BGIOSGA026860

From RiceWiki
Revision as of 17:04, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

BGIOSGA026860

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026860, complete gene.

LocusTag

OsI_29494

Ensembl Transcript ID

BGIOSGA026860-TA

Ensembl Protein ID

BGIOSGA026860-PA

Length

7627

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 8

Location

Chromosome 8:24058522..24066148

Sequence Coding Region

24065318..24066148,24063777..24063866,24062990..24063142,24062601..24062897,24061487..24061559
,24061325..24061353,24059401..24059799,24058522..24058650

Genome Context

<gbrowseImage1> name=IndicaChromosome08:24058522..24066148 source=RiceIndica08 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome08:24058522..24066148 source=RiceIndica08 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGCTCGCCACCTCGCCGCAAGCTGCGGCCGCCGTCGCCGCCGGGGTCGGCGGCGCAGCCGAGCCTCGACTGCCTCCCGTCGGAGATCCTGGAGAACATCGTCGCCCGCCTCGGCATCCGTGAGGCCGTCCGCACCTCGGCGGTCTCCGGCGCATGGCGCCGCCGCTGGGAGACCTCCCCGGGGCTCAGCTTCGAATGGGACCGCGGCGAGGTTGACCCCGCCATCGTCGCCACCGTCCTCGCGCGGTACTCGCGCCCCGTCGCCTCCTTCCGCTCCGGGTGGGTCGAGAGGGAGCACTCCGCCGTCACGGATGAGTGGCTCGTCCTCCTCGCCGGAAGGAGCGTCGAGTCCCTCACCCTTGGCTTCGCGGAGTTCGACGATAGGCGGTTCCACACCATCCACTCCGCCATGTTCTCCTGCCGCGAGCTCACCGAGCTTTTACCTCGAGAACTGCCGCCTCCCGGCCGCACCCTCGGGCTTCTTAGGTTTCCCAAATCTAACCACGCTAAGTCTCTCACCATGGTTAATCTTCCAGAGCATGGGGAGAGTACCTTGGAGGCGATGATCTCCTTGTCTCTGTTGCTTGAGTGGCTGGATCTTAGGAGTGTTTGTACTGATGGCAACCAGATGGATGAGTGGGTGATTCGGGCGCCGAATCTCAAGCATTTGACTATTGAATCAGATTACGATTATTTATGGAGGGTAGAGGAGCTCCCTTCTCTCCAGACGGCAACTGTCAAGGTTGATGATGATTCTACTGATCGTGATTTTGTTCAGTTACTCACATGTTTTGCCCAAGTCAGCATGCTTGAGCTTCATTTGCTGGCCCCAAAACAGATGCAAAAGGTAGCAATTTTTACTATCAAATCTCGTCTTGTAGCACTTCTCCTAGGCCAATGCCTCTTCAGGAATTTTGCAACTGAGGATAATGCTCTAGATGGACTTCCATGTTCTTTGGAGAAACTGAAGAGCTTAACACTTCATGCAAACTTCTGCAGTGTGTCTAGCATTTTATGTATATTTTCTTTACTCATGAGGTGCCCCAACATTGGAGTTCTGGACATTGAGATTATGGGAAGTGAGTTTCCTCAGAATGATGAGATAGATGCAGAATTTTTCAATACACTGGAAACCAATGATCTGTTCACTAATCTAGATGACATAACCTTGAGGAATGCCCCATGCTTGTCAAATGATATGCACTTTATTGAGTTTGTTCTGTCAAGAGTAAGGCTACTTAGTAAATTTTGGGTTTTTCGAGATGATAGTAATTCATTGTCAAAGCCTAGTGAAGAAGCAGTTATTGAGATAGCAAAATATAGAAGAGCTTCACCAAAATCCAGAATCTTCTTTAGGAGCATGGAAGTTATCACCTCTTATTTCCCTGATTCCCTCTTTCTGATACTCACACAGTGGTCTGTTGCACTGCAAAAGGCTCATAACATCTTTTACATGGACCGTGGTCAACTCACCCAGCTCGAACTTGTAGACTGCTACATCCCAGGGTTGCCAACCTGCTTCGCGGGGTTCCCAAATCTAACCAGTCTAAGATTATCAGATGTTGGCTTCCTAGATGGAGCAAAAGGATTGGAGATATTGCTCGCTAGATCGCCATTGCTAAAGAGCCTTTCACTCCTGATGTTGCTGTTTCCTGCTAAAAACGGGGTGTATCACCAGTGGGTTATTCAGGCTCCAAATCTCCAGAACTTTTTTATTACTGGACTGTATGACGATGGTTGGCAGATCGGTGATCTCACGTTCCTTGAGGAAGCAACAGTCGATTGGCCATTATACTCATATGACCGTGATTTCGTCAAGCTTATTACAGGGTTGTCTCAAGCAAGGGAGCTCGACTTTGCAATGCCGCCAAACAAAATGTTTCATCTTCATGGGGGCAGGGCATTTCCAAATCTTGAGCATAGTAACATCTCTCACACCTCTAAAGGCAATCATCTCATACAGGGATTTAGTAGTGTACTTTTTGTTAGTGGATAG</cdnaseq>

