Os01g0681400

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Annotated Information

Function

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Expression

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Evolution

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References

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Structured Information

Gene Name

Os01g0681400

Description

Similar to Autophagy protein beclin1

Version

NM_001050415.1 GI:115439200 GeneID:4324394

Length

5714 bp

Definition

Oryza sativa Japonica Group Os01g0681400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29826561..29832274

Sequence Coding Region

29826968..29827151,29827448..29827597,29827913..29827984,29828494..29828579,29828657..29828815
,29829506..29829554,29829938..29830062,29830422..29830592,29830810..29831159
,29831910..29832066

Expression

GEO Profiles:Os01g0681400

Genome Context

<gbrowseImage1> name=NC_008394:29826561..29832274 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29826561..29832274 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggcccccgccgcggccgcggccgcggtcggcaacagggctggtggggtggatccgtcgattccgcggttcaagtgccaggagtgccaccgcgcgctcgtcgtcgtcggcgtggattccttcgccgataagctcccggctcaggccacctctgcgcatgcatcctctgttcatggaagtattatgggagctagcaggatggataattcttatgtcgtgctatccaagcaaaacaaatctcatggccatggaattcccccacgcccaccaagtgcagcagccccacatatcgaacctaaccagccaacaagagcgatggagggttcatatatagtgcttccacctgctgctgcttccatatacaagacatctacttctgaaggaggtggtgcgcagttgccaccaccaagtatcaattccagtagtttgttaccaggaaatagttttcactctaacgtgactgtattaaaacgggcatttgagattgctacgtcacaaactcaggttgagcagccaatgtgtctggactgtatgaggttgctctctgataagatggataaggagattgaagatgttaatgctgacattaaagcttatgaagtctgtcttcaacatttggagcaggaatcccacactgtcctcagcgatgctggttttcagaaggagaaactgaagattgaagaagaagaaaagaagcttaacgccgctattgaagaagctgaaaagcaatattcagaaattagttctgagatgaaggatcttgaaataaaatctaaagaatttgaagaattggaagaaaggtattggcatgaattcaatagctttcagtttcagttgacatctcaccaggaagaaagagatgcaattttggccaaaatagaagtttcacaggttcatttggaattgctgaagcaaacaaatgttctcaatgatgcattctatatttcacatgatggagtaattggaacaataaacaacttccgactcggacgccttcctaatgtacaggttgaatgggatgagataaatgctgcttggggtcaggctgctcttcttttgcataccatggctcagtacttcaccccaaaatttgagtaccggattaagattcaccctatgggtagctacccaagagtcacagatatccacaaaaatacatatgaactgtttggtcccgtgaatttattctggagcacacgttttgacaaagccatgacatggtttctaacctgcctgcaagattttgctgagttcgctattagcttggataaagagaacaatgtaccacctgagaagtcattaaagctcccatacaagattgatggtgacaaggtagggagccacacaatcttcttaagttttaataaagtggagaactggacgaaagcactaaaatacacgctgtgcaacttgaagtgggtcctctactggtttatcggcaatacgagtttcgcaccaccatctggatctttgtgtgcagcgcaatcatctaagagatga</cdnaseq>

Protein Sequence

<aaseq>MKAPAAAAAAVGNRAGGVDPSIPRFKCQECHRALVVVGVDSFAD KLPAQATSAHASSVHGSIMGASRMDNSYVVLSKQNKSHGHGIPPRPPSAAAPHIEPNQ PTRAMEGSYIVLPPAAASIYKTSTSEGGGAQLPPPSINSSSLLPGNSFHSNVTVLKRA FEIATSQTQVEQPMCLDCMRLLSDKMDKEIEDVNADIKAYEVCLQHLEQESHTVLSDA GFQKEKLKIEEEEKKLNAAIEEAEKQYSEISSEMKDLEIKSKEFEELEERYWHEFNSF QFQLTSHQEERDAILAKIEVSQVHLELLKQTNVLNDAFYISHDGVIGTINNFRLGRLP NVQVEWDEINAAWGQAALLLHTMAQYFTPKFEYRIKIHPMGSYPRVTDIHKNTYELFG PVNLFWSTRFDKAMTWFLTCLQDFAEFAISLDKENNVPPEKSLKLPYKIDGDKVGSHT IFLSFNKVENWTKALKYTLCNLKWVLYWFIGNTSFAPPSGSLCAAQSSKR</aaseq>

