Os01g0504100

From RiceWiki
Revision as of 18:51, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0504100

Description

Protein of unknown function DUF6, transmembrane domain containing protein

Version

NM_001049677.1 GI:115436809 GeneID:4324489

Length

1341 bp

Definition

Oryza sativa Japonica Group Os01g0504100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:19147322..19148662

Sequence Coding Region

19147451..19148590

Expression

GEO Profiles:Os01g0504100

Genome Context

<gbrowseImage1> name=NC_008394:19147322..19148662 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:19147322..19148662 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggacacagccgccaagctccactctcccaccactcccctcctcgcccacgcccaccatgacgaccgcctcttactctgctccccgccggcggccgtggagttccctgtgctcaagagcagggcggcgcggggcgcgctgctgctggcggcgaactacgcggcgttgtttgtcgggtcgctctcgtccagcctgctctctcggttctacttcgcgcacggcggcgccgaccggtggctggccacgctcgtccagtcggcgggattcccggcgctcctgctgccgctgatgtgcgcgcggcggccggcgtcacggccgttcgccgggttcacgccgcgcctggtgatgtactgcgtcctgctcgggctggtgatggggctcaacaacctgctctactcgtgcggcacctcgtacctgccggtgtccaccacggcgctactcctctccatgcagctggctttcacgctggcgctcgccgcggcgctcgtccgcgtgccgctctccttcgccaacttcaacgccgtcgtgctcctcacgctctcgtccctgctcctcgcgctccgccacggcgcgggcggcggcggcggcggcgcggacgccaccagcccggactacctcgtcggcgtcgcggcgaccctcggcgcggcgttgctcttcgcgctctacctgccggcggccgagctcgtgtaccggcacggcggggtgacgggcttccggatggtggtggaggcgcaggtgattatggaggcggtggcgacggccgtcggcgcggccggcatggtgtcgtccgcggggggcaagtggccgtgggacggcgtggaggccacgtgggatctgtcgccggcggcctactacgcggtggtcggggcggcggtgcttagctggcagctgtgctttcttggcaccgccggaacggtgttcctgacgacgtccctgcacggcggcatctgcatgacggcgctgttggcggtgaacgtggccggcggcgtggtggtgttcggcgacgagttcgggccggagaaggcggtggccatgctgctctgcctctgggccttctcgtcctacgtctatggggagtacaagaaaggggacaaggccatggcaaatgaggaggaccaagggattctggatcgggtctaa</cdnaseq>

Protein Sequence

<aaseq>MDTAAKLHSPTTPLLAHAHHDDRLLLCSPPAAVEFPVLKSRAAR GALLLAANYAALFVGSLSSSLLSRFYFAHGGADRWLATLVQSAGFPALLLPLMCARRP ASRPFAGFTPRLVMYCVLLGLVMGLNNLLYSCGTSYLPVSTTALLLSMQLAFTLALAA ALVRVPLSFANFNAVVLLTLSSLLLALRHGAGGGGGGADATSPDYLVGVAATLGAALL FALYLPAAELVYRHGGVTGFRMVVEAQVIMEAVATAVGAAGMVSSAGGKWPWDGVEAT WDLSPAAYYAVVGAAVLSWQLCFLGTAGTVFLTTSLHGGICMTALLAVNVAGGVVVFG DEFGPEKAVAMLLCLWAFSSYVYGEYKKGDKAMANEEDQGILDRV</aaseq>

Gene Sequence

<dnaseqindica>73..1212#aaacatcaaggaaggcagcaaactgcaaacccccatcctgtccctctccccctcccttaccttccactcttgatggacacagccgccaagctccactctcccaccactcccctcctcgcccacgcccaccatgacgaccgcctcttactctgctccccgccggcggccgtggagttccctgtgctcaagagcagggcggcgcggggcgcgctgctgctggcggcgaactacgcggcgttgtttgtcgggtcgctctcgtccagcctgctctctcggttctacttcgcgcacggcggcgccgaccggtggctggccacgctcgtccagtcggcgggattcccggcgctcctgctgccgctgatgtgcgcgcggcggccggcgtcacggccgttcgccgggttcacgccgcgcctggtgatgtactgcgtcctgctcgggctggtgatggggctcaacaacctgctctactcgtgcggcacctcgtacctgccggtgtccaccacggcgctactcctctccatgcagctggctttcacgctggcgctcgccgcggcgctcgtccgcgtgccgctctccttcgccaacttcaacgccgtcgtgctcctcacgctctcgtccctgctcctcgcgctccgccacggcgcgggcggcggcggcggcggcgcggacgccaccagcccggactacctcgtcggcgtcgcggcgaccctcggcgcggcgttgctcttcgcgctctacctgccggcggccgagctcgtgtaccggcacggcggggtgacgggcttccggatggtggtggaggcgcaggtgattatggaggcggtggcgacggccgtcggcgcggccggcatggtgtcgtccgcggggggcaagtggccgtgggacggcgtggaggccacgtgggatctgtcgccggcggcctactacgcggtggtcggggcggcggtgcttagctggcagctgtgctttcttggcaccgccggaacggtgttcctgacgacgtccctgcacggcggcatctgcatgacggcgctgttggcggtgaacgtggccggcggcgtggtggtgttcggcgacgagttcgggccggagaaggcggtggccatgctgctctgcctctgggccttctcgtcctacgtctatggggagtacaagaaaggggacaaggccatggcaaatgaggaggaccaagggattctggatcgggtctaaattttgctttcagatcagattaagaaaaaagaaaaaaaaagaaagaagagaaagcacttctagtctttttttttccctttcatgtgaataaccaccatgcacataatgtgaaaagttactagctttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0504100, RefSeq:Os01g0504100