Os02g0754100

From RiceWiki
Revision as of 19:23, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0754100

Description

Similar to S1 self-incompatibility locus-linked pollen G211 protein

Version

NM_001054687.1 GI:115448744 GeneID:4330762

Length

5014 bp

Definition

Oryza sativa Japonica Group Os02g0754100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:32598242..32603255

Sequence Coding Region

32598668..32599069,32599153..32599224,32599308..32601518,32602312..32602375,32602464..32602519
,32602615..32603013

Expression

GEO Profiles:Os02g0754100

Genome Context

<gbrowseImage1> name=NC_008395:32598242..32603255 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:32598242..32603255 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagggccaccggggagcacaccgcggccgtccccatccccgcgccgccgcagctgccggctccgggggccgtgacggaggacgccgctgagaaggagaggaggcggcggcgacgcgcgccgcggaggaccaagcaggccgcggcgcagcaggaggagccggcggcggcggcggggccgaggtcgtgcagatcgatgccgcccatgcacgtgagcgccccgttggatgccgaggcggtggaggaggaggaggccgcggggacgagccggtcatgccccttgctgcccacgccgagccccgtggaggcgctgcccgtggcgggaatgggacgaggagctgctgggaggcggttcttccagtcccactggcccgaacaggccgtggaggaggcgatcaagggagggaatgccttcgtggggaagttccgtgtgaatgcacacaaccgaaatgaggcgtactgtacgattgagggtataccagtggatgttctcattactggggtggcgcaaaaccgagcgattgaaggtgatcttgttgctatgacacttgaacctgttgcttactggactagaatgaaaggaccaaacattacgtgcaaccctgctataggagagggttctgctgttcgtgaagttggtgaaacaaatgggaatcatgatgggaagaaaggtcagacagatgccaactgcaggtttggaaattgcagcaatggccaacctgtttcggacaggacgcattaccgtcacaagaacagtggttttagtaaagctgttacgtgtgaaaatggtcatgctactgtcccagaaaattgtggaaaggacttaggtgaaggaaaatctgaggcttctagagcattgcataggatctgttctatggtatactctaacccaagcagacgtcccactggaaaggtattagctattattaagaagtctcctcgccgtgacactgttgtaggttttcttgctcctttcgcagtgtgtcctgatccagagcagcagaaaaatcagatgagtatgctttcaaagaggatgaaccatagagcatcatcctatttttcaggactgattcttctcttgccaactgattccaaattccctcatatggttgttaatgttagtactttgccagatagtgtcagaaaccatttggaagaaggtgatgcagctaaagaattagtcgctgcacgaatttctgattggaatgaggaaagtctctatccctgtgctcatgtcatacagttgttggggaagggtggacaagtcaaaacacacatggatgctatactttttgaaaatgcaatatctgatgctgaattctctcctgagtccatggaatgccttcctgatatttgctggaaaattcctcaggaagaacttgaagtaagaaaagatttgagaaatgtcttgacctttacaatagacccccctactgcaactgatcttgatgatgccatatctattgagatgctttcagggggaattgtgcgtattggggtgcatattgcagatgtttcttactttgttcatcctgagactgcactggatgctgaagctcagatccgatctactagtgtttacaccttacgacgcaaaatatcaatgttgcctttgagactttcagaagatctggtctcccttaatcctggggtagacaggcttaccttttcgatcatttgggacatagatcctcatgggaacataattaatcgttggattggacgtactgttatttcttcatgctgcaagctgtcatatgatcttgtgcaggatttgatttgtagcgatggaactaagtttaaatctgcttcttctcttcaagtacatggcatatttgaacaagatgatgttatcaagtcccttaggtgcttatatgagatctcaaagaatctgaaggagattagatttaagggtggagctttgtcccttgaaactgcaaagcttatgatccaatttgatgaaggtggagctccatgcgatagctttcgctatgagaggaatgatgcttgttttattgttgaggagttaatgttgctagcaaatatgtcagctgcagaagttatatccaatgcattcccaaattgtgcgttacttcgtaggcaccctgaaccgaatttacggaagtccagagagtttgaggcattttgtgctaggaatggttttgaattggatggttcatcatctggtcaacttcacctttcactttctagaatgaaggaaaagttaaaggatgatcctgttttgtttgatattctcatgttttatgcttcaaagcaaatgcagtcagcagaatacttttgcacagcagacctgataagcaagagggatgattgggctcactatgcgttatctgtccctctatatacacatttcacatcaccacttcgaagatatcctgatataattgttcacagaacactgaatgcagtaattgaggctgaaaagatgtatctgaaacacaggagatctctcacaggccaaaacggattcaacaccgcatcttgtgagatgatgcacggatgctttacaggtctccaatttagtaaggatgctgctgaatccaaagaagggagtgaagcattatctgctgctgctaagaagtttaaagtcccttcccctgataatcttggagaggttgctgaacactgcaacgaaagaaagtgggccagtcgtcgtgcagaagatgctggtcagaagctctacatgtgggccttgataaagaggaaagaggtcctggttgccaatgctagagttctggggcttggaccaaagttcatgtcagtttatgtgcccaaactagcgatggaacggaggatacattatgacgaagttgagggcctatctattgagtggttggaagccactggaacattggtgcttgattcatgcaggaacaggcctcctcaaaggaggggaaatcaggtgaagtatagagcatttgaggaagtcgccatgatggttaacccatctgaatcaatattctccgaagaagatgaggaatctggagcaacagaagctggttgtgacactgccaagtcagttttgctgagtgatgaagcagtgaaagcgcaagttgccccggccgtcctgcctctggtgatacaatacttgagcgaaattcctgtggttcttcatgcgattggtggtgaggactctgcgttggacattggagtaagactatacatgtcatcatatttcaagtga</cdnaseq>

