Os01g0605600

From RiceWiki
Revision as of 18:54, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0605600

Description

Conserved hypothetical protein

Version

NM_001050056.2 GI:297597166 GeneID:4324212

Length

4926 bp

Definition

Oryza sativa Japonica Group Os01g0605600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:25513639..25518564

Sequence Coding Region

25516257..25517265,25517627..25517820,25517973..25518059

Expression

GEO Profiles:Os01g0605600

Genome Context

<gbrowseImage1> name=NC_008394:25513639..25518564 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:25513639..25518564 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>caggcattgaagataataagtttgtgtggttgggaaccccgcttgctaccctatgctgttgattgtggaactaaatctcattcagatgcaaactcttcctctacattgacccaaccagggctaataaataactcaatggaagatcgggttgttgtttatgcacctaatgaagttgatggttcaacagtaattgcagatgctcgtcaagcatatcagcattacgatccattatcagttgttttagattgtcaattttgtggagcttgtgttgccttgtggcctttttcacttgtagaacgacctcttcaactctttaagctgatatcagattctagtaggcaagatgagcaaactgaggggcatgctggcagagtcagtggcgcaggaccttcaaagactgcgaatattggttttaatttcactattgctggtggtcctccgccaactagacagaattttcggccaagagtttccttacctgttgtcagtcgacatttgaaagctgacttaagctcccatgggcattttatttcctctggaagtgataaccacatggttcctgttactttgcatgcttcagggctgaccaaacacaaaagaagcatggatgagtctcatatgttggaaggcaacaatacaatctcaactgatgctggcacaaccaccaatggagcagatcatcaaagagagaattctgtaaatggcacatcaaacttggtagcaaaccctgaacaccaacaagggggttcacattcagatacaagtagggttaccagcacaggagaagtttccaatgaagaatcagaaacaggtcatgctgcaatcaaaagtcacacaagcacagatgaacttggccaacatggatcagatcctaaatctttaccagttgaagattcttctaatgctcatgatttggcaaagacttgcacgaacaattccaggccagttcaggctgccacactcacaaaatcgtctaacgatggggaaaagggcgcatctcaaccatcaggaagccaaggcctgtatgacaaattgaatgaatttgatcctatgaagcagcacaggactttctgcccttggatatgccctgatggtggtgaaaccttgcctggatggaggctgacactgccggcattactttctcaggacaaaagaattgatgaggattcacaagtggagcctcagattagccttcttagtgaggaggatgaccctgttacgtctgttagaaagcttttcatgacaccaccttcaaagaagttgaggatacatcgggcagagaagggctga</cdnaseq>

Protein Sequence

<aaseq>QALKIISLCGWEPRLLPYAVDCGTKSHSDANSSSTLTQPGLINN SMEDRVVVYAPNEVDGSTVIADARQAYQHYDPLSVVLDCQFCGACVALWPFSLVERPL QLFKLISDSSRQDEQTEGHAGRVSGAGPSKTANIGFNFTIAGGPPPTRQNFRPRVSLP VVSRHLKADLSSHGHFISSGSDNHMVPVTLHASGLTKHKRSMDESHMLEGNNTISTDA GTTTNGADHQRENSVNGTSNLVANPEHQQGGSHSDTSRVTSTGEVSNEESETGHAAIK SHTSTDELGQHGSDPKSLPVEDSSNAHDLAKTCTNNSRPVQAATLTKSSNDGEKGASQ PSGSQGLYDKLNEFDPMKQHRTFCPWICPDGGETLPGWRLTLPALLSQDKRIDEDSQV EPQISLLSEEDDPVTSVRKLFMTPPSKKLRIHRAEKG</aaseq>

