Os02g0787600

From RiceWiki
Revision as of 19:24, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0787600

Description

Ionotropic glutamate receptor family protein

Version

NM_001054878.1 GI:115449126 GeneID:4330959

Length

6855 bp

Definition

Oryza sativa Japonica Group Os02g0787600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:34355999..34362853

Sequence Coding Region

34356038..34356326,34359162..34360468,34360909..34361221,34361558..34362615

Expression

GEO Profiles:Os02g0787600

Genome Context

<gbrowseImage1> name=NC_008395:34355999..34362853 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:34355999..34362853 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaggcggtcctgcttcttcttcctcctcccgctcctggttgcggcgctcgcggggagcccggtggtcacggcccagcggaatgcgctgccggcggcggcggcggcggcggcgagcgtccgggtcggggtgatcctgaacttgacgtcggcggtcggggtgaggcggcgggtcggcatccagatggcggtggaggactactacgccgcgaaccccgggtcggcgacgagggtggagctccatttcagggactcggccggggacgtcctccccgccgcttccgccgcggtggacctgatcaagaatgtgcaggtgcaggccatgatcgggccaccgagctcggcagcgaccgagttcgtcgcccacatcggcagccactcccgcgtccccgtgctgtcctactccgccacctcgccgtcgctgtcccccgcgcagacgccgttcttcgtgcgcgccgccgtcaacgactccttccaggccgcgcccgtcgccgccgtcctcgacgccttccgctggcgcgccgcggccgtcgtgtacgaggactcgccgtacgggagcggcatcctcccggcgctcgccgacgcgctgcagggcgccggcgccaagatcatggaccgcacggcggtgcccgtcgacgccaccgacgaccgcctcgacgcgctgctgtaccgcctcagggcgatgccgacgcgcgtgttcgtcgtgcacatgctccacaacgtcgccgggaggctgttccgccgcgcgaagatgctcggcatgatgtccgacggctacatctgggtggccaccgacggcgtcgccacgttcatggacaggttctccccggaggaggtcgacgcgatgcagggcgtggtcagcctccggccgtacgtgcaggagaccgacgccgtcaagaacttctcggcgcggttcaaggcgaggctacgccgggatcaccccaccgtcgacgatgtccgtgagccgaccgtcctgaggttctgggcgtacgacacggcgtgggcgatcgccgcggcggcggagtcggccggtgtcgccggcccggcgttccagacaccgcagacgagcgcgccactgacggacctggaccggctcggcgtgtcggccaccggcacggcgctcctcaacgccgtcctgagcacgacgttcgacgggctcgccggcaagttcaggctcgtcgacgggcagctccagccgccggcgtacgaggtcgtgaacatcatcggcaagggcgccaggacggtcgggttctggacgccggagttcgggatcacgcaagacctgaacgccggcagcgccaagacgctgaggcaaatcctctggcccggcgagccgcgcgacacgccgagaggctggaccgtgtcgccgagcgggctgccgctccgtgtcagcgtgccgacgaagcggggcttcacgcagttcgtcgacgtcggcaacgtcacggcgaccgggcggcgaaacatcaccggctactgcatcgacgtgttcgacgaggtcatgaagattatgccctatccggtgagctacgtgtacgacccttaccccgatagcccggaatcttacgagaagctcgtcgaccaggtgtcgtcacagaaggcagatgcggtggtgggggatgtgacgatcacggcgagcaggatggaggaggtggacttcacgatgccgttcacggagtcggggtggtcgatggtggtggcggtgcagaaggagacgagcacgagcatgtggatcttcctgcagccgctcaccaccagcctctggctcgccagcctcgccttcttctgcttcaccggcttcgtcgtctgggtgatcgagcaccgcatcaacgaggagttccgcggcacgccatggcagcagttcggcctcatcttctacttctccttctccaccctcgtcttctcccacaaggagaagctggagagcaacctgtcgaggttcgtggtgatcatatgggtgttcgtggtgctgatactgacgtcgagctacacggcgagcctgacgtcgatgctgaccgtccagaagctgcagccgacggtgaccgacgtgagggagctcctgaggcgaggcgactacatcgggttccaggaggggaccttcatcgtgccggtgctcgagaagatgggcttcgaggggaggatgaggagctacagcacggtggaccagtacgccgacgcgctgtccaaaggctcggcgaacggcggcgtcgccgccatcttcgacgagatcccctacctcaagctcttcctctcgcagtactgcaacggctacaccatggtcggaccaatctacaagaccgacggcttcgggttcgtgttcccgagagggtcgccgatggtggcggacgtgtcgcgggcgatcctgacgctggcggagggggagaagatggcgcagatcgagaagaagtggttcggcgagcccggcgcgtgccagagccagggcagcgccgtcggctcgtcgaacctcagcttccggagcttcggtgggctgttcctcatcaccggcgtggtcaccagcgccatgctcctcatctacctcgccgtcttcttctaccgcgagcgcgacgagctccgtgcggcggaggcggccgccgccgcctccggctccggctccggctccgggagccggtcgctgcggcggctgcgcgcgtgggcgcggcactacgaccagaaggacctcaagtccccgacgttcaagaggaggtggagcgacgagtccgtgaggaatggcagcgagtacgccgcgagccggacgccgaggtggggcgacgagagcccgtgcaacgtcgccggcgccgccgacgccgacgccggacggatcccggaggaagtcgtcggcggcatgagcccgttcagcatctccacgagctcggaggagaggaacggcgccgtgtctccggcggcggcggagttcgataactcgtccgatcgggcagcggtggtggcgggaacatctcaaccgcggtag</cdnaseq>

