Os01g0229400

From RiceWiki
Revision as of 18:47, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0229400

Description

Small GTP-binding protein OsRac1

Version

NM_001049021.1 GI:115435455 GeneID:4325879

Length

2642 bp

Definition

Oryza sativa Japonica Group Os01g0229400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:7163716..7166357

Sequence Coding Region

7163966..7163999,7164128..7164234,7164350..7164415,7164700..7164764,7164917..7164980
,7165665..7165774,7165952..7166039,7166167..7166277

Expression

GEO Profiles:Os01g0229400

Genome Context

<gbrowseImage1> name=NC_008394:7163716..7166357 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:7163716..7166357 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagctcggcggcggcggcgacgaggttcatcaagtgcgtcaccgtgggggacggcgcggtggggaagacgtgcatgctcatctgctacacctgcaacaagttccccaccgattacatccccaccgtgttcgacaacttcagcgccaatgtctccgtggacgggagcgtcgtcaacctcggcctctgggacactgcaggtcaggaggattacagcaggttgaggcctctgagctacaggggagccgatgtgttcatcctgtccttctccctgataagcagggcgagctatgagaatgttcagaagaagtggatgccagagcttcgccggtttgcgcctggtgttcctgtagttcttgttggaaccaagttggatctccgtgaagatagggcctatcttgctgatcatccagcttcttccataataacaacggagcagggagaagaactgaggaagctaataggagcggtcgcctacatcgaatgcagctccaagacacagagaaacattaaagctgttttcgacactgccatcaaagtggtgcttcaacctccaagacataaggatgtaaccagaaagaaactccaatcaagctccaatcggccagtaaggcggtacttttgcggaagcgcttgtttcgcgtag</cdnaseq>

Protein Sequence

<aaseq>MSSAAAATRFIKCVTVGDGAVGKTCMLICYTCNKFPTDYIPTVF DNFSANVSVDGSVVNLGLWDTAGQEDYSRLRPLSYRGADVFILSFSLISRASYENVQK KWMPELRRFAPGVPVVLVGTKLDLREDRAYLADHPASSIITTEQGEELRKLIGAVAYI ECSSKTQRNIKAVFDTAIKVVLQPPRHKDVTRKKLQSSSNRPVRRYFCGSACFA</aaseq>

Gene Sequence

<dnaseqindica>2359..2392#2124..2230#1943..2008#1594..1658#1378..1441#584..693#319..406#81..191#gtgagagtgaacaagagataagctaagctagtacagcaaccagcaagaacaaagaagagtggccggagtgggcgggggagatgagctcggcggcggcggcgacgaggttcatcaagtgcgtcaccgtgggggacggcgcggtggggaagacgtgcatgctcatctgctacacctgcaacaagttccccaccgttgagtgccgcgccgccgctaatcccttcctctccgttcttgctccggcccgccgtgctggcctatcttctcttcggctcgatttggtttggtttggtttgatttgattcggtttggtttgggcaggattacatccccaccgtgttcgacaacttcagcgccaatgtctccgtggacgggagcgtcgtcaacctcggcctctgggacactgcaggtggggaaagctagctcaagctcaccctcaatctcaatctcaagctggggcttgcaaatcttgttctcctctttgattttattttctcaagtgttgctgctcacttgtgctcagctcagagaaagatctgatttagtgattttgattctcgttttggttggggactgttggttgcaggtcaggaggattacagcaggttgaggcctctgagctacaggggagccgatgtgttcatcctgtccttctccctgataagcagggcgagctatgagaatgttcagaagaaggtgaactgcttagaaaccccttgtcattctgatgcaattttttacttggttggatatgttactttccttcgcattgcgctagtagaatcgctatggtttcctgatgcattgcattggcaagattgtagatatgtagttcagaaatacgcactgtttcaggtattcaggtgggcattatgctgaggaggtatcatgtcaaacaaacatggaagaatattaaaagcattgaacaatttgtcgtgtgtaataataacgctttctaaaagcgtgattcgtacaattgctttcctcgaaaagaacaaggccagttgagccgtggagacttagactttgctcgtcacgcttttcttttgcagctgtttgtgcattatatgcaaggttataatataaagccgaagatgaaattgcgagcaaaggagataatttctgttaatgccgaattaattaccagttgacaaaattgttaggagttgtggctcacttttgatttacttcgataatggtaaaacgcctccggttgtttgctctataatagcttcctaatgtaaataagatatcaacacgaagcttactacctagagacaagaaagcccatttacatgtacaccacattgcatcatgctttgtctcattacctttagaatctctaaagtgtgtactaatgacctgacttcatctggacagtggatgccagagcttcgccggtttgcgcctggtgttcctgtagttcttgttggaaccaagttgggtatgctatgctattcattaattcaccctttaccttctgaaatttcttaattttttgaacgccattcaaccccacgaagatatttgatacagtaaccacagcccagtgacattctttgctgatgctgcattaccgatttcctgtctgttcagatctccgtgaagatagggcctatcttgctgatcatccagcttcttccataataacaacggagcaggttggtgttttgactgtgacaagagaatgacacatttttgccacatttaggttagccaggtttcacatttttaggtcacagtttggttcatgccaaagttgtggctcaacacactttctgagcaccttgtcacacttgtcacacacaatttttccaaatacttgtggcacttgatttgttagccatgctttgtgtgtgttgcccacactttcggaagaaaactgtggcaagatgtggcacacatcctcaacaatgagactttcctgactctttctacatgttagggagaagaactgaggaagctaataggagcggtcgcctacatcgaatgcagctccaagacacagagagtatgcttctgttataccctatgcaggaaaactttggaattttgagctccttcatatttaatcatttactcacatcctaatctaaagaaatgttctttttcttggttacttgtagaacattaaagctgttttcgacactgccatcaaagtggtgcttcaacctccaagacataaggatgtaaccagaaagaaactccaatcaagctccaatcggccagtaaggtacctttgaagtttacactgtctgctcacacttcatcagtcatcacttcatcagtggtgcatcatcttttccagttcagcattttgatttccaatgaggcctttgacacttgatcatgattctgtaggcggtacttttgcggaagcgcttgtttcgcgtagtcaataaccaagaagaaaaaaatgtggtttttgttccatcaccatgatgttcagatggccccatggatctactcagaatgggatagaagatcatggttgaatcaacattgcttgcagctaggaggaacttctagttctctttttttctgcagtggagctccttttgtttctcctttctctttttttcttatgttgtaaaagctccagaaagttttacccttggtaataagatgtgctcttctggatggct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0229400, RefSeq:Os01g0229400