGGGCGGTCACCACCACGGCCAACCCGCTGCACACCCCGCCGGAGATCGCCAAGCAGGTGGCGGCGTCCGGCGCGACGGTCGTGGTCACCGAGCCGGCGTTCGTCGCCAAGGTGAGCGGCCTCGCGGGCGTGACCGTCGTCGCCACCGGGGACGGCGCCGAGGGGTGCGCGTCGTTCGCGGGCCTCGCCGCCGCCGACGGCTCGGCGCTGCCGGAGGTCGCCATCGACGTCGCCAGCGACGCCGTGGCGCTGCCCTACTCGTCGGGCACGACGGGGCTCCCCAAGGGGGTGATGCTGTCGCACCGCGGGCTGGTGACCAGCGTGGCGCAGCTCGTCGACGGCGAGAACCCGAACCTCCACCTCCGGGAGGACGACGTGGTGCTCTGCGTGCTCCCCATGTTCCACGTCTACTCCCTCCACTCCATCCTCCTCTGCGGGATGCGCGCCGGCGCCGCCATCGTGGTCATGAAGCGGTTCGACACCGTCAAGATGCTGCAGCTGGTGGAGCGCCACGGCGTCACCATCGCGCCGCTCGTCCCTCCCATCGTCGTCGAGATGGCCAAGAGCGACGCCCTCGACCGCCACGACCTCTCCTCCGTCCGCATGGTCATCTCCGGCGCCGCCCCCATGGGCAAGGAGCTTCAGGACATCGTCCACGCCAAGCTCCCCAACGCCGTCCTCGGACAGGTATAACCCAAACTAGACGAACACAAGGACCAAATCAAACAATAAAAACAACAACAACATCCAAGTGGAAATTTGATGTGAATTTGATCGAGCAGGGGTACGGGATGACGGAGGCAGGGCCGGTGCTGTCAATGTGCATGGCGTTCGCGAAGGAGCCGACGCCGGTGAAGTCCGGCGCGTGCGGCACGGTGGTGCGGAACGCCGAGCTGAAGATCGTCGACCCGGACACCGGCTTGTCACTCCCGCGCAACCAGCCGGGGGAGATTTGCATCAGGGGAAAACAAATCATGAAAGGTACACACTGCCCAAATTCATTCACAATTTTTTGAGTTTACTTTCATTCGAAAAAAAACGGAGCAAATTTTGACTGGGTCGAAGCTGACTCGTCGCCGGTTCTTGGCGCGTTGCGTGTGCGTACGTGCAGGATACCTGAACAACCCGGAGGCGACCGAGAAGACGATCGACAAGGACGGGTGGCTGCACACTGGCGACATCGGCTTCGTCGACGACGACGACGAGATCTTCATCGTGGACCGGCTCAAGGAGCTCATCAAGTACAAGGGCTTCCAGGTCGCCCCCGCCGAGCTCGAGGCCATGCTCATCGCCCACGCCGCCGTCGCCGATGCCGCCGTCGTCCCGTAAGTATCCGGACTCCGGCATGATCAACCTCGCCACGCGCGCATTTGGCATTCGCAATTTCAGGCTCTGAACATCGGCTTGACGACTGAATGTCTGAATTTTTCTCAACGATGCAGAATGAAGGACGATTCCTGCGGCGAGATCCCAGTGGCGTTCGTCGTCGCACGCGACGGCTCGGGGATCACCGAGGACGAGATCAAGCAGTACGTCGCAAAGCAGGTGAGAGATCATGATCGATCAAGAATATTGCTCCTGCAAACTAATTATTAACCTTAGCATCGAGGTGAACTGAACGCTGGGTTTATCTCTGAATAATCAGGTGGTGTTCTACAAGAGGCTGCACAAGATCTTCTTCGTGGACGCAATCCCGAAGGCGCCGTCGGGGAAGATTTTGAGGAAGGATCTGAGAGCAAAGTTGGCTGCTGGAATTCCGGCGTGCTGA</dnaseqindica> |
| External Link(s) |
