Os01g0382900

From RiceWiki
Revision as of 18:51, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0382900

Description

Conserved hypothetical protein

Version

NM_001049629.1 GI:115436671 GeneID:4325427

Length

4086 bp

Definition

Oryza sativa Japonica Group Os01g0382900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:16224418..16228503

Sequence Coding Region

16224897..16225015,16226003..16226132,16226914..16226994,16227787..16227885

Expression

GEO Profiles:Os01g0382900

Genome Context

<gbrowseImage1> name=NC_008394:16224418..16228503 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:16224418..16228503 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcccgctgctcttggctcactctccccaatccgcgccacctccgccggtcacgatcgccacggaggtctatccgtcgcctccgcctccgtcctcgacgccacagtctccctctatagtcaagttcttataaaatttgggagtgcatctctgttgaacccggccgacccgaccctgcaacaacgcctcaccaaccgtcgcccatctctgcttggacaacatagtcaactgccatctgctcatttcacggataaggagactaggagagtgattgggaggatctgctacttctttgtcggatctgccacttcttgcaatcagcaaacatacaaatggttaagattgttgggggctccacaccatcaagtacaaaatcaggttagccatgtgcatgttattgactcaaatgatgcactctttgcatgctaa</cdnaseq>

Protein Sequence

<aaseq>MPAALGSLSPIRATSAGHDRHGGLSVASASVLDATVSLYSQVLI KFGSASLLNPADPTLQQRLTNRRPSLLGQHSQLPSAHFTDKETRRVIGRICYFFVGSA TSCNQQTYKWLRLLGAPHHQVQNQVSHVHVIDSNDALFAC</aaseq>

