Os01g0618900
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Contents
Annotated Information
Function
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Expression
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Evolution
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Structured Information
| Gene Name |
Os01g0618900 |
|---|---|
| Description |
Virulence factor, pectin lyase fold family protein |
| Version |
NM_001050129.1 GI:115438628 GeneID:4326618 |
| Length |
2004 bp |
| Definition |
Oryza sativa Japonica Group Os01g0618900, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:26287169..26289172 |
| Sequence Coding Region |
26287232..26287277,26287441..26287615,26288188..26288258,26288377..26289011 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:26287169..26289172 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:26287169..26289172 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgagtttgatccatggcaatggccttcaggatgttgtcattacaggcgataatggaactatcgatggccaaggcagtgcgtggtgggacatgtggaagaagggcacactacccttcactaggcctcacttactcgagctgatgaactcttctgatgttgtcgtctccaatgtggtcttccaggattcgccgttttggaacatccatcctgtttactgcagcaatgtggtgataagaaatgtgaccgtactagctccacatgactcacccaacactgatggaattgatccagattccagcagcaacgtctgcatcgaggactgctacatctcgacaggagatgatctgatcgccatcaagagtggctgggacgagtacggcatggcctacgggcgccccagctcgcacatcaccatccgccggatcaccggctcctcccccttcgccggcttcgctgtcgggagcgagacgtccggcggcgtggagcacgtcctcgcggagcacctcaacttcttcagctcggggttcggcatccacatcaagaccaacaccggcaggggagggttcatccggaacgtcaccgtctccgacgtgacgctggactccgtccgctacggcctgaggatcgccggcgatgtcggcgggcaccccgacgaccgctacgaccggaacgcgctccccgtcgtggacggcctgacgatcaagaacgtccagggccagaacatcagggaggcagggtcgatcaaggggatcgcgacgtcggccttctccaggatctgcctgtccaacgtgaagctcaacggcggcgcggcggtccggccgtggaagtgcgaggccgtcagcggggcggcgctcgacgtgcagccgtcgccgtgcacggagctgaccagcacgtccgggatgagcttctgtacaaattcgctgtga</cdnaseq> |
| Protein Sequence |
<aaseq>MSLIHGNGLQDVVITGDNGTIDGQGSAWWDMWKKGTLPFTRPHL LELMNSSDVVVSNVVFQDSPFWNIHPVYCSNVVIRNVTVLAPHDSPNTDGIDPDSSSN VCIEDCYISTGDDLIAIKSGWDEYGMAYGRPSSHITIRRITGSSPFAGFAVGSETSGG VEHVLAEHLNFFSSGFGIHIKTNTGRGGFIRNVTVSDVTLDSVRYGLRIAGDVGGHPD DRYDRNALPVVDGLTIKNVQGQNIREAGSIKGIATSAFSRICLSNVKLNGGAAVRPWK CEAVSGAALDVQPSPCTELTSTSGMSFCTNSL</aaseq> |
| Gene Sequence |
<dnaseqindica>64..109#273..447#1020..1090#1209..1843#tggccgctgatcgaaccattgccgtcatatgggagagggcgtgagcttcccggtggaagatacatgagtttgatccatggcaatggccttcaggatgttgtcattacaggtcattactactcttcatgctccaacactcttgggctcttggcatttctattcataaattccatcacaggatgtttactgtttttagggaggggtatttctcagtccatcatgtgatggtctgctagttaagagattcatggaaattgcttttatttgtgcaggcgataatggaactatcgatggccaaggcagtgcgtggtgggacatgtggaagaagggcacactacccttcactaggcctcacttactcgagctgatgaactcttctgatgttgtcgtctccaatgtggtcttccaggattcgccgttttggaacatccatcctgtttactgcaggtgaggagaacatgttgctttcttagattagatcacatatatcacaatcctatgtttgcttcctaggagttcaaagagaggaagaacacttgcaaaacaatcacaattaaatttttagataatggaagtggattacatctccagcttctgtcatatgacacacatcaatcacaattaaatgtttcacgtttatcttacagtacgactgcttagcttttttttacctcataaacttgcttaaagggtactgcaaacgtatagcaggataacagttcatttatgtactgcctccatttgcaccatcatagactttatattaactccagtctggatacctgccttgtgataaacacataatagtactgcattgattggttctggtgactagtgaaccacaaccaaagtacagaagttgctatacatgaccaaacgatatcagtacattcatgtagtattgtgttttagtagtttgtaactatagtagtaataaacctgtggtccaaaaaatgtgtatttatggatgttccagctgagaaataaatgtccggatcatctcttgtgtgtgtgtgcagcaatgtggtgataagaaatgtgaccgtactagctccacatgactcacccaacactgatggaattgatccaggtaaattttattcttttcctcgtttcctcaccaaaattttgttctgaatgtatgttcaagaagataaaaacaaatgccgttcgatcttgaatctagaactaagctctgaattatgcagattccagcagcaacgtctgcatcgaggactgctacatctcgacaggagatgatctgatcgccatcaagagtggctgggacgagtacggcatggcctacgggcgccccagctcgcacatcaccatccgccggatcaccggctcctcccccttcgccggcttcgctgtcgggagcgagacgtccggcggcgtggagcacgtcctcgcggagcacctcaacttcttcagctcggggttcggcatccacatcaagaccaacaccggcaggggagggttcatccggaacgtcaccgtctccgacgtgacgctggactccgtccgctacggcctgaggatcgccggcgatgtcggcgggcaccccgacgaccgctacgaccggaacgcgctccccgtcgtggacggcctgacgatcaagaacgtccagggccagaacatcagggaggcagggtcgatcaaggggatcgcgacgtcggccttctccaggatctgcctgtccaacgtgaagctcaacggcggcgcggcggtccggccgtggaagtgcgaggccgtcagcggggcggcgctcgacgtgcagccgtcgccgtgcacggagctgaccagcacgtccgggatgagcttctgtacaaattcgctgtgaactgaaactgtcaagcgtgcatgttcaggggccaagttgttctataattatcaaggcggtttttttctatcgatgaggcaatgagcgtgttatgttggtaacgcccatcaaagatatgctaaacatttaatcattcgtcagagtatatgagtaattctccg</dnaseqindica> |
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