Os01g0332800

From RiceWiki
Revision as of 18:50, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0332800

Description

Similar to Serine carboxypeptidase II-like protein

Version

NM_001049468.1 GI:115436349 GeneID:4326840

Length

3786 bp

Definition

Oryza sativa Japonica Group Os01g0332800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:13058083..13061868

Sequence Coding Region

13058289..13058441,13058561..13058666,13058989..13059084,13059174..13059322,13059409..13059684
,13060009..13060097,13060701..13060793,13060890..13060985,13061117..13061224
,13061483..13061759

Expression

GEO Profiles:Os01g0332800

Genome Context

<gbrowseImage1> name=NC_008394:13058083..13061868 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:13058083..13061868 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcctcttgtgcatcaccaaggctcaaatccctgtgccaccatccactcttcatcatcttgcttgctctctcattgctgcagacaatcacagcagaggatgagcaggaggctgatagggttgccttcctccctgggcagccaaggagcccacagatgtctcagttctcaggctacatcactgtgaacagccagaatggcagggcactcttctactggttctttgaggctcaggcactgccttccaagaagcctctcctgctctggcttaatggaggtcctggttgctcatctgtgggctatggagcagcttctgaattgggtcctctcatggtcaatggaaatggaacaggtttggaattcaacaagtttgcatggaataacgaggccaatttgttgttcttggaatctcctgttggagtcggcttctcctacacaaatacctcgtctgacctagagagcatcgatgaccgttttgtcgctgaggacacctacaatttcttggtgaattggttcaagaggtttcctcagtacaaaaaccatgacttctacatctctggagagagctatgcagggcactatgttcctcagcttgctgatgtagtgtatgagcgcaacaagcatgttgaaacaaaccagcatatcaatttgaaaggatttattgttggcaatgcagagactgatgattactatgactacaagggactagttgagttcgcttggagtcactcagtgatctcagatcaactctataagcatgtcaacaatgtttgcgacttcaggttatcaccccgtagcaatgagtgtaaccatgtaatgggatacatatatgatcagtacgatatgatcgatattttcaatgtgtatgcacctaagtgcaacactgatgactcatccctcttttccacctcctacagtacagctgatatgaatgctaagaagaggcttaaaggcacgaggatgtactcagggtatgatccgtgctattcgtcacatatcgaagattacatgaacaagatggatgtgcagaaatcacttcatgcgaatacgagtggattgatcaaggacagaaaatggagtatctgcagttattcaatattcgacaattacgacatcacggtcttctctgttcttcctatttactctaagcttatcaaggctggcctacgaatatgggtctacagtggagacgtggatggcagggttccagttattggatcccggtactgcgtagaagcccttggccttcctgttaagtcacagtggcaaccatggtacctaaacaatcaggttgctgggagatttgttgagtatcaaggattgacaatggccacagtaagaggagctggacatgcagtgccacaagacaagccagaacaggcactggtggtaatcaattcctttctttcaggcaggcgactaccaacaaaaaacaaccgatga</cdnaseq>

Protein Sequence

<aaseq>MASCASPRLKSLCHHPLFIILLALSLLQTITAEDEQEADRVAFL PGQPRSPQMSQFSGYITVNSQNGRALFYWFFEAQALPSKKPLLLWLNGGPGCSSVGYG AASELGPLMVNGNGTGLEFNKFAWNNEANLLFLESPVGVGFSYTNTSSDLESIDDRFV AEDTYNFLVNWFKRFPQYKNHDFYISGESYAGHYVPQLADVVYERNKHVETNQHINLK GFIVGNAETDDYYDYKGLVEFAWSHSVISDQLYKHVNNVCDFRLSPRSNECNHVMGYI YDQYDMIDIFNVYAPKCNTDDSSLFSTSYSTADMNAKKRLKGTRMYSGYDPCYSSHIE DYMNKMDVQKSLHANTSGLIKDRKWSICSYSIFDNYDITVFSVLPIYSKLIKAGLRIW VYSGDVDGRVPVIGSRYCVEALGLPVKSQWQPWYLNNQVAGRFVEYQGLTMATVRGAG HAVPQDKPEQALVVINSFLSGRRLPTKNNR</aaseq>

