Os02g0806900

From RiceWiki
Revision as of 19:25, 22 July 2012 by 124.16.129.48 (talk)
Jump to: navigation, search

Please input one-sentence summary here.

Annotated Information

Function

Please input function information here.

Expression

Please input expression information here.

Evolution

Please input evolution information here.

You can also add sub-section(s) at will.

Labs working on this gene

Please input related labs here.

References

Please input cited references here.

Structured Information

Gene Name

Os02g0806900

Description

Aminotransferase, class I and II domain containing protein

Version

NM_001054986.1 GI:115449374 GeneID:4331075

Length

3967 bp

Definition

Oryza sativa Japonica Group Os02g0806900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 2

Location

Chromosome 2:35349901..35353867

Sequence Coding Region

35350333..35350444,35350542..35350636,35350748..35350839,35351246..35351339,35351414..35351486
,35351590..35351722,35352123..35352297,35352385..35352525,35352725..35352820
,35352917..35353058,35353321..35353448,35353547..35353711

Expression

GEO Profiles:Os02g0806900

Genome Context

<gbrowseImage1> name=NC_008395:35349901..35353867 source=RiceChromosome02 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008395:35349901..35353867 source=RiceChromosome02 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatggtgttgccagtcgcgaacgcgactgctgcagcacttgcgcgggtttctgctatgttcaatgccccgcttgctcgtgctgttgtctttgggattcatatcgatgggcacttggtcgtcgaagggcttctcattgccgcaatactcttccagctctccaggaagagctacaagcctccaaagaagccactcactgagagggaggttgatgagctctgtgatgagtggcaaccagagcctctctgcccacccatcaaggagggagctcggattgaggctcctacattagaaagtgctgctggaccgcatacaattgttgatggaaaagaagttgtaaactttgcgtcagcaaactaccttggtttgattggcaatgaaaagatactcgattcctgtattggttcggtggagaaatatggcgttggatcatgcggacctcgtggcttttatggaacgattgatgttcaccttgactgtgagactaaaattgcaaagttcctgggaacgcaagattcaatcttgtactcctatgggatatcaaccatcttcagtgtgattcctgccttttgtaagaaaggagatataattgtagctgatgagggtgttcattgggcagtacaaaatggtttgcagctttcaagaagcactgttgtttatttcaagcacaatgacatggcttcacttgcgagcactctggaaaaactaactcatggaaacaaacgtacagaaaagattaggcgctatattgttgtggaagctatttaccagaattctggccaaattgcacccttggatgagatagttcgattgaaggagaaataccggtttcgtgttattttggaggagagtcattcttttggcgttcttggcaagtctggacgtggccttgctgaacattatggagttcctattgaaaaaatagacattatcactgctggaatgggaaatgcattagctactgatggtggtttctgtacaggaagtatcagagtggttgatcatcagcgtctaagcagctccggttatgttttctctgcctcgttaccaccatatcttgctagtgcagcaatttctgctgtggaccacctggaggagaacccatcggttcttgccaatctaagatcaaacatcactcttctgcataaagagttgtcagatgtacaggggcttgaaattgctagtaatatattgtcacctattgtcttcctcaaattgaagacatcaacaggttctgctgttgctgacctggagctccttgaggttatttcagagaaggtattgaaggaagattcagtcttcattgcagcgacgaaacgatcgagtttggacaagtgtcgtcttccggttggaatccgcctattcgtatcagctggtcacactgaatctgatatcctcaaagtatctgaatccctgaaaagggttgcagcatcagtgctctag</cdnaseq>

Protein Sequence

<aaseq>MEMVLPVANATAAALARVSAMFNAPLARAVVFGIHIDGHLVVEG LLIAAILFQLSRKSYKPPKKPLTEREVDELCDEWQPEPLCPPIKEGARIEAPTLESAA GPHTIVDGKEVVNFASANYLGLIGNEKILDSCIGSVEKYGVGSCGPRGFYGTIDVHLD CETKIAKFLGTQDSILYSYGISTIFSVIPAFCKKGDIIVADEGVHWAVQNGLQLSRST VVYFKHNDMASLASTLEKLTHGNKRTEKIRRYIVVEAIYQNSGQIAPLDEIVRLKEKY RFRVILEESHSFGVLGKSGRGLAEHYGVPIEKIDIITAGMGNALATDGGFCTGSIRVV DHQRLSSSGYVFSASLPPYLASAAISAVDHLEENPSVLANLRSNITLLHKELSDVQGL EIASNILSPIVFLKLKTSTGSAVADLELLEVISEKVLKEDSVFIAATKRSSLDKCRLP VGIRLFVSAGHTESDILKVSESLKRVAASVL</aaseq>