Gene Sequence

<dnaseqindica>2619..3627#3989..4182#4335..4421#aagcagcggcggcctctcctctccagccccgacgacgcatcgccgctcgccgccgatccactcgtctcgcgccaccccacgatggccaccggcggcggcggcggcggggacatcggcgccgactcggagcggcgcctcaagaaggccatggacaagctctaccacttccccaagcccaaggctggcacggggcccggctcctccaagccctcttccgcatccacctcctccgctctcaggtagggttcgctttcgctttgccctaatcctagccatggccgtgccccgtatctgcatctcgcatcatcttgacgtgtgcccctggcgtgctgatctggcggccgtgcagcatcgggagggcggggaaggcggctggcgcaggggggaggaggttcgggatggtgcggggctcgcggctcccgtcgcagctcgcggccatgtcggcgatctcgccgccgccgccgtgccgcccgtgggaccgcgccgacctcatgcggcggctcgcgaccttcaaggccatgacctggttcgccaaacccaaggtacgcccagttctaccctccgttggtttgcatcagctgaccgctggccactgattgtggaaaataaaagcgttacacctagctaagtggtttggtgcactttgtaatatactgcaataatcatggctaatgaatggagtttttttagatcgaaatggatgtttaaggtctctctcaattgatcggtgaaaattgctaatgaatgtatggttatgtcctggaattgttcctctataaattggttcggtttggggttatgaattggtgatgctgctgttcggtgaggggttatgtatggtgatgctgtcattggtaaattgtggaatcagtgagtttgttagtgtccttctctccattgtgtttgagaatcggaagggagatatctttgcagttgttgaaccagcatgcttagctcaagtatcttcgctgctttctgataggtgataacaagttgtcctttccaggttattagtccagttaactgcgcaaggagaggatggattaatattgagcccgatgttataacgtgtgaggcatgtgaggcacggcttctgttctccactccttcctcatgggcaccgcagcaaggtttgtgcattgttgtacttgactcgtgttccatctcaactactgtcaagaagcctataaataggcatacacttatatttggattttatatgaagaaagttaccattatgttttagaatgagggtgtattcaatgagtatagttttcatgccagttcatgcgaacctccaatatcttggcatcaatggcttccttgatttaagcatctgtttatatttattttcttacatctaaagctatttgccctgcagttgaaaaggctgctgctgtttttagcttgaagctggacaatggacataaactactctgtccatggattgacaacatatgtgatgaatcacttgccttatttccaccaacaccacctcctgttttagttgagaattaccacgagggtttctcctcacttctacgactctcagcacttccaagaatctcgtgctcttctctggagagcatgaagaagaggagcccacagctagagcagtttctattgaaaccgttctcttcatcagttgtccttaaagggggatttatacttactgaagattcaacaattaaggatttggatcacacttttcaagatgctgacacatattatcaggtcaggtttttgattatgctcaattgcttgctgtgagatttatcttttaaaattttacatacccatttcatttctagattacactttagtatgtctccatgatattggtttataaaacatgttccgcatgatgaataatgcctgattgctacagcaagagttactttgtttttgtgactcatttgatggatcatgcacaatacacatatgtaacttcctagttttaccacctatatacagtcttcactggatatcatgttcagttgtccatgcatatccaccagttgcatgcagaattagaaattcttatgctctccttttgtttccttgctgatcctgtcatatactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgttaatgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatgctagaatgacttacattgtgaaacggaggaagtacaagttttgaagtagtttgtgtgctattataaaattgcaatatttagaactagagtatagagtattttattttacttcatacagatgcaaatcctttgcaaggttcttgataaacatctacaatagcatattgttaggtttcatcaactgtgcacaattttatataacccgaggaacgcacttaatttctgtttgctacaagctgacttgtcagttctattggcattaaatcctcctacttatcttaggcattcatattactttctatacagaccctggattacattaactcttgtgtgcattttcatttgcattttttgttgtgcccaattcacgtgcaccacatcttgtctccctgcatgctaactaaatgctgaactgcctaacaggcattgaagataataagtttgtgtggttgggaaccccgcttgctaccctatgctgttgattgtggaactaaatctcattcagatgcaaactcttcctctacattgacccaaccagggctaataaataactcaatggaagatcgggttgttgtttatgcacctaatgaagttgatggttcaacagtaattgcagatgctcgtcaagcatatcagcattacgatccattatcagttgttttagattgtcaattttgtggagcttgtgttgccttgtggcctttttcacttgtagaacgacctcttcaactctttaagctgatatcagattctagtaggcaagatgagcaaactgaggggcatgctggcagagtcagtggcgcaggaccttcaaagactgcgaatattggttttaatttcactattgctggtggtcctccgccaactagacagaattttcggccaagagtttccttacctgttgtcagtcgacatttgaaagctgacttaagctcccatgggcattttatttcctctggaagtgataaccacatggttcctgttactttgcatgcttcagggctgaccaaacacaaaagaagcatggatgagtctcatatgttggaaggcaacaatacaatctcaactgatgctggcacaaccaccaatggagcagatcatcaaagagagaattctgtaaatggcacatcaaacttggtagcaaaccctgaacaccaacaagggggttcacattcagatacaagtagggttaccagcacaggagaagtttccaatgaagaatcagaaacaggtcatgctgcaatcaaaagtcacacaagcacagatgaacttggccaacatggatcagatcctaaatctttaccagttgaagattcttctaatgctcatgatttggcaaagacttgcacgaacaattccaggccagttcaggctgccacactcacaaaatcgtctaacgatggggaaaagggcgcatctcaaccatcaggtaaggatttcatttctatagatttggacaacgtaatgtcaagtactaattgtttgtttgctatatattctgtgcaattgccacaatttaaaggaattgaaagagataaataagcagaatattgaagggactggaaaagcatggagaataccaggagtaataacttgttagttaacttttatatagttgcaagagtttgagaacttctaatctaactacagttagcctactaacttcttgtaaatgttgatattgcacaaatagaatagttcttatttattgatgtctttaattaatggttttgaaatgtctgttgattctcagttcatatcataagcttaacaaagtctttccgttacaggaagccaaggcctgtatgacaaattgaatgaatttgatcctatgaagcagcacaggactttctgcccttggatatgccctgatggtggtgaaaccttgcctggatggaggctgacactgccggcattactttctcaggacaaaagaattgatgaggattcacaagtggagcctcagattagccttcttagtgaggtagtgctttttgttgaatcctgttcaatttccttttaactgtaagcttgcagtactgaatcctgtcttgtttctttttaactgctaccttagcagtattgaatgcaccatgtttctctctaatcatggccttacggtttttataatttcaggaggatgaccctgttacgtctgttagaaagcttttcatgacaccaccttcaaagaagttgaggatacatcgggcagagaagggctgataagtcagaactgtattggccagagttgggtgttcaggcgagtctcttccaatctgtctaaacatgtttgggacactggtcgcgagctctccacctgtggccatgagtactgtgatagaagccaaactgttttcacgggttccctagaaccagatttgttggcgagacggctgaaatcatgagacacgaccagccaaccaggtctgctgaaatctgtctgtatgcattgtataaatgtcgggtggtgggaacaaggaaagaaaagcgtaaggatttgtggtttgttccaacggcatgcttgattaggacgaacactgcctggaaatcttactgtaaagaccattggttattccttcctttcatggtggtttaaagaaaaaaaatggagggcattcatttcctcccccctggaatttttgtagcttattactagtaatgtttgtggttccagcacctgtgtaaactgttgctccaaaaagagtcaagctttgcagctgtttgatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0605600, RefSeq:Os01g0605600