Os02g0780700

From RiceWiki
Revision as of 19:24, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0780700

Description

Lipase, class 3 family protein

Version

NM_001054841.1 GI:115449052 GeneID:4330922

Length

5246 bp

Definition

Oryza sativa Japonica Group Os02g0780700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:33965172..33970417

Sequence Coding Region

33965878..33966189,33967214..33967411,33967542..33967814,33967943..33968045,33968665..33968783
,33969071..33969247,33969336..33970127

Expression

GEO Profiles:Os02g0780700

Genome Context

<gbrowseImage1> name=NC_008395:33965172..33970417 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:33965172..33970417 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgacagcaacaatggcaaccgcagctggcgcggctgcgcttctgtactacacgctgaaccgccggcttcaggtggagaagctgaatcaggaaggcgattgcggcaatgaaagagatgccgcgacgaggggggccctcagtaccaccagcaggagcagggtgtcaaggagggatgttcgtgcccctgccacatggctggagacaatttccactctgtcggagacactgcggttcacatactcagagacccttgggaagtggcccatcggtgacctcgcttttgggattagcttcctcctcaagaggcaggggaatgtacctgtagcaagcatatatgctggagatgatagtgtggagctcaatggagctccagtaattgctgacttaaagcatcatttaaatttgttgacactatgttggcatttctccaagaagccgttcccgttgtttttggaggcgactggctactcttcggaggatgttcttatgcaagagcctaaagcaggaattttgaagccagctttcaccattatacttgatagagacaagcaatgtatacttctattaattaggggaacccacagcatcagggacacactaacagcagccactggtgctgtggttccattccaccatactattgtacaggaaggtggtgttagcgatttagttttagggtacgcgcactttgggatggttgcagcagctagatggattgcaaagcttgcagccccttgtcttgctcaggcattgcatactcatccagattataaaataaagattgttggacattcacttggtggtggtacagcagctctgttgacatatgtcctgagggaacagcaggagtttgcatctactacttgtgtctcctttgctccagctgcttgtatgacatgggatctggcagaatcaggagtgcattttatcactacagtcatcaatggagctgatctggtgccaaccttttcagctgcatcagtagacgatcttcgttcagaggttactgcatctgcctggttaaacgatctgcgccaccaaatagagcaaaccagaattctgagcactttctatcgatctgcgtcagccttgggatcaagacttccttcaatagcaaatgccaaagcaagagtagctggtgctggtgctatcctaagacctgtatctaccgggacacaggttgtaatgaggagagctcgtagtgtagcacaagcagcttggacaagaccagcacttcagctatcctcatggacatgtattggcccaaggaggcgaactaatactgtatccacttcaacagtaacatcagaagaaataagagcaacaacaaatgatggctctgagtccacttctctgttgactgaaaccacagagatagttaaaactgaaaccatgcagtttgcttcatcagaagaggttcagagttcgagtgaggtgtcagatgctgttggaatgatggatgagaaggtagatagtgacggtgaggacatcattgatcaccatgtggatgaggacaggatgactgacgtagagctgtggcagcaacttgaaaatgagttgtaccgaaggagtgaagatgacgaaatagtggaggatatgactgaaagtgctattactgaagaggtgggtggcacagctgaagatgtgctcagtgagaccaatgacaaggaggtacatagattttatcctccaggaaaaatcatgcatatattaacttccaccatagaggaaacagtcagtgccgaagagtcgagcgtgcctcatgaagatgacacgaccggtgattcggacaccagaataggcatcttcttgaccccaaggtcattatatggcaaactgaggctttcaaaaatgatgattaacgatcattacatgcctatatatagaagaaatattgagcagttgatcgctgagcttgagaaggattcgtcattcccagtcagtgattgtcttgacagtgaagttccctag</cdnaseq>

Protein Sequence

<aaseq>MATATMATAAGAAALLYYTLNRRLQVEKLNQEGDCGNERDAATR GALSTTSRSRVSRRDVRAPATWLETISTLSETLRFTYSETLGKWPIGDLAFGISFLLK RQGNVPVASIYAGDDSVELNGAPVIADLKHHLNLLTLCWHFSKKPFPLFLEATGYSSE DVLMQEPKAGILKPAFTIILDRDKQCILLLIRGTHSIRDTLTAATGAVVPFHHTIVQE GGVSDLVLGYAHFGMVAAARWIAKLAAPCLAQALHTHPDYKIKIVGHSLGGGTAALLT YVLREQQEFASTTCVSFAPAACMTWDLAESGVHFITTVINGADLVPTFSAASVDDLRS EVTASAWLNDLRHQIEQTRILSTFYRSASALGSRLPSIANAKARVAGAGAILRPVSTG TQVVMRRARSVAQAAWTRPALQLSSWTCIGPRRRTNTVSTSTVTSEEIRATTNDGSES TSLLTETTEIVKTETMQFASSEEVQSSSEVSDAVGMMDEKVDSDGEDIIDHHVDEDRM TDVELWQQLENELYRRSEDDEIVEDMTESAITEEVGGTAEDVLSETNDKEVHRFYPPG KIMHILTSTIEETVSAEESSVPHEDDTTGDSDTRIGIFLTPRSLYGKLRLSKMMINDH YMPIYRRNIEQLIAELEKDSSFPVSDCLDSEVP</aaseq>

