Os01g0560200
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0560200 |
|---|---|
| Description |
Similar to Vesicle transport v-SNARE 13 (AtVTI13) (Vesicle transport v-SNARE protein VTI13) (Vesicle soluble NSF attachment protein receptor 13) |
| Version |
NM_001049883.1 GI:115437651 GeneID:4324687 |
| Length |
3140 bp |
| Definition |
Oryza sativa Japonica Group Os01g0560200, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:22932463..22935602 |
| Sequence Coding Region |
22932570..22932663,22932764..22932822,22933188..22933376,22934303..22934473,22935277..22935429 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:22932463..22935602 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:22932463..22935602 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgacgtgttcgagggctacgagcgccagtactgcgagatctccgcctccctcgcccgcaagtgcaccgctgcctccgctctccaaggagagaagctgaagcagaaggcgtcggagatcaagtctggcatcgatggggccgaggcactgataaagaagatggatcttgaagcaaggaaccaacagccaagtgtgagggctgggctgctggcaaaactgagggagtacaagtcagatcttaacaacctgaaaggaacgttgaagagggtcaccaccggtaacgcgcagcaagggtcgagggaagagttgctggagtcaggaatggctgaaacgttgggggtatctgctgatcaaaagtcaagattgctcaggataactgaaaagcaaaataaaacaaccgataggatcagagatagccacagaactatgctggagactgaagatcttggagtctccctcttgcaggacctgcatcaacagcgtgaacgtctaatacatgctcatggcacattggataacgtggatgacaacatcgggaagagtagaaggatcatgggtgccatggtgaggaggatggacaggaacaagtggatcataggtttcattatagctctccttgtgttggtgatcctagtaatcctgtatttcaagtttgtgcactga</cdnaseq> |
| Protein Sequence |
<aaseq>MADVFEGYERQYCEISASLARKCTAASALQGEKLKQKASEIKSG IDGAEALIKKMDLEARNQQPSVRAGLLAKLREYKSDLNNLKGTLKRVTTGNAQQGSRE ELLESGMAETLGVSADQKSRLLRITEKQNKTTDRIRDSHRTMLETEDLGVSLLQDLHQ QRERLIHAHGTLDNVDDNIGKSRRIMGAMVRRMDRNKWIIGFIIALLVLVILVILYFK FVH</aaseq> |
| Gene Sequence |
<dnaseqindica>108..201#302..360#726..914#1841..2011#2815..2967#aattcctcctcgcctcggttgtttcgtcccaggaaactcgattctgcttctgaatcggattttcccagggatttcgccggcggctaggatcgggtcgggggtccgccatggccgacgtgttcgagggctacgagcgccagtactgcgagatctccgcctccctcgcccgcaagtgcaccgctgcctccgctctccaaggaggtacccccaagaatcacatctcccagtattttctctgttaatctttgatgatccgggctaatttctttcctttctggcgggtgtttgattttctctgcagagaagctgaagcagaaggcgtcggagatcaagtctggcatcgatggggccgaggcactggtgaggggaaattatcagctttgctatttgcaatttgcaaatagataagagtgatactactgtgacctattgatttggaagaccttgtttggataattacattaatttattgtgaatcaaggatggatcgtttgtaagagtatatgttcctgtaccaatcgcgaagagaatatcagtttggtgggattatattattcaagggagcatttctttttaatgatttgatttgtgcagaagtggacaattttttatgggattagtttactgtgtgagttgaagaagagattacgttgtggtactaggtagctatatgtatgcgtagtcatgtatgttgcagcatttagaatgccacttctctgttacagataaagaagatggatcttgaagcaaggaaccaacagccaagtgtgagggctgggctgctggcaaaactgagggagtacaagtcagatcttaacaacctgaaaggaacgttgaagagggtcaccaccggtaacgcgcagcaagggtcgagggaagagttgctggagtcaggaatggctgaaacgttgggggtatgctgcttattctgaatagatatcattcctactatgcaggcgaataaaattcagggggtgttaggtggagcgtgattcacatgttttttttttcttgcgtttgaactttaggctttaatgtctgatatgataacatgaaacacctttgtgttctatgctaattacggtggttggtgataacatgaaacacctttttgatctatgctaattctgattggttcttgtcaaaattgtcccatgaatcaggataccagcacactttatggctctgttttaatagaatgattgatgtattgaaacgctcaatctatagctaaaccagggaggttagggaaaacaatagatggggcttaatttgcccccaaatgttcaggacatatactgatgtaatttcttttgattttctttttgtgcaaatttgaaaggaatgccaagtgaattatgttagtgtgagcttatagagtgcttcatgatgacttggtgagcagacgcatcatatatatactgactctgaatgaaaacatgcataatggccatgccattggtcagatgtatgtactatcatattaagttgcatctgacttatcacgagaatattactgtattgcatcgataagtcaatttttcttttcaaccagtatgaatgtctagggaatgttagtagatttatacatattttacatagtgctaatatatatctgtcaaaaggaaggctgagaacataatctaaagaatcatatcatcttgtaaaatccatactttcaatcaagcctgattctattgtactaataatctcatacacatgttgagctattcatctaagtttatttgacttattagtaacataagtttatccctttgccagtcaatagctatccatctaatgaaagcacgatcatgtattttgatgttcaatcatgcaggtatctgctgatcaaaagtcaagattgctcaggataactgaaaagcaaaataaaacaaccgataggatcagagatagccacagaactatgctggagactgaagatcttggagtctccctcttgcaggacctgcatcaacagcgtgaacgtctaatacatgctcatggcacagtaagtaactatttactatagtcattccctgtttggatcaactgcttactttttgtatctcatttatttactaatatgctcataattcccattgatatgtaatttgtatgcattctctgatagaaaatcatgtctaccataaatctgttctgtattggttgttataggtttccattctagtctattgacagacaaatatgtatgtacatgattttgtgtgtactcgtatgcgttaagccttttcacaccagtctaattagtactagtgctggatttttacctgctcctataggctccttccaatatacgctttacctgtattttacttgactcattgtattttatttcatgccatccttaacatctttttacaattttatatttttctttgatgtttctatttgagtatacggcgctagataaagaaatatcagtttgcagttaaattatcaaatccttgtataaaatacataatctctgatgctttatcttggcgagttgatgatttttcccccttcatcgtttacattactgccattactggtgcctcaatggtggtaacctcaaactctggtagcatgaattgaaaagtgaggcaacaatatggaaggtgttaataatgtttccacttttacaagtagtgatatagaattgtcccatcaatatcaattggccagagcacataaacaatatgatgaacatcgttccacagtaaatcatattcgattactgtacatggccttaggcctgagtgtatcctccttgtttttcccttgccattcatgtctttcttcccattgcagttggataacgtggatgacaacatcgggaagagtagaaggatcatgggtgccatggtgaggaggatggacaggaacaagtggatcataggtttcattatagctctccttgtgttggtgatcctagtaatcctgtatttcaagtttgtgcactgagggactccttgaccatccaaggactgatgaactgtgtgcgttctttgcatattcgttttgtcttatttctttttttgggtttggacgaaaccatttcatgtggtggttgtgaatgtgttttggtcatgtaaaaaaagtgagaaggttttgagtatctgatagtttcatggatc</dnaseqindica> |
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