Os02g0317700

From RiceWiki
Revision as of 19:13, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0317700

Description

Conserved hypothetical protein

Version

NM_001053209.1 GI:115445788 GeneID:4329154

Length

5142 bp

Definition

Oryza sativa Japonica Group Os02g0317700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:12649370..12654511

Sequence Coding Region

12649442..12649962,12650220..12650298,12653436..12653501,12653952..12654020,12654203..12654211

Expression

GEO Profiles:Os02g0317700

Genome Context

<gbrowseImage1> name=NC_008395:12649370..12654511 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:12649370..12654511 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctgctggtcccccaaccccccatctccaagctctttctctccctgctggctccccatcttcacctcgtggcggcatctggtcatgcacctcggccacagcgcagctcgagcagtcgacggggtggagtggcctcggcagcggcacggattggactcggcgacggtggtatacttccggtcagtctctcgtccggatctacttccgacaagcctctcgtccggatctagggccttgcagcggtaatcactggatctggggtctccgcggctggatgccctctcctgcttcgtcgttgcggtggcaatcaccagatctggggcctctgcgcctggattcggttgatgggagttttggagcgaggatggaggtgtgtttgagaataatcacccctcgtctgctgactcgtccccatcgcccgaccggtccacggggttccaggcaacatgcatcgcggcgtctcggcatggagggtgcacagtgttggggttcagctacggcagcttcgtggtgttcgttgcctgctgtggggtgctttgtgttgtggatagtgggcgtggaccagaagctgattatgtgttttcaccgcgcgaaattggatccaagagtggggatggtgatgcagatggcgtggtaccagcatcaagcatgtgtgatggagctgtgcatttatattgtgataggaactcagaaacttcaactaccaagacaggagatcaagatgtctagaatggcattgtga</cdnaseq>

Protein Sequence

<aaseq>MPAGPPTPHLQALSLPAGSPSSPRGGIWSCTSATAQLEQSTGWS GLGSGTDWTRRRWYTSGQSLVRIYFRQASRPDLGPCSGNHWIWGLRGWMPSPASSLRW QSPDLGPLRLDSVDGSFGARMEVCLRIITPRLLTRPHRPTGPRGSRQHASRRLGMEGA QCWGSATAASWCSLPAVGCFVLWIVGVDQKLIMCFHRAKLDPRVGMVMQMAWYQHQAC VMELCIYIVIGTQKLQLPRQEIKMSRMAL</aaseq>

