Os02g0273100

From RiceWiki
Revision as of 19:12, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0273100

Description

Aminotransferase, class IV family protein

Version

NM_001053066.1 GI:115445502 GeneID:4328992

Length

4307 bp

Definition

Oryza sativa Japonica Group Os02g0273100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:9979652..9983958

Sequence Coding Region

9980186..9980280,9980430..9981103,9981302..9981480,9982478..9982533,9983720..9983885

Expression

GEO Profiles:Os02g0273100

Genome Context

<gbrowseImage1> name=NC_008395:9979652..9983958 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:9979652..9983958 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgatggcctctctctccaccccacctgctaccgccggcgtctccccgtcgccccgcccttccctcctcgcgtacaagaaggctgctgggctcaccccatctccatggtgcgggtggaggagggcggcggtggccaccgcagccacgagctccaatcggaccgctgcaccagccgagaccattgtcactggaaatgatgtccctctcttgtcttttgctgaggttgcagaaaggcttgatgaattccatgcatctggaaccagaaatcaaaattacatggccatgtactctagtatttttggtggaattaccacaaatccttctgcaatggtgataccaatcgatgatcacatggtccacagaggacatggtgtttttgatactgcagctattatgaatgggcacctctatgagttagagcagcatcttgaccgcttcctgaagtctgcatcaatggccaaaatcacgctgccttttgatcggtcaacaattcggagcatacttattcaaactgtgagtgcatcaaaatgcacccaaggatcactcaggtactggctatctgttggaccaggagacttccagctatcttcagctggttgtgcaaactcagccctgtatgctattgtcattgaaagtccatcgttaccagtaccagcaggatgcaaggtgatcacatcatcgataccgataaaatctcaacagtttgcggtcatgaaaagtgtaaactacctgccaaatgcactcactaaagtggaaggcgaagaaaatggtggattcaccggcatatggttggatgatgagggtttcgtagcagagggttccaacatgaatgttggcttcgtgacacaaagcaaggagctcctcatgccccgtttcgacaagatccttagcgggtgcacggcaaaacgggttctgacccttgccaagcagctagtggcagatggaaggctcagcgggatcagttcaaggaatgtgagtgtccaggaagggaaggcggctgatgagatgatgctcattggtagtggtattcttgtcaaacctgttgttcagtgggatgatcagataattggctcaggcaaagaaggcccaattgctcagatgcttttcaacctcattcttgaggacatgagatccggtccaccttcagtccgcatccctgtctcctattga</cdnaseq>

Protein Sequence

<aaseq>MMASLSTPPATAGVSPSPRPSLLAYKKAAGLTPSPWCGWRRAAV ATAATSSNRTAAPAETIVTGNDVPLLSFAEVAERLDEFHASGTRNQNYMAMYSSIFGG ITTNPSAMVIPIDDHMVHRGHGVFDTAAIMNGHLYELEQHLDRFLKSASMAKITLPFD RSTIRSILIQTVSASKCTQGSLRYWLSVGPGDFQLSSAGCANSALYAIVIESPSLPVP AGCKVITSSIPIKSQQFAVMKSVNYLPNALTKVEGEENGGFTGIWLDDEGFVAEGSNM NVGFVTQSKELLMPRFDKILSGCTAKRVLTLAKQLVADGRLSGISSRNVSVQEGKAAD EMMLIGSGILVKPVVQWDDQIIGSGKEGPIAQMLFNLILEDMRSGPPSVRIPVSY</aaseq>