Gene Sequence

<dnaseqindica>707..1018#2043..2240#2371..2643#2772..2874#3494..3612#3900..4076#4165..4956#attcgccgcagggctcggctccacacgaacgcgacgcggcggccgccaccgattccatccggaggaaggagccgcgccgcctccttcctatatccctcctcctctcccgtcctaaaccctagccgcgaccgcgagttcggggtcctaatccggatcgactccgcctccccgagtcgctcggacgcgttcttcttccgggtaatcttaatctcctactattccgcgtttgagcctttacgctctctttctttttcttgtgtgtgcgtgatttggcggtgattctcgaggtaattcgttgcttccgcacgttggttttctcggtcgatttattatcttgtggttttttttggggggttgatttggtgtaggggttcaatgatccattattactacttgtgctgtatgtagggctgggaaaattagggtttgttttcccgtttgtaacggctaattattatctcggtgaaaaatcgacggcctcgctgtaatattaaggctcgaaatctatctgtgtggtaccaggtttgactttgtgctgcccaagattgcatctccagcggaagaatcagagggattaaattaacgctgtctggctgcgccattaataaccttgggtggtggtggtggtggtggtggtggtggtgctccactggagtggaggctgtgagcaagctagtggagtgggggcgtttcttaggcaggtgctatggcgacagcaacaatggcaaccgcagctggcgcggctgcgcttctgtactacacgctgaaccgccggcttcaggtggagaagctgaatcaggaaggcgattgcggcaatgaaagagatgccgcgacgaggggggccctcagtaccaccagcaggagcagggtgtcaaggagggatgttcgtgcccctgccacatggctggagacaatttccactctgtcggagacactgcggttcacatactcagagacccttgggaagtggcccatcggtgacctcgcttttgggattagcttcctcctcaagaggcaggttggtaaccattcctttgttgctaataaacatgcatctttgtaatttgtactacttaataattgtaagctaatagggtctgcttccatgatttatcttgcaaatattgtagtgattataatatggtgcagtgtgcatttatattagctttgttagcataatggggctcttcaattttgttaaactaaaagtaaaataattttggaaacactttatcctagcctataaattgatttgacgatctgaacagctcgcagatcatttacctcatattattcaatctgtattattggctttttgtcttgaacatctgatataagtaaagggagaaggtgctccatacaaccctgcaaaattttacccctctccggaacaacaatttctggtagaagtacatgaaggatttttgtagtatggataaaaaaaaattatggtatcattgaaagaagccctttatgtatatatcatttcatgggaacatatcctgtacacaagccttctcgtgtaaacactgtgcccaccaactaacaaattttataaaaaaatctagaaaaaaatgtacaagtacttccaatagtattacacttatatgcaaagtcttaacctcaaatcaatatattttagccgtgacagaaaagataaaaactcttgacagttttgagagtataaatctgttagaaatttgtctctttttttttgctcactatatataatgaatttgaaaatgagactttacagatagatgtaatactactaaaagtacatatacatttttttttttgaatttttggtgacatgttttagtatatatgagaagacttgtgtgcataggatatgttccctcatttcactccattaaatttacccccattccttttgtatgttaccatccacaatgctgcccatcctaaatacatacaactgaaagcatattttttacagcataaaactaatctgtagtgcacaccggcacacacacacttcagcagagtttctgatccactggttgtgacatgtgttccaggggaatgtacctgtagcaagcatatatgctggagatgatagtgtggagctcaatggagctccagtaattgctgacttaaagcatcatttaaatttgttgacactatgttggcatttctccaagaagccgttcccgttgtttttggaggcgactggctactcttcggaggatgttcttatgcaagagcctaaagcaggagtgagtgaattttacctgtgtttctttaggggtatctcttctcttgctgattctgcattcctgtaatatttcacaaggaaaaaagtgcctactttgcattgatctggtgtttttcttgggatccttgcagattttgaagccagctttcaccattatacttgatagagacaagcaatgtatacttctattaattaggggaacccacagcatcagggacacactaacagcagccactggtgctgtggttccattccaccatactattgtacaggaaggtggtgttagcgatttagttttagggtacgcgcactttgggatggttgcagcagctagatggattgcaaagcttgcagccccttgtcttgctcaggcattgcatactcatccagattataaaataaaggtacagcgctttgcactgtttttgtgctctcctacccactgttgtaatagtgctgaacgtcgtatcagcacaaccatttagagacggatgcacttattctgtattgtgttcatggtaaatttgtatagattgttggacattcacttggtggtggtacagcagctctgttgacatatgtcctgagggaacagcaggagtttgcatctactacttgtgtctcctttgctccaggtatgtgtgctatgatgtttttctgagagttatcttgctgcacactgaacaatgaaaattgaaaatactgctttgtcacttttccttattccactggccatctcctttgttaacataaacctgcatctcatgcagtaaacattataggataacggactagatatctctttgacgaataagttcttttttctttgggtatttgaaacgtgcatcttaatattttggggcagaaaagtaaacatgtttttttcctcacgtttgagtacaatggttccaatccttatctttttagatcaacttatggtgtagatagtgatttaatgatcttaagattgaaactgctattgtttggagctatcataaacataattgttgtctacctagaatctcatataaacttaactcttcttccccaattctcattggaagcttacttttgattctcctagaagttaggcctgtcgaatctaatagagccatgtgcatatttgcatcttaagaacatggagttttttccactgcaaactccgaacaaaatgttgatggactaccatatctccaatacagaagttgcaatattgggattgatttattgttttgttgatgctctattttgcagctgcttgtatgacatgggatctggcagaatcaggagtgcattttatcactacagtcatcaatggagctgatctggtgccaaccttttcagctgcatcagtagacgatcttcgttcagaggttttttttgcattctattgatttattctctgcagtggaacatagtattacagctagtcttatcagcttatcaactgtcaacaggattgttgtaattgatatgagttcttattcttgttgaagtagatataagatataatagtcatagttaagttgcataaaaaatatctttttttttcatgtctgtagggatgtttgtatatcgtcatagctcacaataatgccatttttgtaataaaataactcctgcttttttcaaaatataaaatagaagttattgcatacaggttactgcatctgcctggttaaacgatctgcgccaccaaatagagcaaaccagaattctgagcactttctatcgatctgcgtcagccttgggatcaagacttccttcaatagcaaatgccaaagcaagagtagctggtgctggtgctatcctaagacctgtatctaccgggacacaggttgcctccatagctttgttctcgctaagttcaaatacatttatgttatccttgactaataatgttggctatgtatccttatggtcaggttgtaatgaggagagctcgtagtgtagcacaagcagcttggacaagaccagcacttcagctatcctcatggacatgtattggcccaaggaggcgaactaatactgtatccacttcaacagtaacatcagaagaaataagagcaacaacaaatgatggctctgagtccacttctctgttgactgaaaccacagagatagttaaaactgaaaccatgcagtttgcttcatcagaagaggttcagagttcgagtgaggtgtcagatgctgttggaatgatggatgagaaggtagatagtgacggtgaggacatcattgatcaccatgtggatgaggacaggatgactgacgtagagctgtggcagcaacttgaaaatgagttgtaccgaaggagtgaagatgacgaaatagtggaggatatgactgaaagtgctattactgaagaggtgggtggcacagctgaagatgtgctcagtgagaccaatgacaaggaggtacatagattttatcctccaggaaaaatcatgcatatattaacttccaccatagaggaaacagtcagtgccgaagagtcgagcgtgcctcatgaagatgacacgaccggtgattcggacaccagaataggcatcttcttgaccccaaggtcattatatggcaaactgaggctttcaaaaatgatgattaacgatcattacatgcctatatatagaagaaatattgagcagttgatcgctgagcttgagaaggattcgtcattcccagtcagtgattgtcttgacagtgaagttccctagtttgacacatacatatatgtagttccagctgttgtaaacgctgatgcaatagaatgatagtttcgttaagtgtatctaacatcctctggaataattacagaattctcaggtccctaatcacaaggcaccacaaacgttgccctatttcttacaaactcaaggaccatttctgttacgcaaagaaatttctacctttttttcgtttagaggatgtgaaattatttaagggattagctatacaactttgaacggaaaatttccctaaaatctattaaatgtaattatagtat</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0780700, RefSeq:Os02g0780700