Gene Sequence

<dnaseqindica>73..593#851..929#4067..4132#4583..4651#4834..4842#atgtactcctgtttcccccaattccttcccaccaccggccacctctagcgtatcgcctggtccttccatgccatgcctgctggtcccccaaccccccatctccaagctctttctctccctgctggctccccatcttcacctcgtggcggcatctggtcatgcacctcggccacagcgcagctcgagcagtcgacggggtggagtggcctcggcagcggcacggattggactcggcgacggtggtatacttccggtcagtctctcgtccggatctacttccgacaagcctctcgtccggatctagggccttgcagcggtaatcactggatctggggtctccgcggctggatgccctctcctgcttcgtcgttgcggtggcaatcaccagatctggggcctctgcgcctggattcggttgatgggagttttggagcgaggatggaggtgtgtttgagaataatcacccctcgtctgctgactcgtccccatcgcccgaccggtccacggggttccaggcaacatgcatcgcggcgtctcggcatggagggtgcacagtgttggggttcagctacggcagcttcgtggtgttcgttgtaagtttgtactaactattagtaatcttgtcaaattaagttcgaactaattaaggtcgtcctttccactacttaattgagaatacttgaactcaattcttattctgcttataaaacacattaactaattaagctcatgtaaagcatgcacagcgatggaactttttgtgagcagaagaagcaacttgtttttccctgtagacttttgaattgacacaatgtattctgtcaaggtactgaaccacatccttttgtaggcctgctgtggggtgctttgtgttgtggatagtgggcgtggaccagaagctgattatgtgttttcaccgcgcgaaattggtaagctctacggactcttgaactactataagttatttagataatcatgaaaagatacatgtctgattaatcaggtagtcaattatctatttctttgaggtgatacatagaagcatgtctcttacaccttgaggcatactgctctcacattcattctcttggtacgccaatagttctactaagaaatgcttccttagctcatatccatcctgtatatgcatttatttatgtaagcgaacaaggttagcactgtatgtgtaaaaaggtagtagcatttaaatagtcaatgctaagtgtcacgatacttgcctttataattggtaactgcaattcttcatcattccatttgcgcatgaagagggacacaagataaccagatagttcgctaagaaaaatttaattgttaattaattttgttttagggaaataaattaactggttgtacaatggagtttaaaagaaagtttacccgttgttaattggaacatttggtagaattatttgacgccataggttgatatcctcgttccatcttgacccaaggcatgcttttgccattgcttttggcaagtgtttggcaatccatagtagttttttgacatatcttgcatttgggttgttctcataaattggttcaagcggagtcgggtctaatatatagacgattctggtatcttggtccaatacgatcaaaatgaaaaatttatagaattctattggcataagaatctgtaaaagctaactgttaggatagaaaaaaatcatggccatgatgagcaaatggaagagaacttaccaatctgcattttgaaatattgtagtcaatcccaggccaattacaaactgactttgctagccgttcagtgtcgagcttttgacgaaagtttgggtgttgtccaaaattggtagtcatctttgtatataattgtgcaaaaatgatatacaacatgagacaaaggggataatacatgtgattataaaggcatactcaaaattgcaaaacggaataatacacgtgattgtaaaaacatacccaaaattgcatgtctagatagtgttttgatattgttccctttatctttttcaccatttggatgtcgtcgtatacatgaatctgtgaataacatcacattagaagagagcgacatatgtaaacatgtatggtaacaaaacatgatgttgaaggcaaaaatatatgaaatactaacctgggttattgtcattgttgtcgttgtttttgcgattacgacgagccttcagcacatcttccaggttaacaccaaactttggtatatcggtatgccaacccaattcacctctaggaaagaatagtggataagacaatggatcatagcatccatagtacgaccggatgccttctatttcattgtttcattgttgttcccttgtaggattacactcttgtcaaatgtctttcgtcgctcatttccctcgacccaaactgcagccacctctgaagttattggcgcgttatacgtcctctgatccaaccattggtcaaggttcaatatcacacggtagtcctcgagattctcggcttgccccaaactcctaaactgctcagagtatggattaccacgtagaatgttagttatagtgctgattactttttgatcttgttcgtatagatctggccgacaatgacggtaccgatgctctagggtaggatcatcatcgtaaaagtacaattccagacgcttagggtttgaaccatcagtaccgaatgaacgtatattgtgatacatctggccatgagctcaaaacgtgtaaataccactattcctgatgtcagttatctctctgtcaaggtgacagtaaagagatgtgaatgagaaatgtccattgaaaaatcttatgttgttgcggaaatgttgggcatctgaatcttcgctcgtccacagtctcgtgagttcaggaggtgtgtcttgattggctagtttgatttgtccacttcggcaacagaagccctttgactcatactcaaacttctttttgcaccacaaaatccacaattttctacgggtttcagcatatgagtgctttgtggtaagttgctgtacacgatcttgtctagatcagggatgctagggctctcagtgatggcatcgacaacatctatgatttgtatgtcctgatcttcctcccaacctggaaagttttagtgccaagatataagtttacgtttgacatgatggtggcgaacagcgacaaaattaccttgatcatcaagcatgtcgctttcctcatcagtatcatcgtcaaatatgacctcaccatcggctgcataaaaaatcagtacgtgcatatgtagattaaggccctaactgtatcaaatcaaaataaaatcaaatagagatgacaatgttaccatcatcattgatgtgactgtgatggaggctctacaccattggttcctttagatattgtagacatgttattgtctattgaaagaagatggttagtagtacaccaggatacattgcagtacaacataaagtaagtgtatatagctaggatcctcaccaatgttcattacgcttggttgattagaagggtctacgccactgactggttgggcgcttatggaaggatcttctaattctaacaaggcagaagtacttttgtctcgtctaaccatgaagctttcgttgcgacgtgccatcaatgcatgtctttctccatgcgttacacattttttttggtgatcttgttgggacagggggtgacatatccgtcgtgatatacccagggttctccattgctatggaatatttacttggattgttgcgccgtgatgcacgcttatctttgatccgttctatcacaacttgttttttgttcagttccatatttctatatctcatcctttcacgtgtgtgtttttcttggataacttttgggtctactgctgggtcttcttgttcggaatgtgcagtatgcaatgaccctggttgatcaccccgaaaagtgatgcaatgtagttcatcagcatttgcacgggccattgactcctttttgagcttataggcttcacgacgctttgctagagtttcctgcttttctttgtctgtcatccgcgcataccgctccttatctctgtcttcttcttacattaggatccaagagtggggatggtgatgcagatggcgtggtaccagcatcaagcatgtgtgatggagctggtaagaataaaaagtgtataagaattacaaaatattggtatgagaatctgacattgactgctataaaaggtagggcatagcaaaatttgtctatcacataacatgcatgagttgggagaaatatagatctgagaatctgctattgtttggtaaagacttgtctgtgttatattattttcataagaaaacatatagcaaatcttctcttatcacatactttatacttattactgttttgctttaggttgctgaagtttctgtagagattaggatgaaaaatgctaggaacagaaagttttcaacctgcttccatatttatttttcaaactgaaaacgaaattatgacatcagccactgaattattgcatttttttttcttgattgagtcggtctttagcactgaatcgctaacattgttttgaacactgaaaatatcttattctgttgtagtgcatttatattgtgataggaactcagaaacttcaactaccaagacaggagatcaagatgtctagaatggttagtaatgccgcattcctctaaatattttttgttgggagtttatgaaaactgcttagaatatttgatattgtccttccaaatcattacacaaatgcatcaaaatatgttgtgtctttgttgatggttgctgatgaacttatggccctgagaatacttacaaatgcattttgtatgttcaggcattgtgaatttgtgatcctcaatacaattgaagttgttcacggagctgctcttggcacgatggcttctttggtgatggagcagagctcttagaatgtcttttgatcacaccacaagaacgaattttatttgtggtaccagttttgtttgtatatataggaggataggatgtatgcagcgttcttgtggtgttcggatgtaaaattgggggttcttttggtgttcggagagcgatttgggtgggaatcggagtcggaaaaaaaattgctacggatgcgatctgagaaagagaaaaaaaccgtgcgggg</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0317700, RefSeq:Os02g0317700