Os01g0549400
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Contents
Annotated Information
Function
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Expression
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Evolution
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References
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Structured Information
| Gene Name |
Os01g0549400 |
|---|---|
| Description |
Similar to RNA helicase-like protein DB10 |
| Version |
NM_001049830.1 GI:115437435 GeneID:4326190 |
| Length |
5717 bp |
| Definition |
Oryza sativa Japonica Group Os01g0549400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:22179292..22185008 |
| Sequence Coding Region |
22179403..22179825,22179948..22180016,22180939..22181208,22181469..22181819,22181986..22182263 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:22179292..22185008 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:22179292..22185008 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgtcggcagggaccgccccggccgcgccgcggtacgcgccggacgacccgtcgctccccaagccgtggcgcgggctcgtcgacggcaccaccggctacctctactactggaacccggagaccaacatcacccagtacgagaagccgctgccgcccgaggaccagctcccgccgcccccgccgctccccccgccgcctccccgctccggccgaggcgaccgagaccgcgaccgccgcgaccgctcccgatcccgcaccccgccgcggcgcgaccaccgggaccgcgaccgggaccgcgacaggcgccacgacgaccacaggtcggcgccttcccaccaccatcctcttccggccgccgccgccatcgccgccgatgatccctccaccgaggcgtatcgccaccgccacgagatcaccgttgtcggggacaacgtgccagctccgataacttcgtttgagactggtggattcccaccggaaatcctcaaggagatacaacgtgctggattctcaagtccaacgccaatccaagctcagtcatggccaattgccttgcagtgtcaagatgttgtagctattgcaaagacaggatctggaaaaactcttgggtatctacttcctggatttatgcatattaaacgcttgcaaaacaacccaaggtctggtccaacagtgctagttttggcaccgacaagggagcttgcaactcagattttggaagaagctgtgaaatttggcagatcatcaagaatttcttccacgtgtctatatggtggtgctccaaaaggcccccagctaagagatttggatagaggggtcgatgtcgttgttgctacaccaggaaggttgaatgacatcctagaaatgcgaaggataagccttaagcaagtgtcgtaccttgttctagatgaagctgaccgtatgttggacatgggatttgaaccacaaattcggaagatagtgaaagaaattcctcctcgtcggcaaaccctcatgtacactgctacttggcctaaggaagtccgacgaattgcagaggatcttcttgttcaccctgtccaggtgaccattggaagtgttgatgagcttgttgctaatagtgctattactcagaatgtggagctgatcacaccgtccgaaaagcttcgccgtctggagcaaattttgcgatcccaggattcaggttcgaaggtactaatattctgtaccactaagagaatgtgcgaccaacttgcaaggacacttactaggcaatttggagcttctgccattcatggtgataagtcccaaagtgaaagagagaaggtcctgagccattttagatctgggcgatctcctattttggttgcaacagatgttgctgcacgaggcttagacatcaaagatatcagggttgtgatcaattatgatttccccactggcattgaagattatgttcaccggattggcaggactggaagggctggtgccactggtgtggcctatacgtttttctgtgaccaggattcaaaatatgctgctgatcttattaaaattctggaaggcgcaaaccaacgtgtgcctcgtgacttggcggacatggcctctcggggtgggcgtggtggtaggaagcgtaaccggtgggcaacccgctctgataggggtggttcgcattctgaactggattctaggtatggtggaagagatggtctgtcagggtcttctggcagattggatagtagtcgcagtagtcgcaggcatgactatggtgatgatggacggtctcgcaggtctgggagaggtcgcagtaggagccgtagcagaagtgacagtgataggtatagccgaagtcctaagaggtcacgccgtcatagccgtagcaggaccaggagtcggagccgaagcaggagcaggagctacactaggaaccgtcgtgctagccgcagcaggagccgtagccctggtgctagccgtaggcatgaaagaagcgctactggctctgggtctgcactgccagactctgggcacggtgagcgcaaaagaacaccagaagctgacccatcaagaaaccatacaaaccactcagacccgaaagatgaccgacacccagaggatgggaaggtgggaaaggttgatctcgatcggtcgcctactccacaagacaagtctggcccatatagtcctgcttacaatggaaaaaccagtcgctcagtgagccctggtaatcaggtggaaggaaacaacaaagctgcggaggtttctaagaatcctgatccttcatcgccaccccatcatggtaagaccagggaggacgaagaggaaggtatgatagatgaagatggagagatagctgatgatcctcgggcaaatgcaaccgtgcagaatggcggtgataattga</cdnaseq> |
| Protein Sequence |
<aaseq>MSAGTAPAAPRYAPDDPSLPKPWRGLVDGTTGYLYYWNPETNIT QYEKPLPPEDQLPPPPPLPPPPPRSGRGDRDRDRRDRSRSRTPPRRDHRDRDRDRDRR HDDHRSAPSHHHPLPAAAAIAADDPSTEAYRHRHEITVVGDNVPAPITSFETGGFPPE ILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLPGFMHIKRLQNN PRSGPTVLVLAPTRELATQILEEAVKFGRSSRISSTCLYGGAPKGPQLRDLDRGVDVV VATPGRLNDILEMRRISLKQVSYLVLDEADRMLDMGFEPQIRKIVKEIPPRRQTLMYT ATWPKEVRRIAEDLLVHPVQVTIGSVDELVANSAITQNVELITPSEKLRRLEQILRSQ DSGSKVLIFCTTKRMCDQLARTLTRQFGASAIHGDKSQSEREKVLSHFRSGRSPILVA TDVAARGLDIKDIRVVINYDFPTGIEDYVHRIGRTGRAGATGVAYTFFCDQDSKYAAD LIKILEGANQRVPRDLADMASRGGRGGRKRNRWATRSDRGGSHSELDSRYGGRDGLSG SSGRLDSSRSSRRHDYGDDGRSRRSGRGRSRSRSRSDSDRYSRSPKRSRRHSRSRTRS RSRSRSRSYTRNRRASRSRSRSPGASRRHERSATGSGSALPDSGHGERKRTPEADPSR NHTNHSDPKDDRHPEDGKVGKVDLDRSPTPQDKSGPYSPAYNGKTSRSVSPGNQVEGN NKAAEVSKNPDPSSPPHHGKTREDEEEGMIDEDGEIADDPRANATVQNGGDN</aaseq> |
| Gene Sequence |
<dnaseqindica>112..534#657..725#1648..1917#2178..2528#2695..2972#4199..4543#4790..5432#agggctacagaagaaaacccgaaaccctcgccttctccctccccggcgccgccgccgccgccgcactaatccgccggagaccgggagatcgggccagatccgccggtggagatgtcggcagggaccgccccggccgcgccgcggtacgcgccggacgacccgtcgctccccaagccgtggcgcgggctcgtcgacggcaccaccggctacctctactactggaacccggagaccaacatcacccagtacgagaagccgctgccgcccgaggaccagctcccgccgcccccgccgctccccccgccgcctccccgctccggccgaggcgaccgagaccgcgaccgccgcgaccgctcccgatcccgcaccccgccgcggcgcgaccaccgggaccgcgaccgggaccgcgacaggcgccacgacgaccacaggtcggcgccttcccaccaccatcctcttccggccgccgccgccatcgccgccgatgatccctccaccgaggcgtatcgccaccgccacgagatcaccgttgtcgtaaggatctaacaactgtttgttacatcccgatgtttgtttattgtttacttactaagtacctaatttttgtttaattactaagtacctaatttttgggttggttggcgtccatggtgcagggggacaacgtgccagctccgataacttcgtttgagactggtggattcccaccggaaatcctcaaggaggtatgcaccatctgcttgggtgatgaatcctaacacatggcctaaccactaacacaaaaacggagttgcctatacttactagttcggcgagcgtgattacacagacttgtttctccttatttgcttgcttgatccttgactgtgctaaatcagagccggctgcgggtttcaattatttatctacatctctgtggcagatgcgatatttgctccaaaggtggagcgaatgtcgtacgctgcctcgcgcacccctcggccaaataagagcggcgggctgagggaagatgtcgttgatggagttgatagagttgctaagggtgggtgaacacccgaggcggctcacccctggctctctctcactccctaccgagggactgcccatggcgcaaaggggcaccccatgtggcggctcaaccttggcttgctcgcgcttcccgccgagggattgcccatggcgcaaaggggcacccatggcggctgatttgttgctctgcatccaatccctggagaaggctcctcacatggatggtgggcctcttctggggcctggccatggaggtcgcaccgtccataggacctgcgggcagctgctggaggggcttcgcacccaggctgtcaacgtccatacataggacctggacctgcgggcagctgctgaaggggtcctgtggatgaacgatccatggttgagcgaggctgcctccagggatgctgttagagccttttctacttcaccttgcgcatgcaagtcaacacatcttggatgcactttcttttgtacgatatcttaagttggactcatgcactgttgattctttgtttctactactaaagttttggagggaaattatagctacatatttacgatatccttatccttatccttattgtgtctgcttttgccatttccccttgttttcagatacaacgtgctggattctcaagtccaacgccaatccaagctcagtcatggccaattgccttgcagtgtcaagatgttgtagctattgcaaagacaggatctggaaaaactcttgggtatctacttcctggatttatgcatattaaacgcttgcaaaacaacccaaggtctggtccaacagtgctagttttggcaccgacaagggagcttgcaactcagattttggaagaagctgtgaaatttggcagatcatcaagaatttcttccacggtcagttcattctactatgatacatatgttattgttgggctactggcataaaacagtattagataatagatacacaggtttaattggctttatgttttgttactttgataaaccctattgaccatctaaaaaggattttcaaacatcatacaaatgcagatgtgctacctagtttccaaagcttgtttatcaattaagatctttgtctttatcttgccttgttttggattattatatgatgtttgtttatctgtttttagtgtctatatggtggtgctccaaaaggcccccagctaagagatttggatagaggggtcgatgtcgttgttgctacaccaggaaggttgaatgacatcctagaaatgcgaaggataagccttaagcaagtgtcgtaccttgttctagatgaagctgaccgtatgttggacatgggatttgaaccacaaattcggaagatagtgaaagaaattcctcctcgtcggcaaaccctcatgtacactgctacttggcctaaggaagtccgacgaattgcagaggatcttcttgttcaccctgtccaggtgaccattggaagtgttgatgagcttgttgctaatagtgctattactcaggtttgttccttaactgatgggctccattaatgatacttcaagatccttttgtttcctctcatcagttcctttggataagaaaaacagttggtactatttgaatgtacggtttcaccaaaaaaatcccatccttaagaagttactataattctctttttcttggcagaatgtggagctgatcacaccgtccgaaaagcttcgccgtctggagcaaattttgcgatcccaggattcaggttcgaaggtactaatattctgtaccactaagagaatgtgcgaccaacttgcaaggacacttactaggcaatttggagcttctgccattcatggtgataagtcccaaagtgaaagagagaaggtcctgagccattttagatctgggcgatctcctattttggttgcaacagatgttgctgcacgaggcttagacatcaaagatatcaggtactccatccgttcttttctggatgtttttgttctcaaatagatgtcctttttagcctttataggcagtgtttcctaacttaccccctagtagaagcgctggttcaataaatggaattatccttattcaactcaactattgccactactagcatgtttgcaagattaattaatatggtatttgctccaaccaaaaaaaacagcagctagcatagcactttgcttggctgtgcagtgaggtgctggttgtctgtgctatgtctatgaaatcgaccgatggcaggattggacaagtactttatactgctattaattagagatgatatagtgataaaaaaggttaattattccttggtcattgtgctttagcctaaatgatgtgtaattctgaatgaagggagcatcatttcaaagttttgttgatatgatattatactattttcattaaaaagtggaagcagattcctttggttctgtcatgtgcttataagaccaaagcacattgacacaccaaacttggagagtatttaaaattccttcagtcaattaatagggcaaagttgtctgtacagtaaggttttaaatataattgaagtgctcactattggttgtattatactccatccaaaagtctaagacctattccattctttggttttttctaaaaatctaagtcctatttgtagtcattattagttgcatgtttattggttttgtcacatggtgagtgagttaattgctccttggtcttggtgcaaaaagaaataggtcttagacttttggatggagggagtatctgggaaaatatactgattgaagttttcctgcatccactgtatgctgatgcaagtgtatatgtaatcttgggagcatagcattttgatcaacatagtttttagctttgttttggtattctagggcttgttcagtttggtgccaaaatcagcctaccaaaatttgacatcgccaaatgttggcatatattgacgttaccaaattttggtagcgttggatgcgtttagtttgtagccttaccaaaatttgatagtgtttttttgagaggaagttttgggaaataccaaaatttggtagggtgtcaatggcaatagaatgtttggtttgttaccttacaagttttggtaattgcacatttacatttgtacctatgtgcatcacgtgttgacgtttacattttaattgaattgacttctgtttcattggcacagggttgtgatcaattatgatttccccactggcattgaagattatgttcaccggattggcaggactggaagggctggtgccactggtgtggcctatacgtttttctgtgaccaggattcaaaatatgctgctgatcttattaaaattctggaaggcgcaaaccaacgtgtgcctcgtgacttggcggacatggcctctcggggtgggcgtggtggtaggaagcgtaaccggtgggcaacccgctctgataggggtggttcgcattctgaactggattctaggtatggtggaagagatggtctgtcagggtcttctggcagattggatagtagtcgcagtagtcgcaggtattttcgctttcacctctttctttttgaacactaattatcagtatcttttgtacacatgttatatgaagacattagtttcttttttgacagattcgaaacaagtttgacgaaattgttgatgaaacactttaaggatctaggtctcattagtttattagaagacctgatctgtggatttgctttatttagttgactgcagtattgcgcctgaatcttattattgagtttttctgcttttgacaggcatgactatggtgatgatggacggtctcgcaggtctgggagaggtcgcagtaggagccgtagcagaagtgacagtgataggtatagccgaagtcctaagaggtcacgccgtcatagccgtagcaggaccaggagtcggagccgaagcaggagcaggagctacactaggaaccgtcgtgctagccgcagcaggagccgtagccctggtgctagccgtaggcatgaaagaagcgctactggctctgggtctgcactgccagactctgggcacggtgagcgcaaaagaacaccagaagctgacccatcaagaaaccatacaaaccactcagacccgaaagatgaccgacacccagaggatgggaaggtgggaaaggttgatctcgatcggtcgcctactccacaagacaagtctggcccatatagtcctgcttacaatggaaaaaccagtcgctcagtgagccctggtaatcaggtggaaggaaacaacaaagctgcggaggtttctaagaatcctgatccttcatcgccaccccatcatggtaagaccagggaggacgaagaggaaggtatgatagatgaagatggagagatagctgatgatcctcgggcaaatgcaaccgtgcagaatggcggtgataattgactctttggtcccaaaagaatttaacaaactgctgagcagccactacagatgatctgcgtgacaaagctcaaaatgttaaaaattgtctgaagctgtcttttcgtagtcaaaacttaagttatgaaactatccgtgtcgtagagagctggagattgttttgtgcctgagttgtcttataacattatatactttgtagaccctgtcgaagtagatcatgtgaagtgaagttggtagctctgttatttgtgaaccaataccggaggtgcaaatcatgcaagattatgc</dnaseqindica> 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