Protein Sequence

<aaseq>MARRSCFFFLLPLLVAALAGSPVVTAQRNALPAAAAAAASVRVG VILNLTSAVGVRRRVGIQMAVEDYYAANPGSATRVELHFRDSAGDVLPAASAAVDLIK NVQVQAMIGPPSSAATEFVAHIGSHSRVPVLSYSATSPSLSPAQTPFFVRAAVNDSFQ AAPVAAVLDAFRWRAAAVVYEDSPYGSGILPALADALQGAGAKIMDRTAVPVDATDDR LDALLYRLRAMPTRVFVVHMLHNVAGRLFRRAKMLGMMSDGYIWVATDGVATFMDRFS PEEVDAMQGVVSLRPYVQETDAVKNFSARFKARLRRDHPTVDDVREPTVLRFWAYDTA WAIAAAAESAGVAGPAFQTPQTSAPLTDLDRLGVSATGTALLNAVLSTTFDGLAGKFR LVDGQLQPPAYEVVNIIGKGARTVGFWTPEFGITQDLNAGSAKTLRQILWPGEPRDTP RGWTVSPSGLPLRVSVPTKRGFTQFVDVGNVTATGRRNITGYCIDVFDEVMKIMPYPV SYVYDPYPDSPESYEKLVDQVSSQKADAVVGDVTITASRMEEVDFTMPFTESGWSMVV AVQKETSTSMWIFLQPLTTSLWLASLAFFCFTGFVVWVIEHRINEEFRGTPWQQFGLI FYFSFSTLVFSHKEKLESNLSRFVVIIWVFVVLILTSSYTASLTSMLTVQKLQPTVTD VRELLRRGDYIGFQEGTFIVPVLEKMGFEGRMRSYSTVDQYADALSKGSANGGVAAIF DEIPYLKLFLSQYCNGYTMVGPIYKTDGFGFVFPRGSPMVADVSRAILTLAEGEKMAQ IEKKWFGEPGACQSQGSAVGSSNLSFRSFGGLFLITGVVTSAMLLIYLAVFFYRERDE LRAAEAAAAASGSGSGSGSRSLRRLRAWARHYDQKDLKSPTFKRRWSDESVRNGSEYA ASRTPRWGDESPCNVAGAADADAGRIPEEVVGGMSPFSISTSSEERNGAVSPAAAEFD NSSDRAAVVAGTSQPR</aaseq>