Gene Sequence

<dnaseqindica>480..598#1586..1715#2497..2577#3370..3468#gcaccctcctcgccccctcatcgccgccctcgaccgccgacgccccgcgcgccctccaccgccaccgccctggaccgccgccgcctcctcgccgccatcgaacgccgacgcccctcgccgccctcgaccgccgctgcctcctcgccgccctcgaccgccgacgaatcctagacccacgcccggcgtcccgcgtcgcgcgccgccctcgaccgtcgacgctgcgacccgtgccgcctcctcgccgccgtcgtcgcgccccgcgccgccctcaattgccgacgaaccctagacccgcgccccgcgccgccctcgaccgccaccgttgcgcctcgccgccgatatctcccacccgcgtcgctgctcgccggctgcttcgtcgatctgctccgcgccgcccgaacaactacgactgcgccaccgggagaccaacagccgccgttggctgcttcgccgatctcctccgcgtcgtcgggagaccgatgcccgctgctcttggctcactctccccaatccgcgccacctccgccggtcacgatcgccacggaggtctatccgtcgcctccgcctccgtcctcgacgccacagtctccctctataggtacaggtcccctcctgcctcaccccaacctccccccccctccctcttctctctctacccaaccctaattactcggcccgcagtccattgccggggtaggcctcgccgccaggccccctcccttctgccacatgaaaatctgctcaattttttttaccagtgaagcatgtatatcataaaggtgctgaatatagtagagaatcagatatcataattagtggaaaatcatacattggcctaatatatacagcagaggtcccaaattaacttttcagtcaaacaattgcaataatcgagtaccatcgctcattatctggagtggtttggcgatgtagaggccgggtttatcccattttctaaaaaaaaaatgtctggagtggtgcaatcttccccgaagcactataatgcttgcctggtgaattatgtgaagaatcctctgaagtagtggcacatcaaccttcttcgcttaactggaacaataaaacagcaatgggattttgtcagtttcttcagacatcggccaacattgttcacttctgtaaaattgctaatcatggtttattttaagtttattacttaggattagcagaagttaatttattggactgcttcaaagtgagtctgcctggtgtgtacaaatttgcataaaactgaatatgaaggagcgcaagtcatgaactgattgatgctccaggaaaacaataacagcaattaacagtttcactctccctaaaaaaatacagcaactaacagtttcagaggccctcctttatgttcatgaatcaaatcaaattgattatttatacaatttatatatctgcataatttgtctcacaatgatcatgacattcaagttattgctacttatttcagtatatttaaactgttgtcgcagataaaaatcagactttttgctctcatcatgcaaagaataatttcttttattctttactgctccaatgatacttcggttatttttctacttagtcaagttcttataaaatttgggagtgcatctctgttgaacccggccgacccgaccctgcaacaacgcctcaccaaccgtcgcccatctctgcttggacaacatagtcaactgccatctgctcatttcacggtataacccagcatttttcccatccttatttattttcctcctctcttctgatcttgtgagatttttttcttcatctttattgtgggtatgtctctgcaatattctttgagtacatctagattcacatagacctttgatccagtgtcctgtgacatgtccaattatatattttgggtaccatgtagatcagttattaattctacgatgccagaaaattactgggcttcacattgaaaggctataaatattattctatttcttccctctcatcttaattgtgtgtgacaaatactttgtgtcatgactggtccttagctagatataattaatgcatggaatgcttgattggttcatgaactggccttaaattgcagtcaagatccatccatgtgttacaagcagatgtttcgtgaatacttttgctaagctctgtactgttcttagctcgaagacttttgctatgctctgaatactttcactgtttgcatatacactatcgctaggagaggatcaactgtatctattgtttgcggaacagatatggcatagcgtgtagattttgatgctatcacatttcgtcttcagtttgattaattaaccattcccctgggaccattgctgactgtcctataaataactgtactgacatattctctgttgctgaaaagaaaaaaaattcttgctgatatggtcttctttgcaacctggaatggtcagtttaggaacctggaatgttgtccttgcacaactaacgaagtaatgatatggtcttgatttgcaggataaggagactaggagagtgattgggaggatctgctacttctttgtcggatctgccacttcttgcaatcagcaaacatacgtaagaaagtgcctttagctaattgatctcttcaaactcctatctaaacatgaacaataagtcctcggccttgagtgattagggaatgtcatatatatatagcatttgaatgaacttagcttcagtcttaagactcttggtgcgattacaaactctgaactcaaatggagaacacctctctttttaggtcaacattctgaatctgcattggcaacatgcaggcatctttgaagggtttctcaatgggtctatgagggcaccaattacacactaataatttagcatttaagctgtaggaagcctgtcgatctcctgtcatgtatacagaaataggagctttgaagtcttgtgcatctgaagcccagaatacatgaagctcctatgctgagtttttatcatcactatgaatttctaaagatgccctgtacacttgaaagtttactgctgaattttcgagcttttactattgttctaaaattcttgagatgtactatcaggactcgaaagttgagtgtctcactccattgcatcttgtttttaagatacttaaatagaggagcaattagaacaatgagatgccattcaatcgtttgaactattttgtcacgtgaggaaacctggggagtagtttgatattcttttttgttcactattttctctctatttttgatctatcaaacagatgcataataagatgctagcctcgtcatcaatgaaacgtgtgcactgcatatttctgttggttgtttcacaaattcataatatttgatctatcatctcatttattttcagaaatggttaagattgttgggggctccacaccatcaagtacaaaatcaggttagccatgtgcatgttattgactcaaatgatgcactctttgcatgctaatttcgcccatgtcttcctttcttatgccctcttgcaaatatataatttttttgagaaatttaatgatttactattaacaaacgcccgattattttttctttttttaaaacgtgatcattttgctcataaaatgtgacctattttaagcaagccatgctttagttcctttttaaaaaattgcattcaaataacagtgcattagcacaaaaatgtgccgttgtttgctgggctatttttctctcaaaggtttagaagtgacaaattaaaaatcttggactattgaagtcatatacttggaggatgatcccctggtcaacgacgtagtaatatgcccgtgcatcttgttctttagatacagatcttagctaggatttgggatgaaagcaaaaaaatatgcgttcacatgtataagggtcacagaggaccaattagaacaatcagatttatatccctgggattcatgttctgggcagaaattctgtttaaatctgcaaatattattttataccatattttgaaattagataggatgtggaacttcctgctactattggtgtttcagtaatctgtattggcaatacagttgttctcatggaattaatatgtttgcatctattc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0382900, RefSeq:Os01g0382900