Os02g0582300

From RiceWiki
Revision as of 19:17, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0582300

Description

Protein prenyltransferase domain containing protein

Version

NM_001053787.1 GI:115446944 GeneID:4329793

Length

5051 bp

Definition

Oryza sativa Japonica Group Os02g0582300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:23310558..23315608

Sequence Coding Region

23312941..23315478

Expression

GEO Profiles:Os02g0582300

Genome Context

<gbrowseImage1> name=NC_008395:23310558..23315608 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:23310558..23315608 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgggcgacgccaccgccgccgccgcgtcccccggctcgcgcgtacccaggaacgtctcccatgggctcgtctccagccttgccgcgctccaccaacccggcggcgctcctcgcccacctcgccgccgtcctcacctcgcccgactggttcctcaacccttccctgccccgcctccctgccctgctcacgccgtccctgccggagtcgctccccgtcccgctccccgtccgcctcgccgccgcggcggccagggtggccgcgccgtcccgccacctcctcgccgtcgcgctcccggtcgtcctccgcctccactccctctcgcccccgccgctccgcccgctcttcgaccgccccttcgcctccctcctcgcccacctctcccgcttcgccctcgcgccgctcgccctccgcctcttcgcccacatgcaccgccacgccccgccggcgccgacagcccccacctacaacgccgtcatccgctccctctgccgccgcgccgacctcgcccgcgccctgcggtacctcagcctcatggtccgctccggctggcgccccgacgcctacacgttcaactccctcatcgtcgggtattgccgcaccaaccaggtcgacgttgcccgcgacctgttcgacaaaatgcccctgagagggttcgcccaggacgtggtctcttacgccacgctgattgaggggctttgtgaggcggggaggattgacgaggcagtggagttgttcggggagatggaccagccagacatgcacatgtatgcagccttagtgaaggggttgtgtaatgcggagcggggggaggaggggcttctcatgctgcgtaggatgaaggaattggggtggcggccaagcacccgtgcttatgcagctgtggttgatttccggtgtagggagcgtaaggccaaggaggctgaggaaatgcttcaggagatgtttgaaaagggattggcaccgtgtgttgtgacatgcactgcggtgataaatgcatattgtaaggagggaaggatgagcgatgcattgagggtgttggagttgatgaagttgagggggtgcaagccaaatgtgtggacatataatgcattggtccaagggttctgtaatgaaggaaaggtgcacaaggcgatgactttgttgaacaagatgagagcatgtggagtcaacccagatgctgtgacatataatttgttgattcggggccaatgcattgatggacatatagagagtgctttccgattgctacgtttgatggaaggagatggtttaattgctgatcagtacacatataatgcgttgatcaatgctctctgcaaggatggaagaactgatcaagcttgctccctttttgatagtctagaaactagaggcataaaacctaatgccgtgacattcaattccttgataaatgggttatgcaagtctggtaaagctgatattgcatggaaatttttggaaaagatggtttctgcaggttgcacacccgatacttacacatacagttcatttattgaacacctatgcaagatgaaggggtcacaagaaggtctgtcctttataggggagatgctacaaaaggatgtgaagccctcaacagtcaattatacaattgtgattcataagcttttaaaggagagaaactatggattggttgcgagaacctggggcgaaatggtttcatcaggttgcaatcctgatgtagtcacttatacaacgtctatgcgtgcttactgcattgaaggaagactaaatgaagcagaaaatgttttgatggagatgagcaaaaatggggtcactgtagatacaatggcatacaatactctgatggatggacatgcaagtattggacagacagatcatgcagtctcaatcttgaaacaaatgacaagtgttgcttctgtgccaaaccagtttacttattttatcttgcttagacatcttgtacgcatgagattagtggaggatgtgttgcctttgaccccagctggtgtgtggaaagccatagagcttactgatgtctttgggttgtttgatgtaatgaagaagaacgaatttcttcctaattcaggaacttattcttccattctagaggggttttctgaagatggaagaacggaagaggcgacatcgttagtttctcttatgaaagaagatagtatatctctgaatgaagacatctatactgctctcgttacttgtttttgcaaatccaaaaggtatttggatgcatgggtgttggtttgctctatgattcaacatggttttataccacagttgatgtcctaccaacatctgctttctgggcttatttgtgaaggacaaacagataaggctaaagaaatattcatgaattctagatggaaagactatagtcccgatgagattgtgtggaaagtgattattgatggcctgataaaaaaaggtcactcagatatatcccgtgaaatgattatcatgttagagcgtatgaactgcagaccaagtcatcaaacctatgcaatgctgactgaggaattacctgacagggaataa</cdnaseq>