Gene Sequence

<dnaseqindica>40..328#3164..4470#4911..5223#5560..6617#ggtggttgctgagagcctgatattgtgatgcgggtgtagatggcgaggcggtcctgcttcttcttcctcctcccgctcctggttgcggcgctcgcggggagcccggtggtcacggcccagcggaatgcgctgccggcggcggcggcggcggcggcgagcgtccgggtcggggtgatcctgaacttgacgtcggcggtcggggtgaggcggcgggtcggcatccagatggcggtggaggactactacgccgcgaaccccgggtcggcgacgagggtggagctccatttcagggactcggccggggacgtcctccccgccgcttccgccggtaagctcgccgcctctcccattccttgctcgaactaatcaactaactaatgatgcttagactactactagtactaatttattacgacgcctagtttgtttgacggcttgaatggatagttcgcagcgatttcctagaatcaattgctgatggcctgattagctatgctctgctctgctcatatgtgggtgaatttgcacaaaacgtcgaaaatatctgcaaatttaaggagtttttttgttcgttttatatagtcgcgtgtgggtttgagtcctttgtaatccgagccagtagatgttgttcgtacgtatatgtctacatcgcatgatgcataagcatcttgatgcagatgatgcaaaaaaaaaaaaaaagcttcatagctgccattgtcatgttgtattgtcaactgtgctcctgaaattatgtagatatgtacgttcttttgtttggctgtcgctgatactcccttctatcataatagtttctcttgaaaacgttgaattaaaacccttattaagcttttgcaatgatatgctcgcatgcaaagggtcttgttgtcttccttgatgctgacccaactgatgttgtcaagagaatatgccaccttgtcttcaaatcaacgccggaacaggaggacagattagacattaattaattgtttttggtaatcccatttctgtattaggatctcagctaatcagtcttatattgttctgacatttctaacctcgaatccactagtcatagacccccaactctcacgtacaattgtactccctccgtttcaaaatgtttgacaccgttgactttttagcacatgtttgaccgttcgtcttattcaaaaaattttgtgaaatttgtaaaactatatgtgtacatgaaagtgtatagttaacaatgaatcaaatgatatgaaaataataaataattacttaaattttttgaataagacgaatggtcaaatacatactaaaaagtcaacggtgtcaaatattttgaaacggagggagtatatactatcagttttgtcagagtagatacgtgtctatatgagatatgcttgtttagagacctccattgctacttgtctacaatatgctacagctccatgcatgatgcatgtcgccttctaatttgtttaatcacttcgagttggactagtagtcatctctacccattaaaatcacgatggcacgtaccaacgatttggtccggtttatggtgttcaaaccaggcttgatttgagtcaagtgtcaagtacacgaaatcttgatgcttgaattgtttagctggtcacaagttctatataaagtcttcctcgaaataaattgtctcgtcacaaaatgtcagtggccatgaaggacatgacgattatattaataaaatttaaggatgcgaagaggacgttttaaaatgtcaatccctttcgttgctgacctaaaactctcgcatacgtccttaagttgtaaaactgaatctaatttccgaatgtaagcagataattctaaccaagtaacttcgatcagctgacaacgatattgagaagattttagctgaagatgcagacgtctgtgtgagtatgtgtagtgtagggataagagaaacctgtgccatttgcgcgttttgcgcgatcggatttggacgacgtggagttctgaattttccaaagcgtgtggagtgaggccattggctccagcatagaccatagacttactgtagagatggtcaagtgcagtttttaatggccctgaaaaaatgccataatttgtatagatatacaaggtccttttcagtttgtgacaagtcgttcttttgtctattagtatcacatgtcagcacccagcagtagcattcatgaaaactgtgtagtgtacactgtaccattgcttctactgtactcctaagttctaactggagtagaattatctggtagggtaatattatgagtcatcgtatgatcaagactgccaattgtgttagtgtataattatctggtagggtaatattagtgtagactgtgtattatcaggaggactgaaggaacaaaatagaatcgtagttgcagtccagtcaccccagactctgctttgcacctaagctactccctccgtcccataatataagagattttgagtttttgcttgcactatttgaccacttgtcttattcaaaaaaaatttagaattattatttatttattttgacttactttattatctaaagtactataaacataacttttcgttttttatatttgcacaatttttttgaataagacgagtggtcaaacaatacaaacaaaaactcaaaatcccttatattatagaacggagggagtaccatttttgcctgatctggtctaaatctgggtcaaggaacgtctcaccgaaagaagaacctggtgttctttctttaggttttgatgcccaatatctgttcataccaatttgttcaaatcaagcatcgaaccccactgaatagttgcttttgttttgattcttctgttatgtagagttgttcatcttttaagattttttttttaaaaaaagaaagccatatcaatgaaatgatctaatttcgaaaaaataactgattagaatgctagaaatgacttgacttcgcaccagtaatcaataataagtgatatgcatcaagttgattaatgatgcaataaacggtatcaaaactcttttcacaattgatagtctcaagaactgtcagattagaagctgaaataactgtcagatcaacaactttcataattgatagtctcaactgcgaaattcttggctccaatttctgagcggctgctcgttgttgttgctgtcgttgcagcggtggacctgatcaagaatgtgcaggtgcaggccatgatcgggccaccgagctcggcagcgaccgagttcgtcgcccacatcggcagccactcccgcgtccccgtgctgtcctactccgccacctcgccgtcgctgtcccccgcgcagacgccgttcttcgtgcgcgccgccgtcaacgactccttccaggccgcgcccgtcgccgccgtcctcgacgccttccgctggcgcgccgcggccgtcgtgtacgaggactcgccgtacgggagcggcatcctcccggcgctcgccgacgcgctgcagggcgccggcgccaagatcatggaccgcacggcggtgcccgtcgacgccaccgacgaccgcctcgacgcgctgctgtaccgcctcagggcgatgccgacgcgcgtgttcgtcgtgcacatgctccacaacgtcgccgggaggctgttccgccgcgcgaagatgctcggcatgatgtccgacggctacatctgggtggccaccgacggcgtcgccacgttcatggacaggttctccccggaggaggtcgacgcgatgcagggcgtggtcagcctccggccgtacgtgcaggagaccgacgccgtcaagaacttctcggcgcggttcaaggcgaggctacgccgggatcaccccaccgtcgacgatgtccgtgagccgaccgtcctgaggttctgggcgtacgacacggcgtgggcgatcgccgcggcggcggagtcggccggtgtcgccggcccggcgttccagacaccgcagacgagcgcgccactgacggacctggaccggctcggcgtgtcggccaccggcacggcgctcctcaacgccgtcctgagcacgacgttcgacgggctcgccggcaagttcaggctcgtcgacgggcagctccagccgccggcgtacgaggtcgtgaacatcatcggcaagggcgccaggacggtcgggttctggacgccggagttcgggatcacgcaagacctgaacgccggcagcgccaagacgctgaggcaaatcctctggcccggcgagccgcgcgacacgccgagaggctggaccgtgtcgccgagcgggctgccgctccgtgtcagcgtgccgacgaagcggggcttcacgcagttcgtcgacgtcggcaacgtcacggcgaccgggcggcgaaacatcaccggctactgcatcgacgtgttcgacgaggtcatgaagattatgccctatccggtgagctacgtgtacgacccttaccccgatagcccggaatcttacgagaagctcgtcgaccaggtgtcgtcacaggtcagtacatgccaaagttcaagagttcttgagacaatctgttcgtttgatttgttcgatcagagggacgtggattttcacccactcgttgtttacatattatctaaatagttagcaattttttttaaaaaaaatgataacatggatgaatatgaaatatatcactccacaaacatgcaatatcaaattcgatttttgttagttgaaaaaaaacaaattaaattgaaaatagttgtagctcattcacatatgtatttgttatttttgttgcaacttgtagaagctgaattttaactgtatgtttgtggagtgatatatttaatactaatctatattgccaatttttttaaaaaaaaattataactatttagatgacatatacgaagtatgaaatcactttacccgatcagagtggttgaattgcaatgtttggtttgcagaaggcagatgcggtggtgggggatgtgacgatcacggcgagcaggatggaggaggtggacttcacgatgccgttcacggagtcggggtggtcgatggtggtggcggtgcagaaggagacgagcacgagcatgtggatcttcctgcagccgctcaccaccagcctctggctcgccagcctcgccttcttctgcttcaccggcttcgtcgtctgggtgatcgagcaccgcatcaacgaggagttccgcggcacgccatggcagcagttcggcctcatcttctacttctccttctccaccctcgtcttctcccacagtacgtgcttgcatcctccttttcttctctagctcatttctactccctccatctctaaatatttaataccgttaacttttttaagcatgtttaatcgtttgtcttattcaaaaacttgagtagtagtactatatttaacaatgaatcaaatgatatgaaaataattaataattacttaattttttaaataagacgaatggtcaaacatgtttaaaaaagtaaaacatgtttaaaaaagtgaacggtgttaaatatttagggatggagggggtactttctactaccaattcagcaacatgatttttgagtggcgatttcaattgtgtgtttttttagaggagaagctggagagcaacctgtcgaggttcgtggtgatcatatgggtgttcgtggtgctgatactgacgtcgagctacacggcgagcctgacgtcgatgctgaccgtccagaagctgcagccgacggtgaccgacgtgagggagctcctgaggcgaggcgactacatcgggttccaggaggggaccttcatcgtgccggtgctcgagaagatgggcttcgaggggaggatgaggagctacagcacggtggaccagtacgccgacgcgctgtccaaaggctcggcgaacggcggcgtcgccgccatcttcgacgagatcccctacctcaagctcttcctctcgcagtactgcaacggctacaccatggtcggaccaatctacaagaccgacggcttcgggttcgtgttcccgagagggtcgccgatggtggcggacgtgtcgcgggcgatcctgacgctggcggagggggagaagatggcgcagatcgagaagaagtggttcggcgagcccggcgcgtgccagagccagggcagcgccgtcggctcgtcgaacctcagcttccggagcttcggtgggctgttcctcatcaccggcgtggtcaccagcgccatgctcctcatctacctcgccgtcttcttctaccgcgagcgcgacgagctccgtgcggcggaggcggccgccgccgcctccggctccggctccggctccgggagccggtcgctgcggcggctgcgcgcgtgggcgcggcactacgaccagaaggacctcaagtccccgacgttcaagaggaggtggagcgacgagtccgtgaggaatggcagcgagtacgccgcgagccggacgccgaggtggggcgacgagagcccgtgcaacgtcgccggcgccgccgacgccgacgccggacggatcccggaggaagtcgtcggcggcatgagcccgttcagcatctccacgagctcggaggagaggaacggcgccgtgtctccggcggcggcggagttcgataactcgtccgatcgggcagcggtggtggcgggaacatctcaaccgcggtagatgtacatgtgacatggcaagttctcccagtagacgtgtccggtaggatatgaacattgacaggtcaagtacaagtagtgtgcaaccgtctcctcgcctgtagatagatcctagtactactgtactactaccagtagatgagaaattcagcaacttgaccgatgaagcattggcagtggctttgtaaagtgtaatatggcaacaataatatgtgattaatgtagatgtattttgggaa</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0787600, RefSeq:Os02g0787600