Protein Sequence

<aaseq>MEGSPPRRKLRPPSPPGSAAQPSLDCLPSEILENIVARLGIREAVRTSAVSGAWRRRWETSPGLSFEWDRGEVDPAIVATVLARYSRPVASFRSGWVEREHSAVTDEWLVLLAGRSVESLTLGFAEFDDRRFHTIHSAMFSCRELTELLPRELPPPGRTLGLLRFPKSNHAKSLTMVNLPEHGESTLEAMISLSLLLEWLDLRSVCTDGNQMDEWVIRAPNLKHLTIESDYDYLWRVEELPSLQTATVKVDDDSTDRDFVQLLTCFAQVSMLELHLLAPKQMQKVAIFTIKSRLVALLLGQCLFRNFATEDNALDGLPCSLEKLKSLTLHANFCSVSSILCIFSLLMRCPNIGVLDIEIMGSEFPQNDEIDAEFFNTLETNDLFTNLDDITLRNAPCLSNDMHFIEFVLSRVRLLSKFWVFRDDSNSLSKPSEEAVIEIAKYRRASPKSRIFFRSMEVITSYFPDSLFLILTQWSVALQKAHNIFYMDRGQLTQLELVDCYIPGLPTCFAGFPNLTSLRLSDVGFLDGAKGLEILLARSPLLKSLSLLMLLFPAKNGVYHQWVIQAPNLQNFFITGLYDDGWQIGDLTFLEEATVDWPLYSYDRDFVKLITGLSQARELDFAMPPNKMFHLHGGRAFPNLEHSNISHTSKGNHLIQGFSSVLFVSG</aaseq>

