Os01g0179800
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0179800 |
|---|---|
| Description |
TMS membrane protein/tumour differentially expressed protein family protein |
| Version |
NM_001048738.1 GI:115434889 GeneID:4325348 |
| Length |
5727 bp |
| Definition |
Oryza sativa Japonica Group Os01g0179800, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:4166514..4172240 |
| Sequence Coding Region |
4166867..4166934,4167302..4167375,4167509..4167648,4167731..4167802,4167915..4167984 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:4166514..4172240 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:4166514..4172240 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgacgctgggcagcggcggcatggcggcggaggagggcggcggcaatggcgaggcggcggcgaggggggagaggtgcgtggtggtggcggtggaggagacgtgctgcgcgtgcgcgcagctcgtggtcgggccgccgaacccgatgatggcgaggtacgtgtacgccttcgtgttcctggcgaccaacctgctcgcctggacgctccgcgacttcggccaccccgtcctcgccgagctccggcgactccgcggcagctgccagggcgccggctactgcctcggcgccgagggcgtcctccgcgtcagcctcggctgcttcctgttcttcttcgtgatgttcttgtcgacggtgaggacgaggaagacgcacgatcgccggaattcatggcactccgagtggtggccggcgaagatcgtgctgtggatgggcttcaccgtcgtccccttcttcctcccctcgcctctcatccagctctacgggaagatcgcgcatttcggagcaggggcgtttctggtgatccagctcgtcagtgtcacccggttcatcacctggctgaacgactgctgccggtcagagaccaacctgaagagatgccatatgcaggtgcaggtggtgtcgatcgcggcgtacgtgggctccatcctgggcgtggtgctcatgtacgtgtggtacgcgccgcggccgtcctgcaagctcaacatcctcttcatcaccgtcaccctcgtcctcgtccagatcatgaccggcgtctcgctcagctccaaggtgaaggctggctacctggcgcctgggctgatgggggtctacatcgtgttcctctgctggacagcgatcaggagtgagcctcacacagagatttgcaacaagaaagccgaggttgcaacgagtgcagattgggttaacatcgcgagcttcgtgatcgcggtgatcgtcatcgtcacggcgacattcgctacggggatcgattccaagtgcctccagttcaagaaggccgagagcgagcagcccgaggacgacgacatcccgtacgggttcggcttcttccacttcgtgttcgccatgggcgccatgtacttcgctatgctcttcgtcggctggaacgccaatcaaaccatggagaagtggacgatcgatgtcgggtgggcgagcacctgggtccgggttgtcaacgaatggctcgcggcgatcgtgtatatatggatggtgattgctccaattgtctggaagggagggcaggtcggctcatcgccagagggcacatga</cdnaseq> |
| Protein Sequence |
<aaseq>MTLGSGGMAAEEGGGNGEAAARGERCVVVAVEETCCACAQLVVG PPNPMMARYVYAFVFLATNLLAWTLRDFGHPVLAELRRLRGSCQGAGYCLGAEGVLRV SLGCFLFFFVMFLSTVRTRKTHDRRNSWHSEWWPAKIVLWMGFTVVPFFLPSPLIQLY GKIAHFGAGAFLVIQLVSVTRFITWLNDCCRSETNLKRCHMQVQVVSIAAYVGSILGV VLMYVWYAPRPSCKLNILFITVTLVLVQIMTGVSLSSKVKAGYLAPGLMGVYIVFLCW TAIRSEPHTEICNKKAEVATSADWVNIASFVIAVIVIVTATFATGIDSKCLQFKKAES EQPEDDDIPYGFGFFHFVFAMGAMYFAMLFVGWNANQTMEKWTIDVGWASTWVRVVNE WLAAIVYIWMVIAPIVWKGGQVGSSPEGT</aaseq> |
| Gene Sequence |