Gene Sequence

<dnaseqindica>433..544#642..736#848..939#1346..1439#1514..1586#1690..1822#2223..2397#2485..2625#2825..2920#3017..3158#3421..3548#3647..3811#gcgccgccgatgcggaatcgcggatgcggtccacccgcagatctccgaccatcagcccaacccacggtttccccgccctccacaccccaacctcgtccgctccgtcgccgacgacgactgcctcctaccccatgtatataacccccgccactcctctcgatgttgaggtaaatcgagtgagtccgcaagtcgttcgcgattcttgatcgagatctgtcagggtgataaaggtaacggtctttcggctgtgtcttaggattagatccaactgtttctgtgcttggaacagttgcagagaaactgtagtttcttggatcagtttgtcgagtttgttttggtggatttagcatctcgttcttttgtttttttgtacaggtttagaacggtgctgagtttgttaatcttgggagaaaagggaaactgctctcgagtatggagatggtgttgccagtcgcgaacgcgactgctgcagcacttgcgcgggtttctgctatgttcaatgccccgcttgctcgtgctgttgtctttgggattcatatcgatggtaaatgatatttattttctccagcagctaagaaattctggagttgtatcgtgtttcatttaaattatgcgctatgcgctgattctgtgattttcagggcacttggtcgtcgaagggcttctcattgccgcaatactcttccagctctccaggaagagctacaagcctccaaagaagccactcactgagagggtgagctacactttgctcaataatttggaattagtagttttttctgttcctttccatttcttaatgcttcatcaattgtgttaatcaggtgttttttttttggctcaacaggaggttgatgagctctgtgatgagtggcaaccagagcctctctgcccacccatcaaggagggagctcggattgaggctcctacattagaaaggttcgtctcaattctcaagccccatcccctcccaacaaagtagacatttctaattagtccttcatgtcaccagtaaagtgttttatgtgcttcaccaaaggctctatgttgcaatgtacttctttctttcttttttttttaaaaaaaaaagattgcatgggttcagtttgtagccatttcatttagtaaggattagggaagtcggtatataagcattgttgtacacttatactatgatactatgacctagtgagcatggaatatgggtgttgatctccagagcttgttagttctagaattacaaccaaactatgatttagagttcacacaattatagctatggttccccactatctttgtaccaagaccgagaggattgaatactgatattctattgtttgatcagtgctgctggaccgcatacaattgttgatggaaaagaagttgtaaactttgcgtcagcaaactaccttggtttgattggcaatgaaaagatactcgtaagaacctcatgcttttgctaatattctttagtactcttttagaacatttgagtgatgtaaggaaattgcaggattcctgtattggttcggtggagaaatatggcgttggatcatgcggacctcgtggcttttatggaacgattggttcgtaatgttctgttacaacttatattcaatactttgtatcttgtggccaaaagcctaatgcaaattcaggggaggaacttagccattttgttgttttcagatgttcaccttgactgtgagactaaaattgcaaagttcctgggaacgcaagattcaatcttgtactcctatgggatatcaaccatcttcagtgtgattcctgccttttgtaagaaaggagatataattgtagcgtaagtgaacctttttcctcctgtttacaacaatttagtaacatattattcaacattttctaatgaattgagtcgtgccataccatctgatgtaaaatgaacatagatattttattgtagttctggaaattcgtagaattggtaatatggtatcatggacctcgctaatccttctgtgttattgacaaacctacttgaccttctagccatcatgcatttttgaaactcataatttcgaaatggtgaattctttttttttatgcgtgctttcagtccttatatatctcttttcattgttcatatttaaaattattagctagtttttgcatccagaaaaaaaataattcagtatggccacgttcttcataaaaataaatcttgatattcatatgcaatgcagtgatgagggtgttcattgggcagtacaaaatggtttgcagctttcaagaagcactgttgtttatttcaagcacaatgacatggcttcacttgcgagcactctggaaaaactaactcatggaaacaaacgtacagaaaagattaggcgctatattgttgtggaagctatttaccaggtttgtagcttactcatgaattcttttttgctgagaaatacattgactgaatttgtttctaaagtctgtctactgttctggatacagaattctggccaaattgcacccttggatgagatagttcgattgaaggagaaataccggtttcgtgttattttggaggagagtcattcttttggcgttcttggcaagtctggacgtggccttgctgaacattatggagttcctgtgagtgctccctctcatttcttttcatatatttccacaacagcgaatctgaaacaacaaataaagaactgggcaggcataatcagtggctcagtagacaaagtgcaatttgtattaagaaaatcttccttgttgactagcttagtttgctgcacaattgagttctactagttttctaagtattctttaccgattgcagattgaaaaaatagacattatcactgctggaatgggaaatgcattagctactgatggtggtttctgtacaggaagtatcagagtggttgatcatcaggtaggtgccacatcagatcgatagcatattgatgatggtatagaaatacctgcatcttcagtatttttaactggctgtactgttgtcatcttgcagcgtctaagcagctccggttatgttttctctgcctcgttaccaccatatcttgctagtgcagcaatttctgctgtggaccacctggaggagaacccatcggttcttgccaatctaagatcaaacatcactcttctgcataaaggtcactaattctcttggcacctttatttcttgcttccattaatttaccgaacatagtgcactggtaatatgttactaacctagtttataaaactgtgatgtacttactatgggctatagtcaaagtaccgaaaatacacaatgtttagcatccttacaagtattttgatgtacttgtgatatcaaaattttaggaaacgtctggcatatttcgctgtatatttgtccatccactcatcttttcatttgcatttgatgcgcagagttgtcagatgtacaggggcttgaaattgctagtaatatattgtcacctattgtcttcctcaaattgaagacatcaacaggttctgctgttgctgacctggagctccttgaggttatttcagagaaggtatttagtggtggattcaacaaattcgtgaaaagcacttgagatttgatttttggagttaagccaataatgtattttacgtaattgtaatttcacaggtattgaaggaagattcagtcttcattgcagcgacgaaacgatcgagtttggacaagtgtcgtcttccggttggaatccgcctattcgtatcagctggtcacactgaatctgatatcctcaaagtatctgaatccctgaaaagggttgcagcatcagtgctctagtgacaaactgacaaccttgcatctggcatgatgtgttctacagttacgtacaaatctgtatgctcgttgatctggctcaatttgctgtcgtgtctagcagaattacaaataaaattttgtaaaacagtttgaattaaaatatctggtagttttgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os02g0806900, RefSeq:Os02g0806900