Os02g0670100

From RiceWiki
Revision as of 19:20, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0670100

Description

Similar to Protein kinase APK1A, chloroplast precursor (EC 2.7.1.-)

Version

NM_001054229.1 GI:115447828 GeneID:4330270

Length

2479 bp

Definition

Oryza sativa Japonica Group Os02g0670100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:28102102..28104580

Sequence Coding Region

28102102..28102692,28102790..28102941,28103374..28103521,28103915..28104324,28104505..28104580

Expression

GEO Profiles:Os02g0670100

Genome Context

<gbrowseImage1> name=NC_008395:28102102..28104580 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:28102102..28104580 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggaattgcttcggctccgatgacggcgaggtggaggccgtcaaggtgatggcccgtcatgcgctgccacaagcggcaatggcgagaccggtcatggtcgcgatcgcgcagcccaatgcacgcgtcgcgatgagcccagggcggccaccaactggtaagttgccgagccaggccacagccacaagcaccggcggcgggcgatcggtggctggtggtggaggccggacgaacgccggcggcgacgccagcgcggaggggaggatcctggaggcgcccaacctccggatcttcacgttcgccgagctcagggccgccacgaggaacttcaaggcggacaccgtcctcggcgagggcgggttcgggcgggtgcacaaggggtgggtggacgagaggaccatgagccccgcgcggagcggctccggcatggccgtcgccgtcaagaagctcgatccggagagcttacagggcgtgcaagaatggcagtccgaggtgaattttctggggagactttcacatcccaacctggtgaggctactgggctactgctgggaggacaaggagctactgcttgtgtacgagtacatggcccaaggcagcttggagaaccacctcttcagaagtgagccacgcaagggcggaagcgcgtcgcctcagcagccgctgtcgtggagcctccggctgcgcatcgccatcggcgcggcccgcgggctggcgttcctccactcgtcggagaagcacgtcatctaccgagacttcaaggcctccaacatcctcctcgacacgcaattccacgcgaagctctccgacttcgggctcgccaaggacgggccggccggcggcagcagccacgtgacgacccgcgtgatgggcacctacggctacgcggcgccggagtacgtggcgacgggccacctgtacgtgaagagcgacgtgtacggcttcggcgtcgtgctgctggagctcctgacggggctccgcgcgctcgacgccgggcggcccagcgggcagcaccacctggtggactgggccaagccattcctgtccgaccgccggaagctggctcggctcatggacccgcgcctcgaggggcagtactcgtccaggggcgcgcagcgtgcggcgcagctcacgctccggtgcctcgccgccgaccacaagaaccggccctccatgagggaggtcgtcgccgtcctcgaggagatcgagtccatgtccaggggcggcagcggcggtggcgcccccggctcggcgtccccgcgtcccgcggcacggggcggcggcggcggcggcgcgcacggttacggccagtcgccgcggccggggtcggactgggctggcccggccgctggccacccgtctccgagagtgagatag</cdnaseq>

Protein Sequence

<aaseq>MGNCFGSDDGEVEAVKVMARHALPQAAMARPVMVAIAQPNARVA MSPGRPPTGKLPSQATATSTGGGRSVAGGGGRTNAGGDASAEGRILEAPNLRIFTFAE LRAATRNFKADTVLGEGGFGRVHKGWVDERTMSPARSGSGMAVAVKKLDPESLQGVQE WQSEVNFLGRLSHPNLVRLLGYCWEDKELLLVYEYMAQGSLENHLFRSEPRKGGSASP QQPLSWSLRLRIAIGAARGLAFLHSSEKHVIYRDFKASNILLDTQFHAKLSDFGLAKD GPAGGSSHVTTRVMGTYGYAAPEYVATGHLYVKSDVYGFGVVLLELLTGLRALDAGRP SGQHHLVDWAKPFLSDRRKLARLMDPRLEGQYSSRGAQRAAQLTLRCLAADHKNRPSM REVVAVLEEIESMSRGGSGGGAPGSASPRPAARGGGGGGAHGYGQSPRPGSDWAGPAA GHPSPRVR</aaseq>