Gene Sequence

<dnaseqindica>5124..5307#4678..4827#4291..4362#3696..3781#3460..3618#2721..2769#2213..2337#1683..1853#1116..1465#209..365#agtattatgttattatccctgacaggtgggctccacgtgtcagcgactgtttgctcgttgctgtttgctcccgcgacgacgaatccgtgccgacctcgcttccccgccggccgccatgaaattggagcttccgagaggagaaaatctcgagaagtagagagagaaaaccacagcgtgagcgagcgtgggcgtccttgattccggcgacatgaaggcccccgccgcggccgcggccgcggtcggcaacagggctggtggggtggatccgtcgattccgcggttcaagtgccaggagtgccaccgcgcgctcgtcgtcgtcggcgtggattccttcgccgataagctcccggctcaggccacctctggtacccttacgccctgtccgattcgcttcctgtcccttccctacctccggggaaaattgggcatatgattgaattgttaggaattagtgtagttctctttaagtaaaaacctaggtttgtattgggttatattagttgccgaatttctgatgaaatgagtagttgtttgttggttctagacaaatggaatccaatactgatatcgaaatatatgcattgttgagttgaatgcataagtgcaattttgttcgatttgatagtgcgacggtgagaactttacagtgcttactgaaattactgttgggattgcggattcctgtaaagctgaagttcctgtttctggtgtagtggtgtgtgtttatggtttttcctggcattactgatttgaattgaaagttggaacttaaaactactgtagtcttcgtaatggtggcagcatggtttacttagtttacgtggtatatgcttctgttgccactcttatcttcctgtggactagaggtattactctagtgtttatcagtctaatgtttatacctgcaagtttccacccaagataaatcatagaccatttcgtcatatactcagatcgaatatttttatcatttattatggctccaccacttcttgcttcgttttctctacatgttttcttttatgtaaactaatgcatcatttgtgccagagatttgtcttgaaagtaattgttagctttcagtttcttcaaagtcattgttcctatctatgcagcgcatgcatcctctgttcatggaagtattatgggagctagcaggatggataattcttatgtcgtgctatccaagcaaaacaaatctcatggccatggaattcccccacgcccaccaagtgcagcagccccacatatcgaacctaaccagccaacaagagcgatggagggttcatatatagtgcttccacctgctgctgcttccatatacaagacatctacttctgaaggaggtggtgcgcagttgccaccaccaagtatcaattccagtagtttgttaccaggaaatagttttcactctaacgtgactgtattaaaacgggcatttgagattgctacgtcacaaactcaggtacaatgcttgcttaatctgtctctatattattgaatgtctgggctcgcatgcatttgcaatttctgcaatttacttgctgctgcaattattgcatcgtaattctctctttttttgtgtgtgttgtatgtgggaagtacatttatttgcgtgacttgatggctcattgttaaatgttatatgctgataatgatgtaaatctgcaatgtacttgcaggttgagcagccaatgtgtctggactgtatgaggttgctctctgataagatggataaggagattgaagatgttaatgctgacattaaagcttatgaagtctgtcttcaacatttggagcaggaatcccacactgtcctcagcgatgctggttttcagaaggagaaactgaaggtgacaatctcttttacatatgtatgatcagctggtgattaacgatattagaaatgcaggagagcgtgctgcttgggacaatataagagaagacagaagatttagtttcttctgtataccaatcatgtacaatgtagtttaaatgaaaattaattcctcttcaacctccatcaaagaggatgcatgtcggtttagaaggacattaaaagtgtagtcttgaagaagttgcccaatagttctgtaaaaaaccttgcttgcatgataaaaaaaatagactcaacaatagtttattttgaactgatcgatggccattattttcttggaactaaacgactttgtgtttgtgccattgatttcagattgaagaagaagaaaagaagcttaacgccgctattgaagaagctgaaaagcaatattcagaaattagttctgagatgaaggatcttgaaataaaatctaaagaatttgaagaattggaagaaaggtcagttacctttccattatgttcttgttattacctcagaagtttgtctacaggggtcaggatgcagagtctcagattatttttaattcaattttgcgtgtgagtcctgatcgtgcttttttttttctttatgatgaattctggcctagaatactgtatgaatatatcagtgttacattaaaaaatattagtatattttgctcttgaaactaaaacagctcgtttctattcaaaagataacactgccacaaacacagtattatcgtattgctacaacaattatccggtggtttgtgcaatccgtaactactatgttggctatgttattcgcagagttcctgttacttgtcaaacaaagctgatgtattatatttttgaaacaggtattggcatgaattcaatagctttcagtttcagttgacatctcaccaggtatatgcctactgcaggccctataaatatctactccctctgtcccaaaatatataagcatttttagaatagtgccaagtcaaacattttaaattttgactattgatagcaaaataataaaaaaagatcaatcgtgtaaaattggtgtttctagatttatcattaaacaaactatcataatatgcaactctttttatttaaaacatattacttttatagatattgttggtcaaagtagcatcttgaagaccgtgtcaaagtccaaaaatgcttatattttgggacggatggagtacttatagaatagcatattagcaattcattattttatcaacatcttttttggtatctactcaagagtgtacagacaagcaggacgtgcattctgtcccagatctgtcatatagctcacgcagtataaaccaagtctatgcctttatggctctatggttgattttgtgatcccgtattctgttggcaaaacataaatcgcttttagaaagttttattgtttatgccttatgcatactatctgcattatcgtgctttacactgccttcttgtttgaaaatactatctttagttttggttccttatctatgtgtatgctttctgatggctaagctgtatgccaacttttatctttgatacttagaaatcgttgactaaatttttcgcttcactattcaggaagaaagagatgcaattttggccaaaatagaagtttcacaggttcatttggaattgctgaagcaaacaaatgttctcaatgatgcattctatatttcacatgatggagtaattggaacaataaacaacttccgactcggacgccttcctaatgtacaggtaattatgcaaaatttacagatataccacatctcatgtttgatcctttgttaataaatctgatacccttttcttaggttgaatgggatgagataaatgctgcttggggtcaggctgctcttcttttgcataccatggctcagtacttcaccccaaaatttgagtatccttgacatattgatgactatttattttactacaattaatccattggtcattcttttgagaaggaattcccattgatcttcccttcatcaactagttacacttatgccacatgtttcaatgcattttagtagttactccatgtagttatcctttgtcctttttatacggaaactttatcaatgaggcttaacctttgtactaggaagtgtgttatgaaactttggtttatgagactgttcatgagaaagatctggcacagatgtataagtccaaactaggaagaacaaaaggtgttatagcaatttggaaagatagtggatgcacatcaacccctcttatattgtatttcatgataggtgttgcttaagtttttcagaagttcttcttatctctcatcagtgatgtttcacaagtgcatattcaggctaaatggaaatttaaacttaattgaaggtgttcatataaacgatgacttctctttggagttcctgaacttttttctaggtaccggattaagattcaccctatgggtagctacccaagagtcacagatatccacaaaaatacatatgaactgtacgtttccccctggctaattagtattcctgtttttctttttctaaaatgaacttccagaagatttgtaatgtagcttttctaaggttcataatatgtttatctgatcattggtattgactataatttacaagaacattttgtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtagtaagaggaggaaggggttgtgcactttctatatttgccctatttactgacagtttgctctgggtgtgcatttttcatatttgttgtccctttgttgagcactgcagttatatcatgctaaccaggtttggtcccgtgaatttattctggagcacacgttttgacaaagccatgacatggtttctaacctgcctgcaagattttgctgagttcgctattagcttggataaagagaacaatgtaccacctgagaagtcattaaagctcccatacaagtaagatatatttcaactttatggtactgtgttacttttgaaattgagtacattttattatatgaattgcatggttcatgcttacaagttacaacacttcttctatactattgtacttagaataaaatgtgctcatcagtcatcattgaggatacttaagatggggaaggattgtgattgcaatgttctctttccttcatatgataattttacttatataagcaagagcattcctacgttatgcaagcattttcacctgtgctactgctaatttaaattactactctgtttcgcaggattgatggtgacaaggtagggagccacacaatcttcttaagttttaataaagtggagaactggacgaaagcactaaaatacacgctgtgcaacttgaagtgggtcctctactggtttatcggcaatacgagtttcgcaccaccatctggatctttgtgtgcagcgcaatcatctaagagatgatgatgtcactgacctattaaggtggtgtttggatccagggacttaactttagtccctatatttagacactaatttagagtattagatatagactacttacaaaactaattacataaatgaaagctaattcgcgagacaaatttttaagcctaattaatccataattagagaatgtttactgtagcatcacataggctaattatggattaattagactcaatagattcgtctcgcgaattagtctaagattatgaatgggttttattaatagtctacgtttaatatttgtaattagtgtccaaacatccaatgtgataaggacttgaaagttttagtcccatctaaacatggtctaaactgattgtagccgcacattgaacagatagtagcattgacgtgacatattc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0681400, RefSeq:Os01g0681400