Os02g0147500

From RiceWiki
Revision as of 19:08, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0147500

Description

Conserved hypothetical protein

Version

NM_001052419.2 GI:297598590 GeneID:4328292

Length

3403 bp

Definition

Oryza sativa Japonica Group Os02g0147500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:2606705..2610107

Sequence Coding Region

2606705..2606940,2607027..2607371,2607766..2608612,2608842..2608910,2609973..2610107

Expression

GEO Profiles:Os02g0147500

Genome Context

<gbrowseImage1> name=NC_008395:2606705..2610107 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:2606705..2610107 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgggtgctcgtcgtgaagggccgcgccgtggtggcggagaccatcggttgctgctgccgcaccgccgccgccgctgccgccgccggcgagacagcgcactttctcttcaccgccgagggcatccatcaccgtagcttctcttccacccctccccctccgccgcgtcctcacgtcgtcgggtcgtcgtcgtcgtcgtcgtcgtcgtcactttgggccggcgatcacagcgacaggtggcatggaatcggcggcgaggtgcagaggaaacgcgagtacgagggccacgttggcggcggaggcgccatggcgactccccgattcaaggaggaagacctggggctgcgcgtgatctcgcttggcaaatgcagccgccacctcgttcacgcgcccaggtccgcctggttcatgctccacgcgccgtcgaggcgaagcttctcgacctcggcgtcctcctcgccgtgcacttcgccacccgcgccgcctgagaccagtccgccgaacacttcgacacccgcgccgcctgctccagatgtgccagagaacagttcgccgccggattatgatctctgctcagacaggtgctccttaggtgatatgcttgaagcgtcctatgatcctgtagagttcgtgcgcaactttccagcagtaatgttcagcaagccgaagaacgcccctgacactttgtacgatagatgggttttcaaaggctggttccaatctgctataagagacattttgagcaaactagaggatcatcacatagccggtctggagtttgaagatattaatactgagaccatgacaatagcttgcaatattgattcaagcgagttctatcccaggttcaattttcatgggaagaccaggaacattacttttgaaggacagaaaagaaattacactcagcttggcagcacccttgagaaattgatagccatctcagcaagtgctagtaatgtccatgcatatcatcatcaactcttgactgaagacgctaaagacttgctgaacaaaatgaggcatccttcccttgatcgttttgaggcatacatgctcagaaaccacccatctttacttcagatcgaagcgcatgcctctttctaccttacctgctttgatcacctgaagctattgcctcaaaagcctgttgaaaacttcttcaaaggactgccatacgcggtaggagaccagcatggcgattggattgcaattgcacatcaacacccgcttcttagcatgcagttaagccatggatatagaatcagcaactggtcgcaggcaacgtataggagggacgggtactgtcatagaactgaacctggatctaagtattcgatcgttcaaacgcacaggatatatcaccagtatttccctaggacactcccagctatgatgtggggaatggtggctctacgtcagcacaagggacaacgtacagttgatgttcggttcacactcaacagtcctgttcctgttttctttgacaaggacaaagcagtcgccggcgagcaggatgccgcacggccgcagcggcagcgcgcagccgccggctgcctcgggcctcggcgcggaacggcggacgccgacctgcaggctgcagctgtgcagcgcctgctcctgctcggctga</cdnaseq>

Protein Sequence

<aaseq>MRVLVVKGRAVVAETIGCCCRTAAAAAAAGETAHFLFTAEGIHH RSFSSTPPPPPRPHVVGSSSSSSSSSLWAGDHSDRWHGIGGEVQRKREYEGHVGGGGA MATPRFKEEDLGLRVISLGKCSRHLVHAPRSAWFMLHAPSRRSFSTSASSSPCTSPPA PPETSPPNTSTPAPPAPDVPENSSPPDYDLCSDRCSLGDMLEASYDPVEFVRNFPAVM FSKPKNAPDTLYDRWVFKGWFQSAIRDILSKLEDHHIAGLEFEDINTETMTIACNIDS SEFYPRFNFHGKTRNITFEGQKRNYTQLGSTLEKLIAISASASNVHAYHHQLLTEDAK DLLNKMRHPSLDRFEAYMLRNHPSLLQIEAHASFYLTCFDHLKLLPQKPVENFFKGLP YAVGDQHGDWIAIAHQHPLLSMQLSHGYRISNWSQATYRRDGYCHRTEPGSKYSIVQT HRIYHQYFPRTLPAMMWGMVALRQHKGQRTVDVRFTLNSPVPVFFDKDKAVAGEQDAA RPQRQRAAAGCLGPRRGTADADLQAAAVQRLLLLG</aaseq>