Protein Sequence

<aaseq>MRATGEHTAAVPIPAPPQLPAPGAVTEDAAEKERRRRRRAPRRT KQAAAQQEEPAAAAGPRSCRSMPPMHVSAPLDAEAVEEEEAAGTSRSCPLLPTPSPVE ALPVAGMGRGAAGRRFFQSHWPEQAVEEAIKGGNAFVGKFRVNAHNRNEAYCTIEGIP VDVLITGVAQNRAIEGDLVAMTLEPVAYWTRMKGPNITCNPAIGEGSAVREVGETNGN HDGKKGQTDANCRFGNCSNGQPVSDRTHYRHKNSGFSKAVTCENGHATVPENCGKDLG EGKSEASRALHRICSMVYSNPSRRPTGKVLAIIKKSPRRDTVVGFLAPFAVCPDPEQQ KNQMSMLSKRMNHRASSYFSGLILLLPTDSKFPHMVVNVSTLPDSVRNHLEEGDAAKE LVAARISDWNEESLYPCAHVIQLLGKGGQVKTHMDAILFENAISDAEFSPESMECLPD ICWKIPQEELEVRKDLRNVLTFTIDPPTATDLDDAISIEMLSGGIVRIGVHIADVSYF VHPETALDAEAQIRSTSVYTLRRKISMLPLRLSEDLVSLNPGVDRLTFSIIWDIDPHG NIINRWIGRTVISSCCKLSYDLVQDLICSDGTKFKSASSLQVHGIFEQDDVIKSLRCL YEISKNLKEIRFKGGALSLETAKLMIQFDEGGAPCDSFRYERNDACFIVEELMLLANM SAAEVISNAFPNCALLRRHPEPNLRKSREFEAFCARNGFELDGSSSGQLHLSLSRMKE KLKDDPVLFDILMFYASKQMQSAEYFCTADLISKRDDWAHYALSVPLYTHFTSPLRRY PDIIVHRTLNAVIEAEKMYLKHRRSLTGQNGFNTASCEMMHGCFTGLQFSKDAAESKE GSEALSAAAKKFKVPSPDNLGEVAEHCNERKWASRRAEDAGQKLYMWALIKRKEVLVA NARVLGLGPKFMSVYVPKLAMERRIHYDEVEGLSIEWLEATGTLVLDSCRNRPPQRRG NQVKYRAFEEVAMMVNPSESIFSEEDEESGATEAGCDTAKSVLLSDEAVKAQVAPAVL PLVIQYLSEIPVVLHAIGGEDSALDIGVRLYMSSYFK</aaseq>