<dnaseqindica>5307..5374#4866..4939#4593..4732#4439..4510#4257..4326#4056..4129#3754..3925#3265..3354#3066..3090#2809..2968#2012..2332#gccgctgaagctacctcctgctcttcttcctcttcgtcttcggcgtagctccatccctgctgttgcatgtaggattcgatcgattcgtggtggaggtaagtaatatccaatctcttcttgagtcttaatttcttggtagatttatctcttctcgatctcctgttgttaatgatgatgagttgccggatgcctgccgggacttcgcttgcaagcagctgctgtgtgcgtttcttgcgtgggagtcttccttggctgccttcctctactacatctagcagattctttctaattaagtttcgatcaatatgtgcctttgtgatttgtgatatatatttgaatggtagattaattagttattcggttgattttgctggatgcatgcatgtagctaggtgagatggatgaacaattgaacccctgtcagtttgccaagtttaattagtcaccacctgcaaatcagattgaaatagaggcgaattaaggagatagtttcattctgctcaagttctagactagaacatgaggattaattagatttttacttaacctggatgaatccaacaagaaaagattctggtattcagaactgagttcggttcaccaacgtgtagtactctacaactatagtcaaaaaaggaggaggaatattgttatgcaacgaaatgaaatgacagccagaatactgtagatcagcatattccaatattttttttgaacgaacatgtgctaattttattgaatataggagaagtaaaagttacatgtataaaaaagaaagaaccgtacaaaaggacaaaggcctaaggaattaaaagcactaggtgttttgctcccgattccaatgttttgaaacaaatagattttaacaaattatgtttgaatatttaaactattccaaaccaggatcataaattcataacagatcggcaaatagcgtgcccgagatagcaggaagatactagcaccaacgcaatcaaatatctgaaaaaaaaaattctctgattcttagctcacacgtcacacaagtagtagtactatcaatctatcatttctcaggggaatttaacccaaccagacccttttgctttccacattccacaccatctcataatatgctttcatagctttactgctttactctttttctacatacatccaaggctgctgctggtcatcagaattcagaatgagaaacatgccaatgttgtgtccttctcattcttcagtgagtgcagtccatggagctatgctgatctctttttgtccatctttaatcgtcctaatcctgctttaaagccaaccatgtcatcaagaattgatcaatgttcttttgaaaacctctttttgtttagtatgtgttctttcatgtccctgtcaagacagataaattgcacagcacaacgtgtagccttctgcatgcagtccacaggccttggaagaaaaccctttgatgatgagtgatgttgattcttgagcagatttacacacaacccaaaaatactaatgatgaaaaggagtaagattaagtaatccgttacacggctttcttttattaaacacaagctttcttttcttgcaaacattgttctactagtgacataagttagttactaattactagttagttaatggttctagtacggatttgatgtttttatgtaatggtcaatgcgagtcaaagatgatgaaagctgcaggcatttgcagtgggcttgcctacaaagcaagacacggacaaacaaaaacaaacgctctcatttgggagttcatgtctttggtgcaaaggaaacacacgcatgtacgtcgcgatcatgcgtgctcgatcggcgagctatagcgcgctaacggacaatctcatggtcacggatcgagtgtgatcgatgcgaaaaagcagcttgcgggcgcgatttctttctttgtctgcctaattcagttgatgaatcttgcatatggtcttttgtgttgtgtactgcaggagttgagcttgtcaggtgttcgttcttggggatcgatgacgctgggcagcggcggcatggcggcggaggagggcggcggcaatggcgaggcggcggcgaggggggagaggtgcgtggtggtggcggtggaggagacgtgctgcgcgtgcgcgcagctcgtggtcgggccgccgaacccgatgatggcgaggtacgtgtacgccttcgtgttcctggcgaccaacctgctcgcctggacgctccgcgacttcggccaccccgtcctcgccgagctccggcgactccgcggcagctgccagggcgccggctactgcctcggcgccgagggcgtcctccgcgtcagcctcggctgcttcgtatcctctttgcaattcaattcagatttcagtctcagattcagcttgcattttgtgaggtggatttttgtccctggagggacatcccctcgttttatacatgtcatttaaaaagttatcaaaaaaaaatttaaaagcaattgtcaagataaattaatatatgatatattttttcacaaacatgcgagttaaaatttgaccaatacaattcgaaacaaaaataacaaatttgaccgtatattaagcgttctattcatacttaaatttgttatttttgtttctatttgtataagttgatttttgaatttacatgtttgtgaagtgacatcacatattgatttatcgtactaattttttttcaaattttcaatgactttttaagtgacatacaaaaatgaggagttatcatcttaagggatgaattgagttttcctgcattttgtgaatttgatgtccttgacgacggcgatcaccagctgttcttcttcgtgatgttcttgtcgacggtgaggacgaggaagacgcacgatcgccggaattcatggcactccgagtggtggccggcgaagatcgtgctgtggatgggcttcaccgtcgtccccttcttcctcccctcgcctctcatccagctctacggtcagtgttgccattgtcaccctcctcagctcctctcacccacccgttcttgattcctctttgctcatggtgttcgtctgaattttcatattttcagggaagatcgcgcatttcggagcagggtaagccccgcatgcacattttcttttttaatataaaatactataacttccggcctcttgcatcaactagagatgcatacacgcaaccaacacacgtttttcagcacgttcagctgaatcgggtctcgttatcgacgtaaaactgatggatcatatgatgcgcaattttgacagggcgtttctggtgatccagctcgtcagtgtcacccggttcatcacctggctgaacgactgctgccggtcagagaccaacctgaagagatggtacgtctactgatcaaagccgctgatttctgttccataaaaaagcaaatccagttccctccgtcctaaattataagacctatattttttttacacggtcttcaatgatatattttgatcgttagtttattccatgctatatatttccaataaatatgaaattagcatcacatgaaagtattttaaaatatgaatgtaatgatataatatgcataatacttagcatatatatatatggttagtataattattaatcaaaagttaccgagtttaattttccttaaaaaaaaggtgcccaaatacgaaggaagtactatgatatgtcacatcaaataccgagtacagctcacctgcaatggcggcgtacgtctgacatgggttgaggtggtggtggtgcagccatatgcaggtgcaggtggtgtcgatcgcggcgtacgtgggctccatcctgggcgtggtgctcatgtacgtgtggtacgcgccgcggccgtcctgcaagctcaacatcctcttcatcaccgtcaccctcgtcctcgtccagatcatgaccggcgtctcgctcagctccaaggtcttgtgcgactaatttgcttacttctatccggatcgatcgatctcgattggaacaagtgttctcgtgtctgaatctctgaatctgaaatctgcatttgctctgttcttggattggttttgggtttcaggtgaaggctggctacctggcgcctgggctgatgggggtctacatcgtgttcctctgctggacagcgatcaggaggtgattattttctttgaaagattcattcggatctcagttctgaatttgtgatctgatcatccatggaatcgaatccattttataacacaactttggttcttttgttttttttttgggccatgaacagtgagcctcacacagagatttgcaacaagaaagccgaggttgcaacgagtgcagattgggttaacatcgcggtaatcatccaatcaactgttcagaaatgaaatttaacaaaatcgaacaatgtcatcatctgcttaactgctgctgtataaatctgaagaatgaaatgtccaacatctgcagagcttcgtgatcgcggtgatcgtcatcgtcacggcgacattcgctacggggatcgattccaagtgcctccaggtctgtcacttaactgaactcatcagtgatcagggttatgatcatatcgccattgatgctgaaattgctcgagaatctgcagttcaagaaggccgagagcgagcagcccgaggacgacgacatcccgtacgggttcggcttcttccacttcgtgttcgccatgggcgccatgtacttcgctatgctcttcgtcggctggaacgccaatcaaaccatggagaagtaataatcccagccataacaacttccactggtctttagcttaataacttgataatccattcaaggagatcaagtaaccataatccggtaactgattacaatttgttatgatccggttgattgattgcgtcaggtggacgatcgatgtcgggtgggcgagcacctgggtccgggttgtcaacgaatggctcgcggcgatcgtgtatagtaagtgaaccaaaccatgtactcctttcattccaaaatataaaaatggttagttttcaaaacttatataccataatatataagtatttatagtaccctgattgtgtgtacacacagaaatccaagcattttgaaacaatcagaattttgggaagagagcctaaccaattcaaaacttaatcaatgatacaagtgaaaataaatcttttttccgccacaaaccttaatctttactaaacaggctagaaatacttacattttaaaacggagatagtataacaatatctagccgcgcaattgcacgagctacatctgcactagctactgtatattactgacaaaactgccgttgcacctgcactttcagtatggatggtgattgctccaattgtctggaagggagggcaggtcggctcatcgccagagggcacatgacacaaggagaacaaatcagaattcagaaatggagcttcgtcagatgatgcagcgataaatacttggtcagcgacaaacacgtacgtagctgcaggctgcatgatcagggagatgtacaggatgagaagaacagttttgctttcgttgcagctgctgcagagaggcatatgcaattggcatccattgcccatacgagtgtagctagctagctaagctagatatttgtatgttcagtttcctctcctgttactggagagggcaatgcatcgaatcagcaaagcatattgtcaaatgacaaactgctgctgaacatgcaaaaggggcagcaacccttggaatatacgcagacttcc</dnaseqindica> 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