Gene Sequence

<dnaseqindica>3679..3773#2856..3529#2479..2657#1426..1481#74..239#agtataatgccggcagcatctgaaacctgagactagagtctgtccattcctgcagttttgcccgtgtgtcctgatgatggcctctctctccaccccacctgctaccgccggcgtctccccgtcgccccgcccttccctcctcgcgtacaagaaggctgctgggctcaccccatctccatggtgcgggtggaggagggcggcggtggccaccgcagccacgagctccaatcggaccgctggttagtcttcctccttgggttctgctcgaattcgcgggttgggttctagtgctgatcgggttcttgcgcctgccatctcctaccttaggttggagccaaagagatggaaacttttttttgttctaaatccttctatcagttctgaattctgaggctaaaggttgcactcccgcttgttccagctcctcagtttgcagcttcaggttcaggataatggaggaatggatataagtgcggtacttgcattctgcattcttgttggtgcgggtcccagttcggattggggtactaagattttgcataagttcgaaaagtatcctagtgattccaggagatcatgcagtagttctgtcatgcagtctgctcttcaaatttgcatgtctgttcatagttgttcatagctctgtcaaatctgcatgcttgttcatagttctgtcaaacttgcatgtgtgttcataggttgatgaactgaactctatatggagtggtgggggaatgtggatattttttttccctggtataggtcttctgtgagcaactgcttttgaattttttagtaataacagtgaacttccaaggctggaaaggtattttggttgcgttctgagttctcatgctgatgaaattccgtggttggtttagtgacccgatctgatgatgatccttagagttgggctgatgcaatgcgaggacagtttcgttagtaaaaaactgcaatttgtagttcacaagattgtaacagtttgtcatggttccctgtcgctttcttagtggtctggatgtgcttgaaatagttggatatatgcaaaatgggctgatgtgaatatgaaagatcgtatctttatgattaaatatgaggtatgccctttgatgttgactttaaggttgctgccagggtgcttttttctttctttcttttttgttttagctagttttgaaagcaattcttggcatttgttgatagaatttttttgataggaaaatacctgtacatttttttgttaaaatatgattttcaaaaccttaaatgagccttgcatggttgtttttctcaccttaatgattcctcggtttagctctgatatcattgctttgttcttcatatagtgtgcttctaggagactatgatgccttttgttttcaataatgtttttcatgcaactaaacggtattcttttcactgcagcaccagccgagaccattgtcactggaaatgatgtccctctcttgtcttttgctgaggtggacttccttgtcttttctgtgtttgttggcaccactttcaataccatcttcgcacaatatttgcaagaagaagttggattctccttttgttttagagagatcgtcttgttctgattaccattcctcttgtcttaattaatcttcacttgactgatacctgattatctacctcatatagtacattgttatcatccactcaatttacatccatactagtatgtattaagattttttagaaccattttgctgcaaccacagtatgattagagcagcccaacgtttcaaaacactgtttcctctaggctttttttaagttgactacggtttaacagtccacagtagtgtgcaaatacatttgtggattacattgctgactttttattcaagagcaaaaacaacatatcacccttatatggagaatcggataaaaaaatttggagtaatcttcttttttgttgtaaatatatttgtatctttttaataatcatgtaccaaagtaggactactgttttccctaaaaagaagttaactctgtatattttctagcatcatttatattgctacaggtaagaatgtccaacaagtcctagttgaagccatgtcctagtagttgacatgagggtggtaactggtgacaacctttgagtatttgtttagtaactttgatcttgcagtttaacacaatcggatttgataggactctgaataacttaaattatgcaccaaaacactgataatctgaattgagccctttaacaagttccatctttggatatagttccagtcatgctgattactgtgtttcctatctctttgaagtattaattacaagtattactagttttcagagagaaggggtattcataacagtatgtggtttactatctgtctaagaggtgctcacgattcatgaaattatcaagcagagtaggatcttgtcttgaaaagtgctatgacaacagatatgtaaagtcaaaaactttttctcttataggttgcagaaaggcttgatgaattccatgcatctggaaccagaaatcaaaattacatggccatgtactctagtatttttggtggaattaccacaaatccttctgcaatggtgataccaatcgatgatcacatggtccacagaggacatggtgtttttgatactgcagctattatgaatgggtgagatctttgcttcaatcaattatgccaacccccaaaaaaacagatacttgactatcaataggaaatttgttttgtttttttagtgtgtggaaaattgtaagtgaacaagaagggatcattctttttactaaatttccattcagttctgatccaaacaccatattatcagtattaactttgtcatattactgtcaggcacctctatgagttagagcagcatcttgaccgcttcctgaagtctgcatcaatggccaaaatcacgctgccttttgatcggtcaacaattcggagcatacttattcaaactgtgagtgcatcaaaatgcacccaaggatcactcaggtactggctatctgttggaccaggagacttccagctatcttcagctggttgtgcaaactcagccctgtatgctattgtcattgaaagtccatcgttaccagtaccagcaggatgcaaggtgatcacatcatcgataccgataaaatctcaacagtttgcggtcatgaaaagtgtaaactacctgccaaatgcactcactaaagtggaaggcgaagaaaatggtggattcaccggcatatggttggatgatgagggtttcgtagcagagggttccaacatgaatgttggcttcgtgacacaaagcaaggagctcctcatgccccgtttcgacaagatccttagcgggtgcacggcaaaacgggttctgacccttgccaagcagctagtggcagatggaaggctcagcgggatcagttcaaggaatgtgagtgtccaggaagggaaggcggctgatgagatgatgctcattggtagtggtattcttgtcaaacctgttgttcagtgggatgatcagataattggctcaggtaaacagaatttcacccctgaaattcacctagctgtcgttgtttggaagagtatcattttgcactctgcaacagaaagtggatggcttttagcccttcaatggcttcctgtaaacttcatgctaatttctttccttgttctaacacaggcaaagaaggcccaattgctcagatgcttttcaacctcattcttgaggacatgagatccggtccaccttcagtccgcatccctgtctcctattgaaactgctgacatctcaccgatctttctacagatatgtgataaataacagaacatgtattattaggaacaaggaacgattactagaattctgagactagtcacgtaaagctacactctatatttgcataattcagaaggtgtgttcttcagttgcaaccttgtgctctcagacatcttaatcctgaatttaaagctttgctatccagatgctacaccaagcaaggggggcaaggattttggtagctgttgatcaatgtagagaagatgtggatattgtacaaagaaacctgtgaaactgttaaatttgtacaggttttattatgtcttgagtacctcatactgcagcacagactcacagaggatggcttgcaagccacagattgccagaaccttgagctcaagccaccgaactaagtcagtttattatgttttacctttattcagaaggaatagttccgattcagcaacatcaacttgattcagagctactgcttctttctttggtaagctatggctttgtatttgattaatctt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0273100, RefSeq:Os02g0273100