Gene Sequence

<dnaseqindica>4187..4588#4032..4103#1738..3948#881..944#737..792#243..641#ctcccctcccatttcttccttccttgccccctcctcctcctcctcctctgcctctatctatcccctcctcgcctacgcctcgcatcgccctccggtgcctcaagttttttttttccgcgtcggtatcggcggcgaagcgggcgcctcctccacctccagatctagggttcccgccgcccagggctctctccccttccttctcgaggcttagccaaacccagcagcacgagtgaggctgcgccatgagggccaccggggagcacaccgcggccgtccccatccccgcgccgccgcagctgccggctccgggggccgtgacggaggacgccgctgagaaggagaggaggcggcggcgacgcgcgccgcggaggaccaagcaggccgcggcgcagcaggaggagccggcggcggcggcggggccgaggtcgtgcagatcgatgccgcccatgcacgtgagcgccccgttggatgccgaggcggtggaggaggaggaggccgcggggacgagccggtcatgccccttgctgcccacgccgagccccgtggaggcgctgcccgtggcgggaatgggacgaggagctgctgggaggcggttcttccagtcccactggcccgaacaggccgtggaggaggcgatcaaggttagccgctgatgccgccttggtggcttgcaactttgcggtagaaatttcgtgcgagctggtccattgactttgctgttgcgtccgtcgtgcagggagggaatgccttcgtggggaagttccgtgtgaatgcacacaaccgaaatgaggcaagtattgcttgcttcgtagttttgattgcttgttgtactgtttccatgcaattgtgtggtaatgttgtttatgtgatttttgtaggcgtactgtacgattgagggtataccagtggatgttctcattactggggtggcgcaaaaccgagcggtaagttctggttgacatgcatttgtgctacctgaatgtatgtgttataatgttgtctaactgtgtagtaattagtagtgactcttttagagaacactagtggatattggaaatgcagggtgctactcttagtctatcatgtatgtagcgttgaatttcatgttaaggtcacacacacgtctcgctaactggttacatatatgaggaattggaatacactaactccacgtttatagatacctcatgagtaatcaggaaatgcaatgtttgtcatatttggtatcatatgagcctcagggaaagtcatgtgcaacactattgcacctttccttcccatgatctaacaacgccacttttttttaagtttctgtcatgtcactggattgggcacctctatttttgtcgttagtttgagaccgtgtgcaaaaaatctctgacttgtcttctcgtggccatcctttcttctggtacactttaacttttggaacccctaacttttattatgttgtatgcattcatcttacctgtgataatcctacaacagcattcaacatgataccttatttatagaagcaattcattcaggagaaatgtttaggtgatagattcctagtaaaacttttttgtcttgtcttgccatgttaccatatagtttattagaaatgaccatatagttcgttagaaatggattcgttgttctgctcattttcattgcatataccattcctgtatccatagtgaatgttttttaaattattttttttgatacaatgttgtacgaaccactttgcagattgaaggtgatcttgttgctatgacacttgaacctgttgcttactggactagaatgaaaggaccaaacattacgtgcaaccctgctataggagagggttctgctgttcgtgaagttggtgaaacaaatgggaatcatgatgggaagaaaggtcagacagatgccaactgcaggtttggaaattgcagcaatggccaacctgtttcggacaggacgcattaccgtcacaagaacagtggttttagtaaagctgttacgtgtgaaaatggtcatgctactgtcccagaaaattgtggaaaggacttaggtgaaggaaaatctgaggcttctagagcattgcataggatctgttctatggtatactctaacccaagcagacgtcccactggaaaggtattagctattattaagaagtctcctcgccgtgacactgttgtaggttttcttgctcctttcgcagtgtgtcctgatccagagcagcagaaaaatcagatgagtatgctttcaaagaggatgaaccatagagcatcatcctatttttcaggactgattcttctcttgccaactgattccaaattccctcatatggttgttaatgttagtactttgccagatagtgtcagaaaccatttggaagaaggtgatgcagctaaagaattagtcgctgcacgaatttctgattggaatgaggaaagtctctatccctgtgctcatgtcatacagttgttggggaagggtggacaagtcaaaacacacatggatgctatactttttgaaaatgcaatatctgatgctgaattctctcctgagtccatggaatgccttcctgatatttgctggaaaattcctcaggaagaacttgaagtaagaaaagatttgagaaatgtcttgacctttacaatagacccccctactgcaactgatcttgatgatgccatatctattgagatgctttcagggggaattgtgcgtattggggtgcatattgcagatgtttcttactttgttcatcctgagactgcactggatgctgaagctcagatccgatctactagtgtttacaccttacgacgcaaaatatcaatgttgcctttgagactttcagaagatctggtctcccttaatcctggggtagacaggcttaccttttcgatcatttgggacatagatcctcatgggaacataattaatcgttggattggacgtactgttatttcttcatgctgcaagctgtcatatgatcttgtgcaggatttgatttgtagcgatggaactaagtttaaatctgcttcttctcttcaagtacatggcatatttgaacaagatgatgttatcaagtcccttaggtgcttatatgagatctcaaagaatctgaaggagattagatttaagggtggagctttgtcccttgaaactgcaaagcttatgatccaatttgatgaaggtggagctccatgcgatagctttcgctatgagaggaatgatgcttgttttattgttgaggagttaatgttgctagcaaatatgtcagctgcagaagttatatccaatgcattcccaaattgtgcgttacttcgtaggcaccctgaaccgaatttacggaagtccagagagtttgaggcattttgtgctaggaatggttttgaattggatggttcatcatctggtcaacttcacctttcactttctagaatgaaggaaaagttaaaggatgatcctgttttgtttgatattctcatgttttatgcttcaaagcaaatgcagtcagcagaatacttttgcacagcagacctgataagcaagagggatgattgggctcactatgcgttatctgtccctctatatacacatttcacatcaccacttcgaagatatcctgatataattgttcacagaacactgaatgcagtaattgaggctgaaaagatgtatctgaaacacaggagatctctcacaggccaaaacggattcaacaccgcatcttgtgagatgatgcacggatgctttacaggtctccaatttagtaaggatgctgctgaatccaaagaagggagtgaagcattatctgctgctgctaagaagtttaaagtcccttcccctgataatcttggagaggttgctgaacactgcaacgaaagaaagtgggccagtcgtcgtgcagaagatgctggtcagaagctctacatgtgggccttgataaagaggaaagaggtaccgtggtatcatttttttggcttctgcaactgattttatctaagctttattttgaaaggcttatggttttacttttgcaggtcctggttgccaatgctagagttctggggcttggaccaaagttcatgtcagtttatgtgcccaaactagcggtatatatatgcctaacctcatggaagcacttgtttttgttgttttcttcttagccttgatgtgatcaatcttttttgtgtagatggaacggaggatacattatgacgaagttgagggcctatctattgagtggttggaagccactggaacattggtgcttgattcatgcaggaacaggcctcctcaaaggaggggaaatcaggtgaagtatagagcatttgaggaagtcgccatgatggttaacccatctgaatcaatattctccgaagaagatgaggaatctggagcaacagaagctggttgtgacactgccaagtcagttttgctgagtgatgaagcagtgaaagcgcaagttgccccggccgtcctgcctctggtgatacaatacttgagcgaaattcctgtggttcttcatgcgattggtggtgaggactctgcgttggacattggagtaagactatacatgtcatcatatttcaagtgataggaaataagcattaagacagaaatctattttctttggtgaacaacagtaataaaaaaatgacagaagagtagcatttaaaagttcctttcagggttcagcaagcaaatatcaactagtgttgcagatgctccattcctgtgtagcttctttctccgttatcatatttacctccatttgacatccaaggttctcgcggtcaagtagccttccttttttacttcaggccacttgaccaagtcccagattcagctttgacagaagactctgtatcggtgatgtattcattagttgctccttagatgcttttgttcttgtgttgagccacctgcagttttttatactggtgaactcttacacatgtttgtcatcttgctttgttactttggaaaagaataaaaatactgaagctttattgaatatttc</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0754100, RefSeq:Os02g0754100