Gene Sequence

<dnaseqindica>1889..2479#1640..1791#1060..1207#257..666#1..76#atggggaattgcttcggctccgatgacggcgaggtggaggccgtcaaggtgatggcccgtcatgcgctgccacaaggtacatatatgaatatcgacatcccgatgctctgcttacaatatcactacgttttctttgtattcgtgagatttattttgttcatcgggatctggaaccaacaaagccattttgtcatggttttggtgctgcgtctctagttctgacgcacttcgtgtgctgggttttgctcttttgcagcggcaatggcgagaccggtcatggtcgcgatcgcgcagcccaatgcacgcgtcgcgatgagcccagggcggccaccaactggtaagttgccgagccaggccacagccacaagcaccggcggcgggcgatcggtggctggtggtggaggccggacgaacgccggcggcgacgccagcgcggaggggaggatcctggaggcgcccaacctccggatcttcacgttcgccgagctcagggccgccacgaggaacttcaaggcggacaccgtcctcggcgagggcgggttcgggcgggtgcacaaggggtgggtggacgagaggaccatgagccccgcgcggagcggctccggcatggccgtcgccgtcaagaagctcgatccggagagcttacagggcgtgcaagaatggcaggtgcgtgatatttcttttcgtcaaataaaccatgatcaaaagaacaataactttgtagaatccgcgactaaatgatttagccctcttgatctcatcacattctcatgcgaagcataaattacgattggtccttagttccccgacgcatggacgcgttcccgtcataatctgagatgcatgagtcaaatctttcttcgctgacaaaatgggatgccaccttgtgattgatgaagaaatggtgttgatcttgttggtattaaaatgttcatgcaatggttcgtcagtaggcagtgtgcatgtttagtggtcggcacgtcgggtgctgatgcgactgttgtttttctcttcttctttttggcttttccactgtgtcgttaacgaatttgtttgcagtccgaggtgaattttctggggagactttcacatcccaacctggtgaggctactgggctactgctgggaggacaaggagctactgcttgtgtacgagtacatggcccaaggcagcttggagaaccacctcttcagaagtgagccacgcagtaagtaaactttaagacaaaaggtttcatggtgctttcagatccatgacggtatggccatgattattaagagctgacaacttgacttgggctgctaattaacgatgcctgatggtggtcacaaggggacaaattgagatcattgttctgcttcacatggagaggggattagtggatgttctgagaacagagtcaactgatagtgcataatttatacaggtgaatagagtatcaaaagctagcttgatatgaagagtatagatatatagatataattgggttgccaggttggaattggaatgacaatggaatttacttcattattggattgcaaagctggcatcggaaaatcaaaccagaatttttctgaacacactgtaactgaacggtagaacgagagctgaaaaatgacaatctttttgtgtcaaccagagggcggaagcgcgtcgcctcagcagccgctgtcgtggagcctccggctgcgcatcgccatcggcgcggcccgcgggctggcgttcctccactcgtcggagaagcacgtcatctaccgagacttcaaggcctccaacatcctcctcgacacggtaacgccctgcacgctgccgcctcccgccagagtacacgccgtcgtctaactcgatcatctccttttcctcgcggattgatcatgcgtacgtgcagcaattccacgcgaagctctccgacttcgggctcgccaaggacgggccggccggcggcagcagccacgtgacgacccgcgtgatgggcacctacggctacgcggcgccggagtacgtggcgacgggccacctgtacgtgaagagcgacgtgtacggcttcggcgtcgtgctgctggagctcctgacggggctccgcgcgctcgacgccgggcggcccagcgggcagcaccacctggtggactgggccaagccattcctgtccgaccgccggaagctggctcggctcatggacccgcgcctcgaggggcagtactcgtccaggggcgcgcagcgtgcggcgcagctcacgctccggtgcctcgccgccgaccacaagaaccggccctccatgagggaggtcgtcgccgtcctcgaggagatcgagtccatgtccaggggcggcagcggcggtggcgcccccggctcggcgtccccgcgtcccgcggcacggggcggcggcggcggcggcgcgcacggttacggccagtcgccgcggccggggtcggactgggctggcccggccgctggccacccgtctccgagagtgagatag</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0670100, RefSeq:Os02g0670100