Os01g0616300

From RiceWiki
Revision as of 18:54, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os01g0616300

Description

The start codon is not identified.

Version

NM_001050111.2 GI:297597202 GeneID:4326651

Length

4169 bp

Definition

Oryza sativa Japonica Group Os01g0616300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:26117715..26121883

Sequence Coding Region

26117844..26117854,26120848..26120863,26120955..26121116

Expression

GEO Profiles:Os01g0616300

Genome Context

<gbrowseImage1> name=NC_008394:26117715..26121883 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:26117715..26121883 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>gtggcggcattgctgaatttcctaaaggtaaatgttgaagatagccctatggtcgcgaaggcggagaacgtgcggatagtcccaacattcaagatatacaaagatggggtgaaggtgaaggaaatgatctgcccaagcttgcatgttctgcgctactcagtaaggcactatgccgtatctagttcttga</cdnaseq>

Protein Sequence

<aaseq>VAALLNFLKVNVEDSPMVAKAENVRIVPTFKIYKDGVKVKEMIC PSLHVLRYSVRHYAVSSS</aaseq>

Gene Sequence

<dnaseqindica>130..140#3134..3149#3241..3402#ggtggtggttcatctcgccgcgggcgcgcacaaggtgggggcaaaagctgtgctgttcttgggggggtgtggttctatgcctgcttgcttgctcgggattggaggaggaggaggatttgaggggtgtaggtggcggcattgctgaggcggagagcgggagatccggcgatgtcggaggcggaccggatacgggtgcgcgcggcggcgctggcgctggacggcggcggcggcggcgcggtgcgggacaagccggacgcgaaggcggacgtgttcgccgatcttggctcgccggtgtccccgctgcgggcgcgggcgagcgtggcgacgtcgtcgtcgtcgtcgtccgggtcggctaagtcgccggcgccgtcgaatgccggggcgctggcgctggcgggcgggaggagccactccggcgagctgacggcggagagcacgcccccgcggctgcccgggcaccggcggtgcggatctggcccgttgatattctccggtgggagcagcggcgggagcggcggcggcggcggggaccgcgggagcacggcgagctcgccgatgactaatgcgctccccgcaggtaacatctgcccgtccgggcgcgtccccgtcgcggcggccgcgccgcccccgccgcgctcccgcccggacgtgctcggatccggcaccggcaactacggccacgggagcatcatgcgcggcggcggcggcatggcccccgcgaggagcagcattgactcctcgtcgtttcttggacacgctccgagatctccggcgaccttcccggcggcgtcgtcggcgagcagcgggagcctccaggatgtgacccgcctgggcaacgagtggtacaagaagggcaagcacgccgaggcgctgcggcactacgaccgcgccgtggccctctgccccgagagcgccgcgtgccgcgggaaccgcgccgccgcgctcgccggcctcggccgcctcgccgacgcgctccgcgactgcgaggaggcagtccgcctcgatccggccaacggccgcgcccacagccgcctcgccggcctctgcctccggtgagctctcctcctcctcccgcattgcttctttcttgcttccgatttcctccgacttcttcgtgcatggtgctgttgctttcttggatgtggatgctaagctcttttttcccgcgagcgagagcaacataaatctagcgtctttcctttttccttaagctaatctgatttcgatttaggattgctgctgctttgtgcggcatgcttgatcgtcactgttggttaatttcttttttattttttttacgcttgatgataggatgattaagaattccatctttttgcttacgcaacaattgattggtttgatttgtggttgtcgaaagctacaagcttgtgttggccatgaagtaaatgtgctgttaaagtggttccccatcacacattgctgatgaaaggggagcgtttgcttagctgtattttgtaagctttctttaggtgcattggatgtaggccacacaaagctgaaaattttgtcctagttttgttctgactcgcaagatgtctgattttacagttggaacaaccggtgtgatgtaatttttgctagaattgtagattaaaccgattggaccttgcattgtctcaggttggggatgattagcaaggcgaggaggcacttaacgcaggctgggcatctccatcaatctgatccttcggagtgggagaagctgcaggaggtggagatgcatcagggaagaagcatagatgccaggaaagtcggggattggaagagcgcgctgagggaagctgatgctgccattgctgctggagctgactcctctcggctggtaatgtcaagcataaggttgcaaggaattgttggtttgtagcaattcacactgagtttgctcttctgtgcagcttcttgcgataaggtcagaagcacttctccgtctccacaagttggaggaggctgactcgactcttgcaagtttgctgaaattggacagcgtgttgctgtatcggatgggagccaacccgtcaggcatgctagctgagtcatatgtctctattgtccgagcccaagtcgacatggcattgggaaggtgtgattctctaaccctagaataatgctcaattttccacattgcggttaaaatagattagcatgaatttgttattctgtattctacaggtttgatgctgctgtggaggcagctgataatgctagatttattgatcctggaaatgcggaagttggaatgattctaaataatgtcaaattagttgcaaaggctcgagcccaaggaaatgagctctataaagctgccaagttttctgatgcatctatagcatatagtgaagggctcaaatatgagccctcaaatccagtgctctattgcaatcgagcagcatgctgggggaagctagagcggtgggaaaaggctgttgatgactgtaacgaagcattaagaatacaacctaattacacaaaggcgcttttaaggcgagcttcatcctatgccaaggtaagcagcaatcatatgcattaaatgtttatttttgatagtggaattgagtaattggatattgtttccactctatgtacattatgttgaccttgttaactattatttagctcgagcgttgggctgattgtgtgcgggactatgaggtgcttcataaagagcttcctgctgatacagaggttgcagaagcactgttccatgctcaagttgcattgaagacaactcgtggtgaggatgtatcgaatatgaaatttggaggagaggttgagatggtaaccagtgtagaacaactccgtgctgccataggatcaccaggtgtgttattctctactagttcttttttttcccttgatctcataccctgaaattaactcattggtgctgctctggtagcatcctgaacaatccgaaatactgccttctttatattcttgaaacatgtgttttactaggtttatcataccagacttgcctattttgcaattgactgactattgaacaatttgctatatcttcaggggtgtctgttgtttacttcatgtcaatcatgaatcagcagtgcacactaattacaccttcggtgaactccctttgcagcgaatgcccctcgctgaatttcctaaaggtgagacacttgacatgtctccaatcaaatacatccaacaagtgcttataaatgacactaacaaatctgcattgtgtgtgcaaaacaacaggtaaatgttgaagatagccctatggtcgcgaaggcggagaacgtgcggatagtcccaacattcaagatatacaaagatggggtgaaggtgaaggaaatgatctgcccaagcttgcatgttctgcgctactcagtaaggcactatgccgtatctagttcttgagaagcagctggtaccgaaaaccccgatttcccgatttcattgatgcatagtgctcccctttcccccctatagccttttactgtcaaaacttgagatgatgttgtcagcctccaccagtcccacctcatttcatcagctgcacaataatttccctgacgagcatgagcataatgagctaaaattggtatatgtggaagagcctccccaattttccccccttgccccccattccattccccatctgttgttactccttttttaccgttcatatgccgaccccattcaattctttcaccttctgggctctttcacctcttgtatttgatacattttgctttaccttatagtccaatagaaccagccaaccctccttctcaagaagggcaagtttgtaatgttgtttagattagtagcatattatcatagaggagaggagggagggggagagggagttagagagggatgatggttgagattttcattacatgtaaataccatatagcaaaaacatcagaaatccaattgaaggattgcttccctggagaaatggtggtatcaaaaaaattttggaggttggaggaggttagtacaggagaggctagctgtcattttagcgaatcaagagagcttgttaattggtgcaggatgggtttaggggttggtgttaaaagaaagattggtgtcattttgctgcttctgctgctggtttgtggtgctgatacataatgctaccatttccatgaataaaacaatccaacattcttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0616300, RefSeq:Os01g0616300