Protein Sequence

<aaseq>MRATPPPPPRPPARAYPGTSPMGSSPALPRSTNPAALLAHLAAV LTSPDWFLNPSLPRLPALLTPSLPESLPVPLPVRLAAAAARVAAPSRHLLAVALPVVL RLHSLSPPPLRPLFDRPFASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVI RSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRG FAQDVVSYATLIEGLCEAGRIDEAVELFGEMDQPDMHMYAALVKGLCNAERGEEGLLM LRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAY CKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNP DAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS LFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEH LCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCN PDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAV SILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVM KKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSK RYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIV WKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDRE</aaseq>

Gene Sequence

<dnaseqindica>131..2668#ggtggtgttccttgcgcaaatctcgaagcaggggcagcgtcaagccgtcaacccggctcctggcaaaggagcagagccgagatcccccagcaatggcggcggcgcagtgagctcgccgccgattgccaacatgcgggcgacgccaccgccgccgccgcgtcccccggctcgcgcgtacccaggaacgtctcccatgggctcgtctccagccttgccgcgctccaccaacccggcggcgctcctcgcccacctcgccgccgtcctcacctcgcccgactggttcctcaacccttccctgccccgcctccctgccctgctcacgccgtccctgccggagtcgctccccgtcccgctccccgtccgcctcgccgccgcggcggccagggtggccgcgccgtcccgccacctcctcgccgtcgcgctcccggtcgtcctccgcctccactccctctcgcccccgccgctccgcccgctcttcgaccgccccttcgcctccctcctcgcccacctctcccgcttcgccctcgcgccgctcgccctccgcctcttcgcccacatgcaccgccacgccccgccggcgccgacagcccccacctacaacgccgtcatccgctccctctgccgccgcgccgacctcgcccgcgccctgcggtacctcagcctcatggtccgctccggctggcgccccgacgcctacacgttcaactccctcatcgtcgggtattgccgcaccaaccaggtcgacgttgcccgcgacctgttcgacaaaatgcccctgagagggttcgcccaggacgtggtctcttacgccacgctgattgaggggctttgtgaggcggggaggattgacgaggcagtggagttgttcggggagatggaccagccagacatgcacatgtatgcagccttagtgaaggggttgtgtaatgcggagcggggggaggaggggcttctcatgctgcgtaggatgaaggaattggggtggcggccaagcacccgtgcttatgcagctgtggttgatttccggtgtagggagcgtaaggccaaggaggctgaggaaatgcttcaggagatgtttgaaaagggattggcaccgtgtgttgtgacatgcactgcggtgataaatgcatattgtaaggagggaaggatgagcgatgcattgagggtgttggagttgatgaagttgagggggtgcaagccaaatgtgtggacatataatgcattggtccaagggttctgtaatgaaggaaaggtgcacaaggcgatgactttgttgaacaagatgagagcatgtggagtcaacccagatgctgtgacatataatttgttgattcggggccaatgcattgatggacatatagagagtgctttccgattgctacgtttgatggaaggagatggtttaattgctgatcagtacacatataatgcgttgatcaatgctctctgcaaggatggaagaactgatcaagcttgctccctttttgatagtctagaaactagaggcataaaacctaatgccgtgacattcaattccttgataaatgggttatgcaagtctggtaaagctgatattgcatggaaatttttggaaaagatggtttctgcaggttgcacacccgatacttacacatacagttcatttattgaacacctatgcaagatgaaggggtcacaagaaggtctgtcctttataggggagatgctacaaaaggatgtgaagccctcaacagtcaattatacaattgtgattcataagcttttaaaggagagaaactatggattggttgcgagaacctggggcgaaatggtttcatcaggttgcaatcctgatgtagtcacttatacaacgtctatgcgtgcttactgcattgaaggaagactaaatgaagcagaaaatgttttgatggagatgagcaaaaatggggtcactgtagatacaatggcatacaatactctgatggatggacatgcaagtattggacagacagatcatgcagtctcaatcttgaaacaaatgacaagtgttgcttctgtgccaaaccagtttacttattttatcttgcttagacatcttgtacgcatgagattagtggaggatgtgttgcctttgaccccagctggtgtgtggaaagccatagagcttactgatgtctttgggttgtttgatgtaatgaagaagaacgaatttcttcctaattcaggaacttattcttccattctagaggggttttctgaagatggaagaacggaagaggcgacatcgttagtttctcttatgaaagaagatagtatatctctgaatgaagacatctatactgctctcgttacttgtttttgcaaatccaaaaggtatttggatgcatgggtgttggtttgctctatgattcaacatggttttataccacagttgatgtcctaccaacatctgctttctgggcttatttgtgaaggacaaacagataaggctaaagaaatattcatgaattctagatggaaagactatagtcccgatgagattgtgtggaaagtgattattgatggcctgataaaaaaaggtcactcagatatatcccgtgaaatgattatcatgttagagcgtatgaactgcagaccaagtcatcaaacctatgcaatgctgactgaggaattacctgacagggaataatatgccacacaagtctcattcatcactcgaagcgaaatccccatcagctgtgcaaactggcatctcattaggtgctgttcaagcacaaggtgcaccaagtgatgtgaaatggatcatccaacatactctctcacacacaaaatgagttcacgctctatttgctctctggaaggtacaaaactggttcttggtattatgactttgctatttatttgttactctcagtacatgactatatgtgttgcttcccataaagcttttgaccgaagtgtacaaatataaaattccgcattccacctgatcaatactaaccttaactttacttactgaattgatactaaattctctagccttcagtgtgttcactgaataatgtatggcaccacatgagaatccgtagctcctgaactaagaaaataaaagaactctagataatggtggaagcacatataacgacttgatgctatatgttgacaattctttgtttttttttttggaacattgtgtctggatatccacaaataaggtccatagagtataactttgacatttacccatgtgaactatttttcttggcaaaggaagatttttgagctatacaaaacaacttgctgtacttggcaaggttagttaattgcttgggttatcaagggaaacaaacattgacatatatctgaggtgttcagagaaagcattcataaatgtatcactaaattgataggccgtcaggaaaaatgatgaattccgtgatttcttgaaaaaaatggctttgttttgttatatgttccttgagttctctagaccattccttggatttccttttccatgcgtagtgtacagattttctgagcagaaacatcccttttgataaagctgtagcgctgtactcgaaagataacttgagtttgaagcttaatagaaaaaggatatcaccaaaagatcataaagctaataataccgtgttccttttctttgtagagcagtgattatcagatttttgaagactgatatgagcgcaaagcatttgaatccagattgtgtgtgtgcctgtactatatcaggtcgacagatagtgtttacagatttgtaggagccaaaagtcccataccgctatggcaggcttcgctactttattattttattgatctgaagagaggttgccaagtttgattcgacgattttgtcacggatcttctgagttactgtgtggcacaatttctgatgctggttgttgaaccgatgagtgatctgatttttttgggtggcaagtattgttgccagtaaaatatatggaagggccgaaagatttggaaatgcactcagcgatcagtttcaataaatcatcaacataggaattactggtaagcctctttcaacttttgcataatgaatcttcagttctaattccatgtgcaatataggtagatttatctgtaattgactgacaaaatgttccaagagaaggaactaatctggtcggctactaacttgtttgcactgccagtaatattgaaataagcagcaatcttgaaggtgtgtacgcgcaactcgaataatatttgcattacgttggcgctgtaaaaggaaatcatgagttgatgctacgatatcagtactgttatatcgcttgatttgatgtctggaagcaacgggatactccctccgttccaaaaaaaaaagacaaaccctggatttacgtgtccaactttgactgtctgtcttatatgaaatttttttataattcgtatttttattgttgttggatgataaaacatgattaatactttgtgcatgacttgtctttttaattttttttataattttttcaaataagacggatggtcaaacattgggcacggaaaccagggtttgtcttttttttttttgggacggagggagtagctgactagagcatagtgacaatctacagaagtctcatttcttatgttcaagaccgacacataggatgcatatggcactacttgtatagttactatatggtatcggtatgtgttattctgtcatatatgctcacttgtgcattccatcttagtacatttatgtactgatgaataatccatctggatggtgccaggtcacaatctgggaaagaaaggaatctattaacggacggccaagattccctggcccactcaaaacagcgaaatgcacaaagcctcgatcggcgtctgacaggctgtcacggacgtgggctcacaatcgggctttcaggctgaatgtatggcccagccagataggaaagacagcgttataaaccaaagccacgctgcagccatagctgagcacatggaggtgccacattttgtcacactaaatgttactccatccgtctcataatataatattttaagtttttgtttgc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0582300, RefSeq:Os02g0582300