Os02g0199300

From RiceWiki
Revision as of 19:10, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0199300

Description

Peptidylprolyl isomerase, FKBP-type domain containing protein

Version

NM_001052748.1 GI:115444866 GeneID:4328636

Length

1849 bp

Definition

Oryza sativa Japonica Group Os02g0199300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:5567953..5569801

Sequence Coding Region

5568149..5568226,5568396..5568466,5568602..5568647,5568765..5568825,5568957..5569050
,5569267..5569301,5569414..5569602,5569693..5569754

Expression

GEO Profiles:Os02g0199300

Genome Context

<gbrowseImage1> name=NC_008395:5567953..5569801 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:5567953..5569801 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcccgcgtcgctgacgagattgaccaacccgttgccgtgcgcctctccatctccaagatgccggcgccggccggggagatctccgccggcgagggcggcggcgtgcggggtggtttccaggaggagggcggtgtcggagatggcgattcttggcggcgccgccgcggccgcggcctcctgctgcgtcgatctcttcttcgcccacatgcctgcccgtgccgccacgctggagcctgatgtgatcaggtacagaaagctggacagtggagtgaagcttgaagatgttgtggatggcgagggtccagaagcacgtgaaggagatgtcgtgcaattcaactatgtgtgccgccgcgcaaatggttatttcgtgcatagcacggttgaccagtttagcggcgagagtaagccggtcacacttgcacttgatggaaaagagatgattcgaggtctcaaagacgtcatcgttggaatgaagacaggaggtaagaggagagctctgatacctcctcaagtaggttacactgatgagagcttgcagcccataccagaagagttcggtccacggcgaagcctcctgtcacatgccaaggagcctctggtgtttgaggttcagctgctcaaggtcctctga</cdnaseq>

Protein Sequence

<aaseq>MAPASLTRLTNPLPCASPSPRCRRRPGRSPPARAAACGVVSRRR AVSEMAILGGAAAAAASCCVDLFFAHMPARAATLEPDVIRYRKLDSGVKLEDVVDGEG PEAREGDVVQFNYVCRRANGYFVHSTVDQFSGESKPVTLALDGKEMIRGLKDVIVGMK TGGKRRALIPPQVGYTDESLQPIPEEFGPRRSLLSHAKEPLVFEVQLLKVL</aaseq>

Gene Sequence

<dnaseqindica>1576..1653#1336..1406#1155..1200#977..1037#752..845#501..535#200..388#48..109#acctcacaggcacaccatccaggcttcgcttcctccaatccacgacaatggcgcccgcgtcgctgacgagattgaccaacccgttgccgtgcgcctctccatctccaaggtaaatgcggcacgcggagaagttctcctggatgtgttcttttctcggggtctgagtttgcttgctgttcttgggcgcgctctcgatcagatgccggcgccggccggggagatctccgccggcgagggcggcggcgtgcggggtggtttccaggaggagggcggtgtcggagatggcgattcttggcggcgccgccgcggccgcggcctcctgctgcgtcgatctcttcttcgcccacatgcctgcccgtgccgccacgctggagcctgatgtgatcaggtgatcatgctcatctggttggtgttgatgagatcttttattgagatggaattttcgaatttcgatggtcactgaatccgatctgatttgatttcccttctgaagtcttcaggtacagaaagctggacagtggagtgaagcttgaaggtaaaatatacatacattgcaattactgttaccagtggttctaaaggatttgccattggacccacatgtcatagatacatgagatcctacatgtcatagacagcgagtggcaaatcattaattggcacatcttaagactatcaaataattgaatgtcccgtttttttatatctgtctgctcatgaaagaactcatgtttctccatatttgatcaagatgttgtggatggcgagggtccagaagcacgtgaaggagatgtcgtgcaattcaactatgtgtgccgccgcgcaaatggttatttcgtgcataggtgaggaaagatgacactgggtacaaattcagctcaagagacctcatgtcatgtacggattatcagtgtcagtacaatctgtccatgtccattcatttctttgatctcattagctgcactctgtgatccagcacggttgaccagtttagcggcgagagtaagccggtcacacttgcacttgatggaaaagaggttattaattagctccgctcctgaaaacttcgcatcattcagatatcctcacatttttcaacagttttgagttattctgatatctggtttaatagtcttgttttaagtcatttacagatgattcgaggtctcaaagacgtcatcgttggaatgaagacaggaggtaattagattgctgaattacagcatactgaaactctgcatgctaatcactttaagaacaatgtttttcatctctgaaaataccatggtttttaagcacattaacgttttccatctgttcatggcttgagtgtaggtaagaggagagctctgatacctcctcaagtaggttacactgatgagagcttgcagcccataccagaagaggtacaagttacaaaactacctgatgagctaagctgattgctgcaacatattcatcctgtgcatttttttctgtcgtttttccacttgatttgaactaagctgattgtttcaacatattccttgtctgtgattttgatcatatttgcacttaatttgattgcgatcgcagttcggtccacggcgaagcctcctgtcacatgccaaggagcctctggtgtttgaggttcagctgctcaaggtcctctgaccctgaatttttctgccattatctaatcatcacatcctatagtgttcactcttcaaagaatatgcatttctctttcagaataaactcagaaaactgtactgtttcatatgtataagatacagtgatcacttgctgatttgaaacgcaactagcagcaagttgaatcaatgaaagagacaatgaacagcttctagcc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0199300, RefSeq:Os02g0199300