Gene Sequence

<dnaseqindica>1..831#2283..2372#3007..3159#3252..3548#4590..4662#4796..4824#6350..6748#7499..7627#ATGGAGGGCTCGCCACCTCGCCGCAAGCTGCGGCCGCCGTCGCCGCCGGGGTCGGCGGCGCAGCCGAGCCTCGACTGCCTCCCGTCGGAGATCCTGGAGAACATCGTCGCCCGCCTCGGCATCCGTGAGGCCGTCCGCACCTCGGCGGTCTCCGGCGCATGGCGCCGCCGCTGGGAGACCTCCCCGGGGCTCAGCTTCGAATGGGACCGCGGCGAGGTTGACCCCGCCATCGTCGCCACCGTCCTCGCGCGGTACTCGCGCCCCGTCGCCTCCTTCCGCTCCGGGTGGGTCGAGAGGGAGCACTCCGCCGTCACGGATGAGTGGCTCGTCCTCCTCGCCGGAAGGAGCGTCGAGTCCCTCACCCTTGGCTTCGCGGAGTTCGACGATAGGCGGTTCCACACCATCCACTCCGCCATGTTCTCCTGCCGCGAGCTCACCGAGCTTTTACCTCGAGAACTGCCGCCTCCCGGCCGCACCCTCGGGCTTCTTAGGTTTCCCAAATCTAACCACGCTAAGTCTCTCACCATGGTTAATCTTCCAGAGCATGGGGAGAGTACCTTGGAGGCGATGATCTCCTTGTCTCTGTTGCTTGAGTGGCTGGATCTTAGGAGTGTTTGTACTGATGGCAACCAGATGGATGAGTGGGTGATTCGGGCGCCGAATCTCAAGCATTTGACTATTGAATCAGATTACGATTATTTATGGAGGGTAGAGGAGCTCCCTTCTCTCCAGACGGCAACTGTCAAGGTTGATGATGATTCTACTGATCGTGATTTTGTTCAGTTACTCACATGTTTTGCCCAAGTCAGCATGCTTGAGCTTCATTTGCTGGTAAATTGGTTTACAGAACCCAACTGTTTTTTTTTTCTTCTTCCATCATTGTCATCTTGAACATTTGTTGGGTTTTCCTTCTAAATCTCTAGCTATGGACCATTTGTTATGTTTTTCCTTCTAACTCTCTAGCTATGAACCATTCAGTTGTCAAGTTCTATTTGATTCAAAACTGAGGCCATCTACCTTATGTTAGTGATAATTTCTTCTGTCATTTATTGAAATGTACCACCAGAAGCAACCCAAATATGCGACACTAGGATCATGTCATTTTTTCTGTGATATTTTCTTTCAGTGGCCTATAAGAAAGGAAATGTTTTATATTTTTCAGGCTGTTGGATCCAATTTGTTTTGGATTTTCCCCACTTATGTTCAGATTATGTTTTTGGATTTGCAATGTGTAGTTTTGTTCTGAATTGGGATGCTTACGACTGGTATCTAAGCTATCTTTAGTGAATAACCCACCTAGACCTTTCTTCTTAGTGACATATCACTTGAAGTGTATTTTTACTGAATTTCCGTAATTACTGTCACCGATCTATGCCAGTTGACTATCCACAGTAGCAGACCTTCTCTTGTGGCATGCCATGGCATTGGCCTAGCTAGGCCACCGGCAAAGCAAGTAGGTGTTTGTCCATTGGTCGTTAGCATTTTTATTTTAGATGATAATCACATGATTAATTGGTAATCTGATTTGGTACAAGTTTATGGGTTTAATTAAATGAATGTAAGTGTAACGGTGGTTTACTACTTCGACTCTACTTTCAGAAAGAACTGTTGATTGTCCTGACCATCCAAGCTCTAAAACATAGGCACGAAAGGCAGCAGCATGTAGAAAAAAAGTTCAATATGAGTGACAACGTATGTAAAATAGAGAAAATTAAAATTTCGTTTATAAAAATCACATGACAAATGTAGAATTATAGTGGTAATTTTATCTTTTAATGGCAGTTGTAGTATGTAGTTTGTGTATAATTATATTTAATTCATTAATTAAATGTATAATAGTATAATACACTAGTCGTATCAATCGACCGCCATAGCTAAATTTTAGTGCTGGGTCCGCCACTGGTAATCCAGTCTCTGAAGAATGATCCTTGCTTCTGCTTTTGGTTCTATTACAGTCCTACTCCAGTTCTTTCTGTGATTCTCTTGCCCATTGATCTTAAACATGTCCTTGGAGTCGTGCTCCCCTGACTTGCTAATACCCTGCTCTTGCAAGTTCCTCAGTTTTAGATGAAATATTTTTTGATTTACATAAAGCCCAGTAGGAACTGAGTTTTACAAGCACAGTTAAGGACACTTAACTGCTGGGGTTACCAGCTACTTATCTAGGTTCGAAAACAACCATTTACATCACTTTTTGTCGGGCTTGCAGCAAGACAAACCAGGAAACCACATCAAAAGACAATACCTGATGATTAGCACCTACAACTCTGACTAATAAACAGGCCCCAAAACAGATGCAAAAGGTAGCAATTTTTACTATCAAATCTCGTCTTGTAGCACTTCTCCTAGGCCAATGCCTCTTCAGGAATTTTGTAAGTTCTCCACACAACCCTTGAAGCTTGCTTGGCTCCTCTCTTTGTTAAGTCATCCACCTCCGTATAAATGAAATTAATTTGTAGACAATTGTCAAGGAGTCTTGCAAGACTACATGGCTGTCTATTCACATTGGGCAATTTCTTGAGCATTCTTGTAATTCTTGCACAGGGCAAAGAATAAAATTCTTCCTATCTTGATTCTATGGGTCTGTTTTACTTGGAGGAAAGTTCACTAGGAGTGTTAGGGGAGCAGGGAGCAAGGAGGGTTGTATGCGTGTCTTGTGTGAGATTGTTAGAGCAGAAGAAAGTGGAATAGAAGACCAAAATGAGTTGTTGGGTTCGGAGTGGTACCACATACCAGATGTGAGGCTGATGAGGGCAAATCTGTGCAAGAGTGCTAATATTTCTAACTAAAGTTCTTCCAAATGAGTTCTAATTGTCATTAAGCAAGTTAAATTCAAGTTATTTTGTTAGTCTGTGTCATCAGTGCATTAGTTGAAAATAATGTTATTATGTACGATTCTGTTCAAATAAGACAGACTCTAAGAAAAAGAGCAAACTTCTTAAAAAAAATATTGTTTTTTCTTGAGCCATCTTCTCATATATAGTGTAACTGTTGTATTTGTTTCAGGCAACTGAGGATAATGCTCTAGATGGACTTCCATGTTCTTTGGAGAAACTGAAGAGCTTAACACTTCATGCAAACTTCTGCAGTGTGTCTAGCATTTTATGTATATTTTCTTTACTCATGAGGTGCCCCAACATTGGAGTTCTGGACATTGAGGTGATATTACATCAGTATTTTTCCACTTTAATATTGTCATTCGAAAATGTTTTTACAGGAAGTATTTAAAGTATTTTTTTACATTTTGGCAGATTATGGGAAGTGAGTTTCCTCAGAATGATGAGATAGATGCAGAATTTTTCAATACACTGGAAACCAATGATCTGTTCACTAATCTAGATGACATAACCTTGAGGAATGCCCCATGCTTGTCAAATGATATGCACTTTATTGAGTTTGTTCTGTCAAGAGTAAGGCTACTTAGTAAATTTTGGGTTTTTCGAGATGATAGTAATTCATTGTCAAAGCCTAGTGAAGAAGCAGTTATTGAGATAGCAAAATATAGAAGAGCTTCACCAAAATCCAGAATCTTCTTTAGGAGCATGGAAGTAAGTGACTATAACCTGTAAAATTATTTATTCTGTTCTTTCCTTCTATCTCAATTGCATCCATATTGTATGACAAACCAACTGAAAATTGTGTTTTTGCTGTTTGAAATTGGAATGGGAATTTAATGAAATAGGCAACAATTTAGCTGCTAAGATGCATTTAACAAGCATATATGAACCTTTTTACACCGTTGGAGTCAAGGTCTACATAAAATATGTTTGTAGCTTTAGTACGATTATGATGTGATGCTGGAATAGCTACCCTCCAACGGATTTTTTCCCGTTGTGTATGCAGAAGTCCATCACAGCTTCAAAGTTTGCTAATTTAATTTCCTTCCCTTGTCAAACTATCTTATGGTTTTTAATTCTGACCATGGTCAGATCAGCTGATGTTTTTAGAACATAACGTGGCATTACCTTTGGAGAACATAAGGTATATACCATCCATGTATCGTCCTTTGAATATATATCACCAGAAGAGTTTACTTCTCTCTAATATTCTCTTGTTATATAATGTTACATATGCATTAAACTACAAATATCCGTTAGTTACAGTAGAAGCAATATATTACTTGGCTTGTTTGGGTTGAACTGCTGGCTACTTTGTACAGTGTTTGGTTTTAACAAAATCCACACAAGATAGTTAAAACCAAAATGTCAGCATAATAATCTCTTCTCATTCATTCTCTTGTGAGGTACCATTTTGTATTTTTGAAACAGCCCGCACGAGTCAGTGCGAAGTTTGCTTGTGAACACAAGTTTTTTCTTTGTGAGGTACCATTCAAATACTTCTCAAAGCATTATCAGGCAAACAGTTGTCTAACTTACTAGAAAAGATTGTTTGCGAAGTGCTTTGTATTGTCAACTATGTTGCAAGTTTGGGTATGCAGATAATGCAACCTATCATGTTTGATCTAGAAATACCCAACCAAATTGATTTTGGGATAGAAATACTCAACCTTGCAAAATGCCTTGGTAAAATGAACTTCTGCACTGGAAAGACTCAAATATACCTATTTATTTTTGTCTATTCAAATTCAGGTTATCACCTCTTATTTCCCTGATTCCCTCTTTCTGATACTCACACAGTGGTCTGTTGCACTGCAAAAGGCTCGTATGTACCAATTTACTGTTCATCACCAATATTCCAAAAAATGTTTAGAAAATTATGGTCTGATTATTTGTTTTTCTTTGTACTGGACAGGATTATTACATTTGAGTGACGAGCACTATTGATGTGGATCTAGATAACATCTTTTACATGGACCGTGGTCAAGTACACTTTCCATATTACTTTCTGAGAGCCGCTGGGAAACCACAGCTTAATTGTTAAGTGTTCATTACTGGACATAAATCCGGTAATATTAGTTGTGGGTGTCAAATTTGCATGAAGTCTTGTAATACCAATCTTCCTGGAAGATCAAACAATGTTTACAGTAATTTTCGAGTGATTATCCTAACACCAAATAGTTTTCAAGACATTTTAATCATGGTTGGTTCTTCTACTGTGTCGTGTCGCCCTACCGAGGTGCGATTTTGATTTTTGACCACAATTTTTAAATTTGTTAATGATGATGATGTTCTTTGGGGCATATGCTTCTGTTGGAGTTTTTGTCTTGGGCACAAAAGACAAAATGGTCCCTCCAACGCTTGCCTATTGTATCAGGGTGCAATCAAACCGATGTATCAACGGTATTTACATTTGTTCTCAAACCAGCTGATCTCGAATAGTATCTGTTCAGAATTTTGTGCTCCAACAGTTTGAACTAACTGAAATCGAGCTGGATGTGCTCCAAACAAAATCAGGCGCGAGATTCGAGGGAGTTGCTGGGCCGAGATTGGCCTCAATTGCTGTAAGCCCACTTCCCTTCATGGGCCTCACAGGCGTCAGGCAGACCAGCAGAATGAGAGCAAGTTTAACACTATAGCCAACTACTGGCTCCAAATCATCTATAGGCAATCTAATAACCCATTCATACAATAGTTAACTATTAAAAATATATTACATCATTAATACCCGGTCCCATCTCTCATACACACATAATGTCTTGGAGTCCGTGTTGCAGCCGGCTATAAATCTGCAGCCCGCTTTCTTCTCTCTCTTCTCTTTTTTTTTCTTTTATATCACTGGCTCCCTCCAGCTCGTAGTGCTCGCTGCCGATGTCGAGCTCCTAATCGCTGGCGGCCGAAACGCCGGCCGCCTCCGCGGCCCGCATCGCCGGCCGCGACCTCAATCGTCCGTCGAGGTATTGCTTCCTTTCTGCTCCTCGCAGGTGATTAACGCTTGCCGTCCCTAAACCCTAGCTCGGATTTTGGCGAACAGGAATCCCGTATTGCTCGATCGAATAATCGGGATGGTAATGACGCCGTCGCCTGGCTGCAAGCTGTGGCCGTCGCAGGGCGATGCAGGAACGGCGGCGGCGGCGGCCCTGGACTCCCTCCCACCGGAGATGCTCGCCGACGTCATCTCCCGTCTCCCCATCCGCGAGACCGTCCGCACTTCGGCGCTCTCCCACGTGTCGCGCAGCTGCTGGGAGTCCGTCCCCTACCTCACCTTCTGTTGGCCACGCCGCACACCCCCCGGCGCCATCAGCACCGCCCTCCGGCGCTACTCCGGCCTCGTCCGCAACTTTACCAACTTGTATATCGGGGAGGAGGAGGAGGAGGAGGCGCCGTTCCGCTACTCCGACCGCTGGCTGCTCCTCCTCGCCGGGAAGGGGGTCCAATCCCTCTTCCTTGCTTTCTGACGGTCGGACGAGGAGATCCCTATGCTGCATTCCTCTATCTTCTCTTGCTGCGAGCTCACCCAGCTCGAACTTGTAGACTGCTACATCCCAGGGTTGCCAACCTGCTTCGCGGGGTTCCCAAATCTAACCAGTCTAAGATTATCAGATGTTGGCTTCCTAGATGGAGCAAAAGGATTGGAGATATTGCTCGCTAGATCGCCATTGCTAAAGAGCCTTTCACTCCTGATGTTGCTGTTTCCTGCTAAAAACGGGGTGTATCACCAGTGGGTTATTCAGGCTCCAAATCTCCAGAACTTTTTTATTACTGGACTGTATGACGATGGTTGGCAGATCGGTGATCTCACGTTCCTTGAGGAAGCAACAGTCGATTGGCCATTATACTCATATGACCGTGATTTCGTCAAGCTTATTACAGGGTTGTCTCAAGCAAGGGAGCTCGACTTTGCAATGCCGGTAAAATTGTTCTACTCAACTTGTTTTTTCACTTGTACATTATCTGCGTACAGAGAAGTTATTTTTTTAGAGAGGAGGCCAGAAGGCCTTGCTTCTATTGAAAGCAGCATTGGTAACAGAGTTAATATGGGGGATGCCCATTTTACATACCGATCAACACAGAAACAAAACAACATTCAGTTCTGAACCCCAAGAGGAGAAACAACAGAAACGAAACAACTCTCAGACAAAAAACACTAAGCAGCGCACTACAGCAGCAGAATGGACAAAACGACATTAGCCTAGACCAGTTCTTTGCGCCCCCAGGCTTGAAATCATCCCTTTCAGCTTCACAGCAATGTGATCCATCAGAGCAACTTCCTCAGAGCGACATAAAGCCTTCCACTGCAGCAAAAAGGAAACAATTTGGAATGGCAAAATCAGCAGAGAATACACAATTTTGTTTCTAAAAATCATGTTATTCCTGGTTGTCCAGAGCACCCAGGAAACTGCAACAAGTAAAGCTGAAAACACTCTATCCTTAGCTTTATTATTCATTTCATTCAGAAGAAACAAATCCTCAAAATTCCTAGGAGCTAGGTGCCAGCCAAAAGAATCTCTACAGACACACCACACAAATGAAGCCATAGGGCAGGTAAAGAGAATATGAGAAGTGGACTCTATCTCCCCATAAAGCTGGCAATATTCAGACCCTGACCAGTTTTTCATTTTCAGTTGTTCAGCTGACTGGATTCTATTCTTCCTCGCAAGCCAAACAAAATGTTTCATCTTCATGGGGGCAGGGCATTTCCAAATCTTGAGCATAGTAACATCTCTCACACCTCTAAAGGCAATCATCTCATACAGGGATTTAGTAGTGTACTTTTTGTTAGTGGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026860