Gene Sequence

<dnaseqindica>1..236#323..667#1062..1908#2138..2206#3269..3403#atgcgggtgctcgtcgtgaagggccgcgccgtggtggcggagaccatcggttgctgctgccgcaccgccgccgccgctgccgccgccggcgagacagcgcactttctcttcaccgccgagggcatccatcaccgtagcttctcttccacccctccccctccgccgcgtcctcacgtcgtcgggtcgtcgtcgtcgtcgtcgtcgtcgtcactttgggccggcgatcacagcgacaggtacggctccttctcatcacatcaccgttccttccgcaatccgcaccccgtgtttccgagtgttctgaaataacagtgcgcttcaggtggcatggaatcggcggcgaggtgcagaggaaacgcgagtacgagggccacgttggcggcggaggcgccatggcgactccccgattcaaggaggaagacctggggctgcgcgtgatctcgcttggcaaatgcagccgccacctcgttcacgcgcccaggtccgcctggttcatgctccacgcgccgtcgaggcgaagcttctcgacctcggcgtcctcctcgccgtgcacttcgccacccgcgccgcctgagaccagtccgccgaacacttcgacacccgcgccgcctgctccagatgtgccagagaacagttcgccgccggattatgatctctgctcagacaggttcgcgcaccaatccaccattgtttgtttggctgcgtgagattgcattgtgtgtgattactgcaactgtcaatttggatgtgagattgcattattaattattttgtgcgattacttgaattgttagtttagctgtgtgagatttcattattaattattgtgtgctattactgcaattattagtttgtctgtgtgagattgcattgtgtgtgattactgcaactgttagtttgctgtgagattgcattattaactattttgtgcgattacttgaattgttagtttagctgtgtgagatttcattattaattattgtgtgctattactgcacttgttagtttggatgtgtgagattgcattattgatcactgtgtgcaattactacatattgcaggtgctccttaggtgatatgcttgaagcgtcctatgatcctgtagagttcgtgcgcaactttccagcagtaatgttcagcaagccgaagaacgcccctgacactttgtacgatagatgggttttcaaaggctggttccaatctgctataagagacattttgagcaaactagaggatcatcacatagccggtctggagtttgaagatattaatactgagaccatgacaatagcttgcaatattgattcaagcgagttctatcccaggttcaattttcatgggaagaccaggaacattacttttgaaggacagaaaagaaattacactcagcttggcagcacccttgagaaattgatagccatctcagcaagtgctagtaatgtccatgcatatcatcatcaactcttgactgaagacgctaaagacttgctgaacaaaatgaggcatccttcccttgatcgttttgaggcatacatgctcagaaaccacccatctttacttcagatcgaagcgcatgcctctttctaccttacctgctttgatcacctgaagctattgcctcaaaagcctgttgaaaacttcttcaaaggactgccatacgcggtaggagaccagcatggcgattggattgcaattgcacatcaacacccgcttcttagcatgcagttaagccatggatatagaatcagcaactggtcgcaggcaacgtataggagggacgggtactgtcatagaactgaacctggatctaagtattcgatcgttcaaacgcacaggatatatcaccagtatttccctaggacactcccagctatgatgtggggaatggtggctctacgtcagcacaaggtgatagattttgacaggttattcaaatgaggggaacggctagccaggtaaaggtcagcagttcattcccctttcattatagtaggtcattgtgctctctgatctcctgtagtacatgaaacaagattttactaactgaaataccttttgctttgcttggtataggtatatcttgggagacaattgcatagcttctcgatgaaccaccctgttcctgttgctttgacagggacaacgtacagttgatgttcggttcacactcaacagtcctgttcctgttttctttgacaaggacaaagtacgggttgatgttccgttgacacagtagtcaattcgcagtatctgtactgcaggcatacaaattcgatgtcaaagccccatgctctgtggttacattgcctttgttagtacatctaccactgttcattttactaactgctagtaaaaacatctaatggtatcagattgtcagttttggaagaatgattacacagaattaagtttggtgttttgtttggtttatagccttagttaaaatatttctgtaagccaaatacgagcgttgcaaaatttgtgacgaagttaggtttgttgccaatttttcttggtaaaattgctttgagcattgtttaatttgagatcaattagagactaaacaatgtacactaccatttcattttctgttggcaacaaaccaaatgtgtttgccaaattgccagtggcgggcccagctttttaaacttgggtattcgaaatgggaaggggtaaaaaaatgtccatacaccaaaaagccaaaaaataggcttgtatattatgatacactaataattataatttagagcgtatagaataaaattgatcattagttcacacagtgatagaattgatcatcactagaaattgtttaacttatagaaatactaataccaaacatatcaaagtgtcaaaatatggaatacaaaaatgatagagaataataagttaggaagaaaacttacaatttagatattaacttttcgacgcttgatattttggaaataattgatgatgtccttgtccttagcttgcaaaaagaattctctttcaatgaatgtaaccaaacaatcattcaaatactacaaatttgctaatatggtatgaactatgaactactgtccagtgtccaatatactcaattactcaaatactcaaataggcaactagtcaactacaatcctacaaactaaatgtctaaatcaagcaagcaagcaactacactaaaatactaaatgtctaaatcaatgaatttttgtgcttgtcccgttgtccggagtttagtcactcactgtgctaatgtgcttatccggaatttgcaggtcaggcagtcgccggcgagcaggatgccgcacggccgcagcggcagcgcgcagccgccggctgcctcgggcctcggcgcggaacggcggacgccgacctgcaggctgcagctgtgcagcgcctgctcctgctcggctga</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0147500, RefSeq:Os02g0147500