Gene Sequence

<dnaseqindica>3428..3580#3203..3308#2785..2880#2547..2695#2185..2460#1772..1860#1076..1168#884..979#645..752#110..386#tccaaacactgagctggtagtggacacagagagttctgcactctctttcactgaggagagcagaacagaacaagaggaggagaacaaaaaaaaaaaagagaaaaatcctatggcctcttgtgcatcaccaaggctcaaatccctgtgccaccatccactcttcatcatcttgcttgctctctcattgctgcagacaatcacagcagaggatgagcaggaggctgatagggttgccttcctccctgggcagccaaggagcccacagatgtctcagttctcaggctacatcactgtgaacagccagaatggcagggcactcttctactggttctttgaggctcaggcactgccttccaagaagcctctcctgctctggcttaatggaggttgttgtcatttgtgcattgagcatatgcatttctttgcttgatggattgttcattcatattgatcagtagcaagcaaacaagtattagttgtactttgatttgtctgcagctatatatgtttattcacctgatgtgtgatggtttagttcgtcctttctaagtagtcatagaatatttaccctgtcatttttgtatgtgtgtttctttcactgtttcttgttttgtatcgccattcaactgaatttccatattcaggtcctggttgctcatctgtgggctatggagcagcttctgaattgggtcctctcatggtcaatggaaatggaacaggtttggaattcaacaagtttgcatggaataacggtacgatattattgttcatcttttaccgctcgtatcatgttgcactccgaagtcacgtcatgtgtaaagttgctaccggtcaatgtgggactaacagaattaatctgcaattgttcctctccatgtttcagaggccaatttgttgttcttggaatctcctgttggagtcggcttctcctacacaaatacctcgtctgacctagagagcatcgatgaccgttttgtcggtatttatctagtctcaggatcttcaacttacctcccttaaagtctgaaaaatttgtgttattgtgctcattaactgtatttttcgagcggcgcagctgaggacacctacaatttcttggtgaattggttcaagaggtttcctcagtacaaaaaccatgacttctacatctctggagagagctatgcaggtattgtgcagacagctccctttcttccaacaaaaatatagaaaagttgaataagcccacaagaaaaagaaaaagataccggattttcaccttttgttaattaatgagtagtgtaagcatgcaaaacaggaataaatccaccatctttccactcctcaatattctctagtcaaaaggtttagcctagaatacatgtagtcatccagatcctattccctgaagtcttcagtccacaccaatacatggatcccactataccacctttattaggtcctgaacaagttgatgtttgttattctgttgaaaaatacagctatcttttgttagggttggaatactcattttttgtttgcttctgtcactaaacccaaaacagtcctatcaagggtcaaaggagagagtggcttattcaacaaactatatggtcaaaagtactcagatttaaacattggtggccatctagtggacacacgtatcagggcatatgctgcaaaccacatcatccaatgtgtttcacaacatgcaaacataaccttgaataataagacagttaccaactttttattttgtggggaaagacacttaccaactttgatgcaacagggcactatgttcctcagcttgctgatgtagtgtatgagcgcaacaagcatgttgaaacaaaccagcatatcaatttgaaaggatttattgtaagtaccttatgaaactgatcaaattttcttttggcatcagatttctgctgaaagaatgttatattggaaattagcttgagaccttatatgtgagtgctatttcctcgaacatgtttatgaatgattgtgtatttgtgggctttgctggatctctgtttattgagttgttctagtttgaaacgctgacaagcaattcttttatcttataatactttcatttcctcattcataccattcaatttaagcatattatgcattcagtatgctctcccaaaacaaactgtcaatgatccaatcacaaatgccaacaatattttgcaggttggcaatgcagagactgatgattactatgactacaagggactagttgagttcgcttggagtcactcagtgatctcagatcaactctataagcatgtcaacaatgtttgcgacttcaggttatcaccccgtagcaatgagtgtaaccatgtaatgggatacatatatgatcagtacgatatgatcgatattttcaatgtgtatgcacctaagtgcaacactgatgactcatccctcttttccacctcctacagtacagctgatatgaatgctaaggtaactgtaatgcttaacaactagtatttgtactgtagcaaatatgaaaacagaatgaactgaagataattgaatgcaaatttcagaagaggcttaaaggcacgaggatgtactcagggtatgatccgtgctattcgtcacatatcgaagattacatgaacaagatggatgtgcagaaatcacttcatgcgaatacgagtggattgatcaaggacagaaaatggagtatctgcaggtcatatatgcatgagcttccttgtgaatttctgattgatcagatatactaaatggatagaagaaatgacatcctccatacatttgcagttattcaatattcgacaattacgacatcacggtcttctctgttcttcctatttactctaagcttatcaaggctggcctacgaatatgggtctacaggtttggttcttgcatactagtttgccttaagaatttgatcaagatattatgttatgctacaaactacattatctataagggacaattgcccttatatctcattttttcttcatcatgctttcaaaaaagtttgtttcatttccctgcctttgactgtcatgagttggtttagtgattttttaagtgccactcaagtagactcatacttacattcaggacctgcttttacttatgctcactaaattctgtataatttcgaattcatcaaagtcatcacaaaatttgggaccaacacgagggaattatcaatttgattttacagtggagacgtggatggcagggttccagttattggatcccggtactgcgtagaagcccttggccttcctgttaagtcacagtggcaaccatggtacctaaacaatcaggttgttaccctattacatattccgtgtcatctacgtgtattaatcaaaataaagtgtaaaattatgaattacaatttgtaatattgcacaatttcttcacctatgcaaatccaatgtaggttgctgggagatttgttgagtatcaaggattgacaatggccacagtaagaggagctggacatgcagtgccacaagacaagccagaacaggcactggtggtaatcaattcctttctttcaggcaggcgactaccaacaaaaaacaaccgatgatacaacccagataaaacttacacataaaaataaagaaggaataagtcatcgatattatcatacatagatgaaacaatacatgtattgtaggctcttcatgtatgcaattgtctgtgtcaactagatgccaccctatacattaatctgtatattttccttatgtttgagttttatgttgagaatgataatttcaaccctatattttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0332800, RefSeq:Os01g0332800